Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1681:A1693
Extra
PDB:
ATOM 1 O3' G A1680 -39.593 -8.341 -26.097 1.00 9.65 O
ATOM 2 P U A1681 -40.538 -7.698 -24.989 1.00 2.60 P
ATOM 3 OP1 U A1681 -41.532 -6.877 -25.726 1.00 2.60 O
ATOM 4 OP2 U A1681 -39.658 -7.048 -23.968 1.00 2.60 O
ATOM 5 O5' U A1681 -41.250 -8.964 -24.357 1.00 2.60 O
ATOM 6 C5' U A1681 -42.239 -9.649 -25.087 1.00 2.60 C
ATOM 7 C4' U A1681 -42.929 -10.680 -24.250 1.00 2.60 C
ATOM 8 O4' U A1681 -41.980 -11.681 -23.810 1.00 2.60 O
ATOM 9 C3' U A1681 -43.550 -10.192 -22.959 1.00 2.60 C
ATOM 10 O3' U A1681 -44.774 -9.517 -23.143 1.00 2.60 O
ATOM 11 C2' U A1681 -43.699 -11.478 -22.187 1.00 2.60 C
ATOM 12 O2' U A1681 -44.835 -12.201 -22.664 1.00 2.60 O
ATOM 13 C1' U A1681 -42.417 -12.226 -22.592 1.00 2.60 C
ATOM 14 N1 U A1681 -41.342 -12.066 -21.613 1.00 2.47 N
ATOM 15 C2 U A1681 -41.109 -13.075 -20.704 1.00 2.47 C
ATOM 16 O2 U A1681 -41.764 -14.083 -20.648 1.00 2.47 O
ATOM 17 N3 U A1681 -40.083 -12.869 -19.831 1.00 2.47 N
ATOM 18 C4 U A1681 -39.253 -11.769 -19.803 1.00 2.47 C
ATOM 19 O4 U A1681 -38.348 -11.704 -18.963 1.00 2.47 O
ATOM 20 C5 U A1681 -39.548 -10.777 -20.788 1.00 2.47 C
ATOM 21 C6 U A1681 -40.556 -10.962 -21.644 1.00 2.47 C
ATOM 22 P A A1682 -45.249 -8.472 -22.030 1.00 2.81 P
ATOM 23 OP1 A A1682 -44.892 -7.129 -22.509 1.00 2.81 O
ATOM 24 OP2 A A1682 -44.677 -8.922 -20.745 1.00 2.81 O
ATOM 25 O5' A A1682 -46.830 -8.642 -22.015 1.00 2.81 O
TER
ATOM 1 O3' G B1692 -39.198 -17.380 -17.369 1.00 0.01 O
ATOM 2 P A B1693 -39.215 -15.903 -17.926 1.00 0.01 P
ATOM 3 OP1 A B1693 -38.464 -15.898 -19.159 1.00 0.01 O
ATOM 4 OP2 A B1693 -38.812 -15.027 -16.837 1.00 0.01 O
ATOM 5 O5' A B1693 -40.727 -15.690 -18.237 1.00 0.01 O
ATOM 6 C5' A B1693 -41.412 -16.618 -19.030 1.00 0.01 C
ATOM 7 C4' A B1693 -42.649 -17.116 -18.354 1.00 0.01 C
ATOM 8 O4' A B1693 -43.602 -16.039 -18.222 1.00 0.01 O
ATOM 9 C3' A B1693 -43.376 -18.198 -19.116 1.00 0.01 C
ATOM 10 O3' A B1693 -42.853 -19.479 -18.839 1.00 0.01 O
ATOM 11 C2' A B1693 -44.824 -18.019 -18.710 1.00 0.01 C
ATOM 12 O2' A B1693 -45.111 -18.709 -17.509 1.00 0.01 O
ATOM 13 C1' A B1693 -44.900 -16.513 -18.460 1.00 0.01 C
ATOM 14 N9 A B1693 -45.434 -15.816 -19.624 1.00 0.01 N
ATOM 15 C8 A B1693 -44.758 -15.157 -20.613 1.00 0.01 C
ATOM 16 N7 A B1693 -45.550 -14.668 -21.534 1.00 0.01 N
ATOM 17 C5 A B1693 -46.810 -15.054 -21.100 1.00 0.01 C
ATOM 18 C6 A B1693 -48.066 -14.860 -21.639 1.00 0.01 C
ATOM 19 N6 A B1693 -48.229 -14.183 -22.767 1.00 0.01 N
ATOM 20 N1 A B1693 -49.124 -15.370 -20.986 1.00 0.01 N
ATOM 21 C2 A B1693 -48.917 -16.036 -19.845 1.00 0.01 C
ATOM 22 N3 A B1693 -47.777 -16.308 -19.227 1.00 0.01 N
ATOM 23 C4 A B1693 -46.761 -15.770 -19.926 1.00 0.01 C
ATOM 24 P A B1694 -41.973 -20.241 -19.949 1.00 8.97 P
