Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:13120:13087
Extra
PDB:
ATOM 1 O3' C A3119 11.214 90.697 76.311 1.00 73.40 O
ATOM 2 P U A3120 12.108 89.628 75.504 1.00 77.14 P
ATOM 3 OP1 U A3120 13.031 89.024 76.489 1.00 76.68 O
ATOM 4 OP2 U A3120 12.672 90.330 74.309 1.00 77.40 O
ATOM 5 O5' U A3120 11.050 88.542 75.036 1.00 76.60 O
ATOM 6 C5' U A3120 11.317 87.708 73.913 1.00 75.96 C
ATOM 7 C4' U A3120 10.725 86.336 74.074 1.00 75.23 C
ATOM 8 O4' U A3120 11.339 85.674 75.213 1.00 74.80 O
ATOM 9 C3' U A3120 9.219 86.286 74.331 1.00 75.48 C
ATOM 10 O3' U A3120 8.720 85.079 73.770 1.00 74.80 O
ATOM 11 C2' U A3120 9.162 86.167 75.852 1.00 75.52 C
ATOM 12 O2' U A3120 7.956 85.630 76.362 1.00 75.45 O
ATOM 13 C1' U A3120 10.314 85.220 76.075 1.00 74.76 C
ATOM 14 N1 U A3120 10.816 85.161 77.453 1.00 74.75 N
ATOM 15 C2 U A3120 10.593 83.959 78.049 1.00 74.12 C
ATOM 16 O2 U A3120 9.995 83.083 77.457 1.00 73.65 O
ATOM 17 N3 U A3120 11.052 83.810 79.326 1.00 74.07 N
ATOM 18 C4 U A3120 11.713 84.740 80.059 1.00 74.59 C
ATOM 19 O4 U A3120 12.070 84.459 81.196 1.00 74.48 O
ATOM 20 C5 U A3120 11.913 85.965 79.365 1.00 75.23 C
ATOM 21 C6 U A3120 11.469 86.145 78.117 1.00 75.29 C
ATOM 22 P G A3121 7.371 85.052 72.916 1.00 71.13 P
ATOM 23 OP1 G A3121 6.903 86.453 72.763 1.00 72.07 O
ATOM 24 OP2 G A3121 6.466 84.054 73.565 1.00 70.74 O
ATOM 25 O5' G A3121 7.880 84.499 71.522 1.00 70.64 O
TER
ATOM 1 O3' U B3086 10.190 79.814 79.050 1.00 69.94 O
ATOM 2 P A B3087 10.246 80.070 80.642 1.00 73.66 P
ATOM 3 OP1 A B3087 8.995 79.533 81.206 1.00 73.63 O
ATOM 4 OP2 A B3087 10.561 81.506 80.848 1.00 74.46 O
ATOM 5 O5' A B3087 11.465 79.169 81.122 1.00 73.00 O
ATOM 6 C5' A B3087 12.518 78.848 80.251 1.00 72.55 C
ATOM 7 C4' A B3087 13.769 78.500 81.005 1.00 72.24 C
ATOM 8 O4' A B3087 14.915 78.906 80.212 1.00 72.22 O
ATOM 9 C3' A B3087 13.942 79.184 82.361 1.00 72.76 C
ATOM 10 O3' A B3087 13.449 78.375 83.432 1.00 72.50 O
ATOM 11 C2' A B3087 15.444 79.457 82.434 1.00 72.70 C
ATOM 12 O2' A B3087 16.128 78.289 82.869 1.00 71.99 O
ATOM 13 C1' A B3087 15.797 79.684 80.965 1.00 72.61 C
ATOM 14 N9 A B3087 15.616 81.080 80.521 1.00 73.39 N
ATOM 15 C8 A B3087 14.594 81.410 79.659 1.00 73.64 C
ATOM 16 N7 A B3087 14.533 82.665 79.305 1.00 74.35 N
ATOM 17 C5 A B3087 15.610 83.225 79.970 1.00 74.59 C
ATOM 18 C6 A B3087 16.059 84.549 79.999 1.00 75.32 C
ATOM 19 N6 A B3087 15.472 85.547 79.330 1.00 75.93 N
ATOM 20 N1 A B3087 17.146 84.803 80.737 1.00 75.39 N
ATOM 21 C2 A B3087 17.717 83.788 81.389 1.00 74.78 C
ATOM 22 N3 A B3087 17.388 82.496 81.450 1.00 74.07 N
ATOM 23 C4 A B3087 16.306 82.261 80.702 1.00 74.00 C
