Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11185:11188
Extra
PDB:
ATOM 1 O3' A A1184 -27.461 -9.021 -13.622 1.00308.21 O
ATOM 2 P U A1185 -28.866 -8.227 -13.733 1.00252.77 P
ATOM 3 OP1 U A1185 -29.406 -8.108 -12.356 1.00253.22 O
ATOM 4 OP2 U A1185 -29.679 -8.929 -14.757 1.00253.47 O
ATOM 5 O5' U A1185 -28.445 -6.778 -14.272 1.00252.28 O
ATOM 6 C5' U A1185 -28.375 -6.494 -15.673 1.00252.17 C
ATOM 7 C4' U A1185 -29.582 -5.734 -16.176 1.00253.05 C
ATOM 8 O4' U A1185 -29.213 -5.040 -17.394 1.00252.67 O
ATOM 9 C3' U A1185 -30.789 -6.598 -16.535 1.00254.10 C
ATOM 10 O3' U A1185 -32.014 -5.860 -16.387 1.00255.01 O
ATOM 11 C2' U A1185 -30.554 -6.879 -18.015 1.00253.91 C
ATOM 12 O2' U A1185 -31.719 -7.208 -18.740 1.00254.86 O
ATOM 13 C1' U A1185 -29.943 -5.557 -18.492 1.00253.29 C
ATOM 14 N1 U A1185 -29.006 -5.710 -19.641 1.00252.54 N
ATOM 15 C2 U A1185 -27.925 -4.845 -19.807 1.00251.59 C
ATOM 16 O2 U A1185 -27.635 -3.931 -19.047 1.00251.28 O
ATOM 17 N3 U A1185 -27.145 -5.100 -20.915 1.00250.98 N
ATOM 18 C4 U A1185 -27.319 -6.084 -21.868 1.00251.20 C
ATOM 19 O4 U A1185 -26.531 -6.175 -22.811 1.00250.57 O
ATOM 20 C5 U A1185 -28.450 -6.923 -21.637 1.00252.18 C
ATOM 21 C6 U A1185 -29.227 -6.708 -20.567 1.00252.80 C
ATOM 22 P G A1186 -32.199 -4.711 -15.264 1.00234.31 P
ATOM 23 OP1 G A1186 -31.389 -5.092 -14.074 1.00233.72 O
ATOM 24 OP2 G A1186 -33.658 -4.518 -15.087 1.00235.46 O
ATOM 25 O5' G A1186 -31.578 -3.424 -15.970 1.00233.68 O
TER
ATOM 1 O3' G B1187 -25.205 -0.268 -21.984 1.00296.84 O
ATOM 2 P A B1188 -24.505 -1.639 -22.492 1.00323.87 P
ATOM 3 OP1 A B1188 -24.369 -1.540 -23.968 1.00323.74 O
ATOM 4 OP2 A B1188 -25.286 -2.768 -21.927 1.00324.61 O
ATOM 5 O5' A B1188 -23.060 -1.586 -21.812 1.00322.73 O
ATOM 6 C5' A B1188 -22.436 -2.775 -21.324 1.00322.36 C
ATOM 7 C4' A B1188 -20.928 -2.670 -21.323 1.00321.15 C
ATOM 8 O4' A B1188 -20.527 -1.470 -20.607 1.00320.73 O
ATOM 9 C3' A B1188 -20.189 -3.831 -20.653 1.00320.69 C
ATOM 10 O3' A B1188 -18.945 -4.054 -21.324 1.00319.71 O
ATOM 11 C2' A B1188 -19.921 -3.283 -19.257 1.00320.44 C
ATOM 12 O2' A B1188 -18.845 -3.895 -18.579 1.00319.65 O
ATOM 13 C1' A B1188 -19.637 -1.818 -19.566 1.00320.07 C
ATOM 14 N9 A B1188 -19.870 -0.913 -18.442 1.00320.19 N
ATOM 15 C8 A B1188 -20.804 -1.020 -17.442 1.00320.95 C
ATOM 16 N7 A B1188 -20.752 -0.037 -16.577 1.00320.83 N
ATOM 17 C5 A B1188 -19.717 0.764 -17.041 1.00319.93 C
ATOM 18 C6 A B1188 -19.163 1.962 -16.564 1.00319.39 C
ATOM 19 N6 A B1188 -19.600 2.582 -15.468 1.00319.70 N
ATOM 20 N1 A B1188 -18.138 2.503 -17.260 1.00318.52 N
ATOM 21 C2 A B1188 -17.703 1.874 -18.360 1.00318.22 C
ATOM 22 N3 A B1188 -18.143 0.743 -18.908 1.00318.66 N
ATOM 23 C4 A B1188 -19.162 0.235 -18.189 1.00319.52 C