ATOM 25 OP1 A B1694 -42.006 -21.677 -19.597 1.00 8.97 O
ATOM 26 OP2 A B1694 -40.637 -19.554 -20.025 1.00 8.97 O
ATOM 27 O5' A B1694 -42.826 -19.981 -21.279 1.00 8.97 O
TER
ATOM 2 P U A1681 -40.538 -7.698 -24.989 1.00 2.60 P
ATOM 3 OP1 U A1681 -41.532 -6.877 -25.726 1.00 2.60 O
ATOM 4 OP2 U A1681 -39.658 -7.048 -23.968 1.00 2.60 O
ATOM 5 O5' U A1681 -41.250 -8.964 -24.357 1.00 2.60 O
ATOM 6 C5' U A1681 -42.239 -9.649 -25.087 1.00 2.60 C
ATOM 7 C4' U A1681 -42.929 -10.680 -24.250 1.00 2.60 C
ATOM 8 O4' U A1681 -41.980 -11.681 -23.810 1.00 2.60 O
ATOM 9 C3' U A1681 -43.550 -10.192 -22.959 1.00 2.60 C
ATOM 10 O3' U A1681 -44.774 -9.517 -23.143 1.00 2.60 O
ATOM 11 C2' U A1681 -43.699 -11.478 -22.187 1.00 2.60 C
ATOM 12 O2' U A1681 -44.835 -12.201 -22.664 1.00 2.60 O
ATOM 13 C1' U A1681 -42.417 -12.226 -22.592 1.00 2.60 C
ATOM 14 N1 U A1681 -41.342 -12.066 -21.613 1.00 2.47 N
ATOM 15 C2 U A1681 -41.109 -13.075 -20.704 1.00 2.47 C
ATOM 16 O2 U A1681 -41.764 -14.083 -20.648 1.00 2.47 O
ATOM 17 N3 U A1681 -40.083 -12.869 -19.831 1.00 2.47 N
ATOM 18 C4 U A1681 -39.253 -11.769 -19.803 1.00 2.47 C
ATOM 19 O4 U A1681 -38.348 -11.704 -18.963 1.00 2.47 O
ATOM 20 C5 U A1681 -39.548 -10.777 -20.788 1.00 2.47 C
ATOM 21 C6 U A1681 -40.556 -10.962 -21.644 1.00 2.47 C
ATOM 22 P A A1682 -45.249 -8.472 -22.030 1.00 2.81 P
ATOM 23 OP1 A A1682 -44.892 -7.129 -22.509 1.00 2.81 O
ATOM 24 OP2 A A1682 -44.677 -8.922 -20.745 1.00 2.81 O
ATOM 25 O5' A A1682 -46.830 -8.642 -22.015 1.00 2.81 O
TER
ATOM 1 O3' G B1692 -39.198 -17.380 -17.369 1.00 0.01 O
ATOM 2 P A B1693 -39.215 -15.903 -17.926 1.00 0.01 P
ATOM 3 OP1 A B1693 -38.464 -15.898 -19.159 1.00 0.01 O
ATOM 4 OP2 A B1693 -38.812 -15.027 -16.837 1.00 0.01 O
ATOM 5 O5' A B1693 -40.727 -15.690 -18.237 1.00 0.01 O
ATOM 6 C5' A B1693 -41.412 -16.618 -19.030 1.00 0.01 C
ATOM 7 C4' A B1693 -42.649 -17.116 -18.354 1.00 0.01 C
ATOM 8 O4' A B1693 -43.602 -16.039 -18.222 1.00 0.01 O
ATOM 9 C3' A B1693 -43.376 -18.198 -19.116 1.00 0.01 C
ATOM 10 O3' A B1693 -42.853 -19.479 -18.839 1.00 0.01 O
ATOM 11 C2' A B1693 -44.824 -18.019 -18.710 1.00 0.01 C
ATOM 12 O2' A B1693 -45.111 -18.709 -17.509 1.00 0.01 O
ATOM 13 C1' A B1693 -44.900 -16.513 -18.460 1.00 0.01 C
ATOM 14 N9 A B1693 -45.434 -15.816 -19.624 1.00 0.01 N
ATOM 15 C8 A B1693 -44.758 -15.157 -20.613 1.00 0.01 C
ATOM 16 N7 A B1693 -45.550 -14.668 -21.534 1.00 0.01 N
ATOM 17 C5 A B1693 -46.810 -15.054 -21.100 1.00 0.01 C
ATOM 18 C6 A B1693 -48.066 -14.860 -21.639 1.00 0.01 C
ATOM 19 N6 A B1693 -48.229 -14.183 -22.767 1.00 0.01 N
ATOM 20 N1 A B1693 -49.124 -15.370 -20.986 1.00 0.01 N
ATOM 21 C2 A B1693 -48.917 -16.036 -19.845 1.00 0.01 C
ATOM 22 N3 A B1693 -47.777 -16.308 -19.227 1.00 0.01 N
ATOM 23 C4 A B1693 -46.761 -15.770 -19.926 1.00 0.01 C