ATOM 24 P A B3088 13.075 79.010 84.874 1.00 70.65 P
ATOM 25 OP1 A B3088 12.731 77.874 85.783 1.00 70.18 O
ATOM 26 OP2 A B3088 12.056 80.085 84.648 1.00 71.39 O
ATOM 27 O5' A B3088 14.442 79.667 85.323 1.00 70.88 O
TER
ATOM 2 P U A3120 12.108 89.628 75.504 1.00 77.14 P
ATOM 3 OP1 U A3120 13.031 89.024 76.489 1.00 76.68 O
ATOM 4 OP2 U A3120 12.672 90.330 74.309 1.00 77.40 O
ATOM 5 O5' U A3120 11.050 88.542 75.036 1.00 76.60 O
ATOM 6 C5' U A3120 11.317 87.708 73.913 1.00 75.96 C
ATOM 7 C4' U A3120 10.725 86.336 74.074 1.00 75.23 C
ATOM 8 O4' U A3120 11.339 85.674 75.213 1.00 74.80 O
ATOM 9 C3' U A3120 9.219 86.286 74.331 1.00 75.48 C
ATOM 10 O3' U A3120 8.720 85.079 73.770 1.00 74.80 O
ATOM 11 C2' U A3120 9.162 86.167 75.852 1.00 75.52 C
ATOM 12 O2' U A3120 7.956 85.630 76.362 1.00 75.45 O
ATOM 13 C1' U A3120 10.314 85.220 76.075 1.00 74.76 C
ATOM 14 N1 U A3120 10.816 85.161 77.453 1.00 74.75 N
ATOM 15 C2 U A3120 10.593 83.959 78.049 1.00 74.12 C
ATOM 16 O2 U A3120 9.995 83.083 77.457 1.00 73.65 O
ATOM 17 N3 U A3120 11.052 83.810 79.326 1.00 74.07 N
ATOM 18 C4 U A3120 11.713 84.740 80.059 1.00 74.59 C
ATOM 19 O4 U A3120 12.070 84.459 81.196 1.00 74.48 O
ATOM 20 C5 U A3120 11.913 85.965 79.365 1.00 75.23 C
ATOM 21 C6 U A3120 11.469 86.145 78.117 1.00 75.29 C
ATOM 22 P G A3121 7.371 85.052 72.916 1.00 71.13 P
ATOM 23 OP1 G A3121 6.903 86.453 72.763 1.00 72.07 O
ATOM 24 OP2 G A3121 6.466 84.054 73.565 1.00 70.74 O
ATOM 25 O5' G A3121 7.880 84.499 71.522 1.00 70.64 O
TER
ATOM 1 O3' U B3086 10.190 79.814 79.050 1.00 69.94 O
ATOM 2 P A B3087 10.246 80.070 80.642 1.00 73.66 P
ATOM 3 OP1 A B3087 8.995 79.533 81.206 1.00 73.63 O
ATOM 4 OP2 A B3087 10.561 81.506 80.848 1.00 74.46 O
ATOM 5 O5' A B3087 11.465 79.169 81.122 1.00 73.00 O
ATOM 6 C5' A B3087 12.518 78.848 80.251 1.00 72.55 C
ATOM 7 C4' A B3087 13.769 78.500 81.005 1.00 72.24 C
ATOM 8 O4' A B3087 14.915 78.906 80.212 1.00 72.22 O
ATOM 9 C3' A B3087 13.942 79.184 82.361 1.00 72.76 C
ATOM 10 O3' A B3087 13.449 78.375 83.432 1.00 72.50 O
ATOM 11 C2' A B3087 15.444 79.457 82.434 1.00 72.70 C
ATOM 12 O2' A B3087 16.128 78.289 82.869 1.00 71.99 O
ATOM 13 C1' A B3087 15.797 79.684 80.965 1.00 72.61 C
ATOM 14 N9 A B3087 15.616 81.080 80.521 1.00 73.39 N
ATOM 15 C8 A B3087 14.594 81.410 79.659 1.00 73.64 C
ATOM 16 N7 A B3087 14.533 82.665 79.305 1.00 74.35 N
ATOM 17 C5 A B3087 15.610 83.225 79.970 1.00 74.59 C
ATOM 18 C6 A B3087 16.059 84.549 79.999 1.00 75.32 C
ATOM 19 N6 A B3087 15.472 85.547 79.330 1.00 75.93 N
ATOM 20 N1 A B3087 17.146 84.803 80.737 1.00 75.39 N
ATOM 21 C2 A B3087 17.717 83.788 81.389 1.00 74.78 C