ATOM 24 P A B1189 -18.743 -5.352 -22.253 1.00246.69 P
ATOM 25 OP1 A B1189 -20.086 -5.927 -22.494 1.00247.81 O
ATOM 26 OP2 A B1189 -17.715 -6.203 -21.604 1.00245.97 O
ATOM 27 O5' A B1189 -18.166 -4.735 -23.611 1.00246.16 O
TER
ATOM 2 P U A1185 -28.866 -8.227 -13.733 1.00252.77 P
ATOM 3 OP1 U A1185 -29.406 -8.108 -12.356 1.00253.22 O
ATOM 4 OP2 U A1185 -29.679 -8.929 -14.757 1.00253.47 O
ATOM 5 O5' U A1185 -28.445 -6.778 -14.272 1.00252.28 O
ATOM 6 C5' U A1185 -28.375 -6.494 -15.673 1.00252.17 C
ATOM 7 C4' U A1185 -29.582 -5.734 -16.176 1.00253.05 C
ATOM 8 O4' U A1185 -29.213 -5.040 -17.394 1.00252.67 O
ATOM 9 C3' U A1185 -30.789 -6.598 -16.535 1.00254.10 C
ATOM 10 O3' U A1185 -32.014 -5.860 -16.387 1.00255.01 O
ATOM 11 C2' U A1185 -30.554 -6.879 -18.015 1.00253.91 C
ATOM 12 O2' U A1185 -31.719 -7.208 -18.740 1.00254.86 O
ATOM 13 C1' U A1185 -29.943 -5.557 -18.492 1.00253.29 C
ATOM 14 N1 U A1185 -29.006 -5.710 -19.641 1.00252.54 N
ATOM 15 C2 U A1185 -27.925 -4.845 -19.807 1.00251.59 C
ATOM 16 O2 U A1185 -27.635 -3.931 -19.047 1.00251.28 O
ATOM 17 N3 U A1185 -27.145 -5.100 -20.915 1.00250.98 N
ATOM 18 C4 U A1185 -27.319 -6.084 -21.868 1.00251.20 C
ATOM 19 O4 U A1185 -26.531 -6.175 -22.811 1.00250.57 O
ATOM 20 C5 U A1185 -28.450 -6.923 -21.637 1.00252.18 C
ATOM 21 C6 U A1185 -29.227 -6.708 -20.567 1.00252.80 C
ATOM 22 P G A1186 -32.199 -4.711 -15.264 1.00234.31 P
ATOM 23 OP1 G A1186 -31.389 -5.092 -14.074 1.00233.72 O
ATOM 24 OP2 G A1186 -33.658 -4.518 -15.087 1.00235.46 O
ATOM 25 O5' G A1186 -31.578 -3.424 -15.970 1.00233.68 O
TER
ATOM 1 O3' G B1187 -25.205 -0.268 -21.984 1.00296.84 O
ATOM 2 P A B1188 -24.505 -1.639 -22.492 1.00323.87 P
ATOM 3 OP1 A B1188 -24.369 -1.540 -23.968 1.00323.74 O
ATOM 4 OP2 A B1188 -25.286 -2.768 -21.927 1.00324.61 O
ATOM 5 O5' A B1188 -23.060 -1.586 -21.812 1.00322.73 O
ATOM 6 C5' A B1188 -22.436 -2.775 -21.324 1.00322.36 C
ATOM 7 C4' A B1188 -20.928 -2.670 -21.323 1.00321.15 C
ATOM 8 O4' A B1188 -20.527 -1.470 -20.607 1.00320.73 O
ATOM 9 C3' A B1188 -20.189 -3.831 -20.653 1.00320.69 C
ATOM 10 O3' A B1188 -18.945 -4.054 -21.324 1.00319.71 O
ATOM 11 C2' A B1188 -19.921 -3.283 -19.257 1.00320.44 C
ATOM 12 O2' A B1188 -18.845 -3.895 -18.579 1.00319.65 O
ATOM 13 C1' A B1188 -19.637 -1.818 -19.566 1.00320.07 C
ATOM 14 N9 A B1188 -19.870 -0.913 -18.442 1.00320.19 N
ATOM 15 C8 A B1188 -20.804 -1.020 -17.442 1.00320.95 C
ATOM 16 N7 A B1188 -20.752 -0.037 -16.577 1.00320.83 N
ATOM 17 C5 A B1188 -19.717 0.764 -17.041 1.00319.93 C
ATOM 18 C6 A B1188 -19.163 1.962 -16.564 1.00319.39 C
ATOM 19 N6 A B1188 -19.600 2.582 -15.468 1.00319.70 N
ATOM 20 N1 A B1188 -18.138 2.503 -17.260 1.00318.52 N
ATOM 21 C2 A B1188 -17.703 1.874 -18.360 1.00318.22 C
ATOM 22 N3 A B1188 -18.143 0.743 -18.908 1.00318.66 N