ATOM 24 P A B1694 -41.973 -20.241 -19.949 1.00 8.97 P
ATOM 25 OP1 A B1694 -42.006 -21.677 -19.597 1.00 8.97 O
ATOM 26 OP2 A B1694 -40.637 -19.554 -20.025 1.00 8.97 O
ATOM 27 O5' A B1694 -42.826 -19.981 -21.279 1.00 8.97 O
TER
Atoms:
C4: (-39.253,-11.769,-19.803)
N3: (-40.083,-12.869,-19.831)
OP1: (-41.532,-6.877,-25.726)
OP2: (-39.658,-7.048,-23.968)
C2: (-41.109,-13.075,-20.704)
C1': (-42.417,-12.226,-22.592)
C3': (-43.550,-10.192,-22.959)
O5': (-41.250,-8.964,-24.357)
O4': (-41.980,-11.681,-23.810)
C5': (-42.239,-9.649,-25.087)
P: (-40.538,-7.698,-24.989)
C4': (-42.929,-10.680,-24.250)
C2': (-43.699,-11.478,-22.187)
O2': (-44.835,-12.201,-22.664)
N1: (-41.342,-12.066,-21.613)
O4: (-38.348,-11.704,-18.963)
O2: (-41.764,-14.083,-20.648)
C6: (-40.556,-10.962,-21.644)
C5: (-39.548,-10.777,-20.788)
O3': (-44.774,-9.517,-23.143)
N3: (-40.083,-12.869,-19.831)
OP1: (-41.532,-6.877,-25.726)
OP2: (-39.658,-7.048,-23.968)
C2: (-41.109,-13.075,-20.704)
C1': (-42.417,-12.226,-22.592)
C3': (-43.550,-10.192,-22.959)
O5': (-41.250,-8.964,-24.357)
O4': (-41.980,-11.681,-23.810)
C5': (-42.239,-9.649,-25.087)
P: (-40.538,-7.698,-24.989)
C4': (-42.929,-10.680,-24.250)
C2': (-43.699,-11.478,-22.187)
O2': (-44.835,-12.201,-22.664)
N1: (-41.342,-12.066,-21.613)
O4: (-38.348,-11.704,-18.963)
O2: (-41.764,-14.083,-20.648)
C6: (-40.556,-10.962,-21.644)
C5: (-39.548,-10.777,-20.788)
O3': (-44.774,-9.517,-23.143)
OP1: (-38.464,-15.898,-19.159)
OP2: (-38.812,-15.027,-16.837)
C3': (-43.376,-18.198,-19.116)
C1': (-44.900,-16.513,-18.460)
C5': (-41.412,-16.618,-19.030)
O4': (-43.602,-16.039,-18.222)
C8: (-44.758,-15.157,-20.613)
O2': (-45.111,-18.709,-17.509)
C6: (-48.066,-14.860,-21.639)
C5: (-46.810,-15.054,-21.100)
C4: (-46.761,-15.770,-19.926)
P: (-39.215,-15.903,-17.926)
C4': (-42.649,-17.116,-18.354)
C2': (-44.824,-18.019,-18.710)
C2: (-48.917,-16.036,-19.845)
N1: (-49.124,-15.370,-20.986)
N3: (-47.777,-16.308,-19.227)
N6: (-48.229,-14.183,-22.767)
N7: (-45.550,-14.668,-21.534)
N9: (-45.434,-15.816,-19.624)
O5': (-40.727,-15.690,-18.237)
O3': (-42.853,-19.479,-18.839)
OP2: (-38.812,-15.027,-16.837)
C3': (-43.376,-18.198,-19.116)
C1': (-44.900,-16.513,-18.460)
C5': (-41.412,-16.618,-19.030)
O4': (-43.602,-16.039,-18.222)
C8: (-44.758,-15.157,-20.613)
O2': (-45.111,-18.709,-17.509)
C6: (-48.066,-14.860,-21.639)
C5: (-46.810,-15.054,-21.100)
C4: (-46.761,-15.770,-19.926)
P: (-39.215,-15.903,-17.926)
C4': (-42.649,-17.116,-18.354)
C2': (-44.824,-18.019,-18.710)
C2: (-48.917,-16.036,-19.845)
N1: (-49.124,-15.370,-20.986)
N3: (-47.777,-16.308,-19.227)
N6: (-48.229,-14.183,-22.767)
N7: (-45.550,-14.668,-21.534)
N9: (-45.434,-15.816,-19.624)
O5': (-40.727,-15.690,-18.237)
O3': (-42.853,-19.479,-18.839)
Image (generated by PyMOL):