ATOM 22 N3 A B3087 17.388 82.496 81.450 1.00 74.07 N
ATOM 23 C4 A B3087 16.306 82.261 80.702 1.00 74.00 C
ATOM 24 P A B3088 13.075 79.010 84.874 1.00 70.65 P
ATOM 25 OP1 A B3088 12.731 77.874 85.783 1.00 70.18 O
ATOM 26 OP2 A B3088 12.056 80.085 84.648 1.00 71.39 O
ATOM 27 O5' A B3088 14.442 79.667 85.323 1.00 70.88 O
TER
Atoms:
C4: (11.713,84.740,80.059)
N3: (11.052,83.810,79.326)
OP1: (13.031,89.024,76.489)
OP2: (12.672,90.330,74.309)
C2: (10.593,83.959,78.049)
C1': (10.314,85.220,76.075)
C3': (9.219,86.286,74.331)
O5': (11.050,88.542,75.036)
O4': (11.339,85.674,75.213)
C5': (11.317,87.708,73.913)
P: (12.108,89.628,75.504)
C4': (10.725,86.336,74.074)
C2': (9.162,86.167,75.852)
O2': (7.956,85.630,76.362)
N1: (10.816,85.161,77.453)
O4: (12.070,84.459,81.196)
O2: (9.995,83.083,77.457)
C6: (11.469,86.145,78.117)
C5: (11.913,85.965,79.365)
O3': (8.720,85.079,73.770)
N3: (11.052,83.810,79.326)
OP1: (13.031,89.024,76.489)
OP2: (12.672,90.330,74.309)
C2: (10.593,83.959,78.049)
C1': (10.314,85.220,76.075)
C3': (9.219,86.286,74.331)
O5': (11.050,88.542,75.036)
O4': (11.339,85.674,75.213)
C5': (11.317,87.708,73.913)
P: (12.108,89.628,75.504)
C4': (10.725,86.336,74.074)
C2': (9.162,86.167,75.852)
O2': (7.956,85.630,76.362)
N1: (10.816,85.161,77.453)
O4: (12.070,84.459,81.196)
O2: (9.995,83.083,77.457)
C6: (11.469,86.145,78.117)
C5: (11.913,85.965,79.365)
O3': (8.720,85.079,73.770)
OP1: (8.995,79.533,81.206)
OP2: (10.561,81.506,80.848)
C3': (13.942,79.184,82.361)
C1': (15.797,79.684,80.965)
C5': (12.518,78.848,80.251)
O4': (14.915,78.906,80.212)
C8: (14.594,81.410,79.659)
O2': (16.128,78.289,82.869)
C6: (16.059,84.549,79.999)
C5: (15.610,83.225,79.970)
C4: (16.306,82.261,80.702)
P: (10.246,80.070,80.642)
C4': (13.769,78.500,81.005)
C2': (15.444,79.457,82.434)
C2: (17.717,83.788,81.389)
N1: (17.146,84.803,80.737)
N3: (17.388,82.496,81.450)
N6: (15.472,85.547,79.330)
N7: (14.533,82.665,79.305)
N9: (15.616,81.080,80.521)
O5': (11.465,79.169,81.122)
O3': (13.449,78.375,83.432)
OP2: (10.561,81.506,80.848)
C3': (13.942,79.184,82.361)
C1': (15.797,79.684,80.965)
C5': (12.518,78.848,80.251)
O4': (14.915,78.906,80.212)
C8: (14.594,81.410,79.659)
O2': (16.128,78.289,82.869)
C6: (16.059,84.549,79.999)
C5: (15.610,83.225,79.970)
C4: (16.306,82.261,80.702)
P: (10.246,80.070,80.642)
C4': (13.769,78.500,81.005)
C2': (15.444,79.457,82.434)
C2: (17.717,83.788,81.389)
N1: (17.146,84.803,80.737)
N3: (17.388,82.496,81.450)
N6: (15.472,85.547,79.330)
N7: (14.533,82.665,79.305)
N9: (15.616,81.080,80.521)
O5': (11.465,79.169,81.122)
O3': (13.449,78.375,83.432)
Image (generated by PyMOL):