Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2DXI:C53:C56
Extra
PDB:
ATOM 1 O3' U A 52 -6.415 86.251 46.185 1.00 92.65 O
ATOM 2 P U A 53 -8.001 85.953 46.180 1.00 92.63 P
ATOM 3 OP1 U A 53 -8.659 86.977 45.330 1.00 91.83 O
ATOM 4 OP2 U A 53 -8.444 85.771 47.592 1.00 90.22 O
ATOM 5 O5' U A 53 -8.112 84.556 45.427 1.00 91.43 O
ATOM 6 C5' U A 53 -7.457 84.359 44.179 1.00 89.83 C
ATOM 7 C4' U A 53 -7.072 82.906 44.006 1.00 95.78 C
ATOM 8 O4' U A 53 -6.168 82.496 45.074 1.00 98.51 O
ATOM 9 C3' U A 53 -8.201 81.898 44.116 1.00 93.36 C
ATOM 10 O3' U A 53 -8.932 81.813 42.904 1.00 94.20 O
ATOM 11 C2' U A 53 -7.429 80.613 44.378 1.00 94.05 C
ATOM 12 O2' U A 53 -6.805 80.137 43.201 1.00 86.75 O
ATOM 13 C1' U A 53 -6.352 81.110 45.342 1.00 90.96 C
ATOM 14 N1 U A 53 -6.743 80.935 46.750 1.00 84.72 N
ATOM 15 C2 U A 53 -6.408 79.734 47.350 1.00 85.76 C
ATOM 16 O2 U A 53 -5.787 78.861 46.772 1.00 84.13 O
ATOM 17 N3 U A 53 -6.822 79.592 48.653 1.00 88.84 N
ATOM 18 C4 U A 53 -7.513 80.510 49.410 1.00 89.26 C
ATOM 19 O4 U A 53 -7.822 80.223 50.571 1.00 87.38 O
ATOM 20 C5 U A 53 -7.812 81.742 48.727 1.00 89.64 C
ATOM 21 C6 U A 53 -7.426 81.906 47.449 1.00 84.65 C
ATOM 22 P C A 54 -10.532 81.684 42.955 1.00 96.88 P
ATOM 23 OP1 C A 54 -11.031 81.508 41.564 1.00 90.20 O
ATOM 24 OP2 C A 54 -11.046 82.798 43.794 1.00 97.56 O
ATOM 25 O5' C A 54 -10.788 80.344 43.772 1.00 91.83 O
TER
ATOM 1 O3' G B 55 -6.565 74.949 49.225 1.00 84.71 O
ATOM 2 P A B 56 -5.971 76.117 50.152 1.00 91.19 P
ATOM 3 OP1 A B 56 -7.107 76.876 50.750 1.00 99.01 O
ATOM 4 OP2 A B 56 -4.962 76.837 49.341 1.00 90.44 O
ATOM 5 O5' A B 56 -5.214 75.346 51.321 1.00 88.10 O
ATOM 6 C5' A B 56 -3.854 75.643 51.643 1.00 88.08 C
ATOM 7 C4' A B 56 -2.956 74.529 51.152 1.00 85.43 C
ATOM 8 O4' A B 56 -2.670 74.739 49.736 1.00 83.89 O
ATOM 9 C3' A B 56 -1.593 74.478 51.810 1.00 82.59 C
ATOM 10 O3' A B 56 -1.310 73.553 52.858 1.00 80.68 O
ATOM 11 C2' A B 56 -0.593 75.161 50.888 1.00 85.39 C
ATOM 12 O2' A B 56 0.592 74.410 50.730 1.00 94.53 O
ATOM 13 C1' A B 56 -1.322 75.154 49.545 1.00 82.21 C
ATOM 14 N9 A B 56 -1.315 76.487 48.935 1.00 85.56 N
ATOM 15 C8 A B 56 -1.979 77.611 49.368 1.00 86.55 C
ATOM 16 N7 A B 56 -1.761 78.673 48.628 1.00 81.73 N
ATOM 17 C5 A B 56 -0.900 78.220 47.640 1.00 83.83 C
ATOM 18 C6 A B 56 -0.296 78.862 46.543 1.00 85.09 C
ATOM 19 N6 A B 56 -0.473 80.148 46.245 1.00 84.56 N
ATOM 20 N1 A B 56 0.507 78.125 45.750 1.00 86.98 N
ATOM 21 C2 A B 56 0.686 76.835 46.044 1.00 86.30 C
ATOM 22 N3 A B 56 0.176 76.118 47.042 1.00 90.30 N
ATOM 23 C4 A B 56 -0.618 76.877 47.814 1.00 85.19 C