ATOM 23 C4 A B1188 -19.162 0.235 -18.189 1.00319.52 C
ATOM 24 P A B1189 -18.743 -5.352 -22.253 1.00246.69 P
ATOM 25 OP1 A B1189 -20.086 -5.927 -22.494 1.00247.81 O
ATOM 26 OP2 A B1189 -17.715 -6.203 -21.604 1.00245.97 O
ATOM 27 O5' A B1189 -18.166 -4.735 -23.611 1.00246.16 O
TER
Atoms:
C4: (-27.319,-6.084,-21.868)
N3: (-27.145,-5.100,-20.915)
OP1: (-29.406,-8.108,-12.356)
OP2: (-29.679,-8.929,-14.757)
C2: (-27.925,-4.845,-19.807)
C1': (-29.943,-5.557,-18.492)
C3': (-30.789,-6.598,-16.535)
O5': (-28.445,-6.778,-14.272)
O4': (-29.213,-5.040,-17.394)
C5': (-28.375,-6.494,-15.673)
P: (-28.866,-8.227,-13.733)
C4': (-29.582,-5.734,-16.176)
C2': (-30.554,-6.879,-18.015)
O2': (-31.719,-7.208,-18.740)
N1: (-29.006,-5.710,-19.641)
O4: (-26.531,-6.175,-22.811)
O2: (-27.635,-3.931,-19.047)
C6: (-29.227,-6.708,-20.567)
C5: (-28.450,-6.923,-21.637)
O3': (-32.014,-5.860,-16.387)
N3: (-27.145,-5.100,-20.915)
OP1: (-29.406,-8.108,-12.356)
OP2: (-29.679,-8.929,-14.757)
C2: (-27.925,-4.845,-19.807)
C1': (-29.943,-5.557,-18.492)
C3': (-30.789,-6.598,-16.535)
O5': (-28.445,-6.778,-14.272)
O4': (-29.213,-5.040,-17.394)
C5': (-28.375,-6.494,-15.673)
P: (-28.866,-8.227,-13.733)
C4': (-29.582,-5.734,-16.176)
C2': (-30.554,-6.879,-18.015)
O2': (-31.719,-7.208,-18.740)
N1: (-29.006,-5.710,-19.641)
O4: (-26.531,-6.175,-22.811)
O2: (-27.635,-3.931,-19.047)
C6: (-29.227,-6.708,-20.567)
C5: (-28.450,-6.923,-21.637)
O3': (-32.014,-5.860,-16.387)
OP1: (-24.369,-1.540,-23.968)
OP2: (-25.286,-2.768,-21.927)
C3': (-20.189,-3.831,-20.653)
C1': (-19.637,-1.818,-19.566)
C5': (-22.436,-2.775,-21.324)
O4': (-20.527,-1.470,-20.607)
C8: (-20.804,-1.020,-17.442)
O2': (-18.845,-3.895,-18.579)
C6: (-19.163,1.962,-16.564)
C5: (-19.717,0.764,-17.041)
C4: (-19.162,0.235,-18.189)
P: (-24.505,-1.639,-22.492)
C4': (-20.928,-2.670,-21.323)
C2': (-19.921,-3.283,-19.257)
C2: (-17.703,1.874,-18.360)
N1: (-18.138,2.503,-17.260)
N3: (-18.143,0.743,-18.908)
N6: (-19.600,2.582,-15.468)
N7: (-20.752,-0.037,-16.577)
N9: (-19.870,-0.913,-18.442)
O5': (-23.060,-1.586,-21.812)
O3': (-18.945,-4.054,-21.324)
OP2: (-25.286,-2.768,-21.927)
C3': (-20.189,-3.831,-20.653)
C1': (-19.637,-1.818,-19.566)
C5': (-22.436,-2.775,-21.324)
O4': (-20.527,-1.470,-20.607)
C8: (-20.804,-1.020,-17.442)
O2': (-18.845,-3.895,-18.579)
C6: (-19.163,1.962,-16.564)
C5: (-19.717,0.764,-17.041)
C4: (-19.162,0.235,-18.189)
P: (-24.505,-1.639,-22.492)
C4': (-20.928,-2.670,-21.323)
C2': (-19.921,-3.283,-19.257)
C2: (-17.703,1.874,-18.360)
N1: (-18.138,2.503,-17.260)
N3: (-18.143,0.743,-18.908)
N6: (-19.600,2.582,-15.468)
N7: (-20.752,-0.037,-16.577)
N9: (-19.870,-0.913,-18.442)
O5': (-23.060,-1.586,-21.812)
O3': (-18.945,-4.054,-21.324)
Image (generated by PyMOL):