ATOM 24 P U B 57 -0.819 72.067 52.508 1.00 72.68 P
ATOM 25 OP1 U B 57 -1.335 71.696 51.162 1.00 73.05 O
ATOM 26 OP2 U B 57 -1.175 71.242 53.687 1.00 78.43 O
ATOM 27 O5' U B 57 0.770 72.163 52.413 1.00 79.41 O
TER
ATOM 2 P U A 53 -8.001 85.953 46.180 1.00 92.63 P
ATOM 3 OP1 U A 53 -8.659 86.977 45.330 1.00 91.83 O
ATOM 4 OP2 U A 53 -8.444 85.771 47.592 1.00 90.22 O
ATOM 5 O5' U A 53 -8.112 84.556 45.427 1.00 91.43 O
ATOM 6 C5' U A 53 -7.457 84.359 44.179 1.00 89.83 C
ATOM 7 C4' U A 53 -7.072 82.906 44.006 1.00 95.78 C
ATOM 8 O4' U A 53 -6.168 82.496 45.074 1.00 98.51 O
ATOM 9 C3' U A 53 -8.201 81.898 44.116 1.00 93.36 C
ATOM 10 O3' U A 53 -8.932 81.813 42.904 1.00 94.20 O
ATOM 11 C2' U A 53 -7.429 80.613 44.378 1.00 94.05 C
ATOM 12 O2' U A 53 -6.805 80.137 43.201 1.00 86.75 O
ATOM 13 C1' U A 53 -6.352 81.110 45.342 1.00 90.96 C
ATOM 14 N1 U A 53 -6.743 80.935 46.750 1.00 84.72 N
ATOM 15 C2 U A 53 -6.408 79.734 47.350 1.00 85.76 C
ATOM 16 O2 U A 53 -5.787 78.861 46.772 1.00 84.13 O
ATOM 17 N3 U A 53 -6.822 79.592 48.653 1.00 88.84 N
ATOM 18 C4 U A 53 -7.513 80.510 49.410 1.00 89.26 C
ATOM 19 O4 U A 53 -7.822 80.223 50.571 1.00 87.38 O
ATOM 20 C5 U A 53 -7.812 81.742 48.727 1.00 89.64 C
ATOM 21 C6 U A 53 -7.426 81.906 47.449 1.00 84.65 C
ATOM 22 P C A 54 -10.532 81.684 42.955 1.00 96.88 P
ATOM 23 OP1 C A 54 -11.031 81.508 41.564 1.00 90.20 O
ATOM 24 OP2 C A 54 -11.046 82.798 43.794 1.00 97.56 O
ATOM 25 O5' C A 54 -10.788 80.344 43.772 1.00 91.83 O
TER
ATOM 1 O3' G B 55 -6.565 74.949 49.225 1.00 84.71 O
ATOM 2 P A B 56 -5.971 76.117 50.152 1.00 91.19 P
ATOM 3 OP1 A B 56 -7.107 76.876 50.750 1.00 99.01 O
ATOM 4 OP2 A B 56 -4.962 76.837 49.341 1.00 90.44 O
ATOM 5 O5' A B 56 -5.214 75.346 51.321 1.00 88.10 O
ATOM 6 C5' A B 56 -3.854 75.643 51.643 1.00 88.08 C
ATOM 7 C4' A B 56 -2.956 74.529 51.152 1.00 85.43 C
ATOM 8 O4' A B 56 -2.670 74.739 49.736 1.00 83.89 O
ATOM 9 C3' A B 56 -1.593 74.478 51.810 1.00 82.59 C
ATOM 10 O3' A B 56 -1.310 73.553 52.858 1.00 80.68 O
ATOM 11 C2' A B 56 -0.593 75.161 50.888 1.00 85.39 C
ATOM 12 O2' A B 56 0.592 74.410 50.730 1.00 94.53 O
ATOM 13 C1' A B 56 -1.322 75.154 49.545 1.00 82.21 C
ATOM 14 N9 A B 56 -1.315 76.487 48.935 1.00 85.56 N
ATOM 15 C8 A B 56 -1.979 77.611 49.368 1.00 86.55 C
ATOM 16 N7 A B 56 -1.761 78.673 48.628 1.00 81.73 N
ATOM 17 C5 A B 56 -0.900 78.220 47.640 1.00 83.83 C
ATOM 18 C6 A B 56 -0.296 78.862 46.543 1.00 85.09 C
ATOM 19 N6 A B 56 -0.473 80.148 46.245 1.00 84.56 N
ATOM 20 N1 A B 56 0.507 78.125 45.750 1.00 86.98 N
ATOM 21 C2 A B 56 0.686 76.835 46.044 1.00 86.30 C
ATOM 22 N3 A B 56 0.176 76.118 47.042 1.00 90.30 N
ATOM 23 C4 A B 56 -0.618 76.877 47.814 1.00 85.19 C
ATOM 24 P U B 57 -0.819 72.067 52.508 1.00 72.68 P
ATOM 25 OP1 U B 57 -1.335 71.696 51.162 1.00 73.05 O
ATOM 26 OP2 U B 57 -1.175 71.242 53.687 1.00 78.43 O
ATOM 27 O5' U B 57 0.770 72.163 52.413 1.00 79.41 O
TER
Atoms:
C4: (-7.513,80.510,49.410)
N3: (-6.822,79.592,48.653)
OP1: (-8.659,86.977,45.330)
OP2: (-8.444,85.771,47.592)
C2: (-6.408,79.734,47.350)
C1': (-6.352,81.110,45.342)
C3': (-8.201,81.898,44.116)
O5': (-8.112,84.556,45.427)
O4': (-6.168,82.496,45.074)
C5': (-7.457,84.359,44.179)
P: (-8.001,85.953,46.180)
C4': (-7.072,82.906,44.006)
C2': (-7.429,80.613,44.378)
O2': (-6.805,80.137,43.201)
N1: (-6.743,80.935,46.750)
O4: (-7.822,80.223,50.571)
O2: (-5.787,78.861,46.772)
C6: (-7.426,81.906,47.449)
C5: (-7.812,81.742,48.727)
O3': (-8.932,81.813,42.904)
N3: (-6.822,79.592,48.653)
OP1: (-8.659,86.977,45.330)
OP2: (-8.444,85.771,47.592)
C2: (-6.408,79.734,47.350)
C1': (-6.352,81.110,45.342)
C3': (-8.201,81.898,44.116)
O5': (-8.112,84.556,45.427)
O4': (-6.168,82.496,45.074)
C5': (-7.457,84.359,44.179)
P: (-8.001,85.953,46.180)
C4': (-7.072,82.906,44.006)
C2': (-7.429,80.613,44.378)
O2': (-6.805,80.137,43.201)
N1: (-6.743,80.935,46.750)
O4: (-7.822,80.223,50.571)
O2: (-5.787,78.861,46.772)
C6: (-7.426,81.906,47.449)
C5: (-7.812,81.742,48.727)
O3': (-8.932,81.813,42.904)
OP1: (-7.107,76.876,50.750)
OP2: (-4.962,76.837,49.341)
C3': (-1.593,74.478,51.810)
C1': (-1.322,75.154,49.545)
C5': (-3.854,75.643,51.643)
O4': (-2.670,74.739,49.736)
C8: (-1.979,77.611,49.368)
O2': (0.592,74.410,50.730)
C6: (-0.296,78.862,46.543)
C5: (-0.900,78.220,47.640)
C4: (-0.618,76.877,47.814)
P: (-5.971,76.117,50.152)
C4': (-2.956,74.529,51.152)
C2': (-0.593,75.161,50.888)
C2: (0.686,76.835,46.044)
N1: (0.507,78.125,45.750)
N3: (0.176,76.118,47.042)
N6: (-0.473,80.148,46.245)
N7: (-1.761,78.673,48.628)
N9: (-1.315,76.487,48.935)
O5': (-5.214,75.346,51.321)
O3': (-1.310,73.553,52.858)
OP2: (-4.962,76.837,49.341)
C3': (-1.593,74.478,51.810)
C1': (-1.322,75.154,49.545)
C5': (-3.854,75.643,51.643)
O4': (-2.670,74.739,49.736)
C8: (-1.979,77.611,49.368)
O2': (0.592,74.410,50.730)
C6: (-0.296,78.862,46.543)
C5: (-0.900,78.220,47.640)
C4: (-0.618,76.877,47.814)
P: (-5.971,76.117,50.152)
C4': (-2.956,74.529,51.152)
C2': (-0.593,75.161,50.888)
C2: (0.686,76.835,46.044)
N1: (0.507,78.125,45.750)
N3: (0.176,76.118,47.042)
N6: (-0.473,80.148,46.245)
N7: (-1.761,78.673,48.628)
N9: (-1.315,76.487,48.935)
O5': (-5.214,75.346,51.321)
O3': (-1.310,73.553,52.858)
Image (generated by PyMOL):