Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A965:A2400
Extra
PDB:
ATOM 1 O3' U A 964 119.284 -60.115 -2.259 1.00 63.43 O
ATOM 2 P A A 965 118.082 -60.409 -1.229 1.00 59.79 P
ATOM 3 OP1 A A 965 118.460 -60.133 0.181 1.00 49.16 O
ATOM 4 OP2 A A 965 117.626 -61.772 -1.599 1.00 55.87 O
ATOM 5 O5' A A 965 116.919 -59.388 -1.607 1.00 56.21 O
ATOM 6 C5' A A 965 115.866 -59.814 -2.466 1.00 57.63 C
ATOM 7 C4' A A 965 114.795 -60.559 -1.682 1.00 59.04 C
ATOM 8 O4' A A 965 113.929 -59.569 -1.062 1.00 56.71 O
ATOM 9 C3' A A 965 113.903 -61.420 -2.584 1.00 53.13 C
ATOM 10 O3' A A 965 114.247 -62.798 -2.380 1.00 42.36 O
ATOM 11 C2' A A 965 112.498 -61.140 -2.070 1.00 54.35 C
ATOM 12 O2' A A 965 112.209 -61.941 -0.950 1.00 58.50 O
ATOM 13 C1' A A 965 112.625 -59.706 -1.562 1.00 51.87 C
ATOM 14 N9 A A 965 112.434 -58.661 -2.557 1.00 48.17 N
ATOM 15 C8 A A 965 113.386 -57.918 -3.224 1.00 51.10 C
ATOM 16 N7 A A 965 112.885 -56.959 -3.957 1.00 51.50 N
ATOM 17 C5 A A 965 111.520 -57.096 -3.786 1.00 48.05 C
ATOM 18 C6 A A 965 110.450 -56.372 -4.262 1.00 42.22 C
ATOM 19 N6 A A 965 110.589 -55.307 -5.053 1.00 42.93 N
ATOM 20 N1 A A 965 109.211 -56.769 -3.906 1.00 42.19 N
ATOM 21 C2 A A 965 109.084 -57.837 -3.113 1.00 45.17 C
ATOM 22 N3 A A 965 110.020 -58.601 -2.591 1.00 48.86 N
ATOM 23 C4 A A 965 111.231 -58.167 -2.961 1.00 48.11 C
ATOM 24 P A A 966 114.082 -63.860 -3.579 1.00 41.50 P
ATOM 25 OP1 A A 966 114.578 -65.178 -3.093 1.00 47.50 O
ATOM 26 OP2 A A 966 114.666 -63.262 -4.802 1.00 44.88 O
ATOM 27 O5' A A 966 112.512 -63.971 -3.832 1.00 50.15 O
TER
ATOM 1 O3' G B2399 101.718 -50.271 -4.238 1.00 42.33 O
ATOM 2 P G B2400 102.403 -50.905 -5.555 1.00 40.61 P
ATOM 3 OP1 G B2400 103.081 -49.733 -6.164 1.00 39.68 O
ATOM 4 OP2 G B2400 101.431 -51.672 -6.366 1.00 26.63 O
ATOM 5 O5' G B2400 103.518 -51.941 -5.044 1.00 45.53 O
ATOM 6 C5' G B2400 104.904 -51.719 -5.358 1.00 50.73 C
ATOM 7 C4' G B2400 105.709 -53.006 -5.313 1.00 47.58 C
ATOM 8 O4' G B2400 105.653 -53.568 -3.984 1.00 47.48 O
ATOM 9 C3' G B2400 105.306 -54.146 -6.231 1.00 37.74 C
ATOM 10 O3' G B2400 105.935 -54.027 -7.488 1.00 35.26 O
ATOM 11 C2' G B2400 105.891 -55.352 -5.531 1.00 40.00 C
ATOM 12 O2' G B2400 107.257 -55.466 -5.839 1.00 35.81 O
ATOM 13 C1' G B2400 105.734 -54.968 -4.067 1.00 40.18 C
ATOM 14 N9 G B2400 104.525 -55.528 -3.484 1.00 43.21 N
ATOM 15 C8 G B2400 103.413 -54.855 -3.022 1.00 46.03 C
ATOM 16 N7 G B2400 102.526 -55.647 -2.480 1.00 47.60 N
ATOM 17 C5 G B2400 103.075 -56.915 -2.607 1.00 43.85 C
ATOM 18 C6 G B2400 102.590 -58.170 -2.170 1.00 40.92 C
ATOM 19 O6 G B2400 101.545 -58.415 -1.545 1.00 38.42 O
ATOM 20 N1 G B2400 103.472 -59.202 -2.504 1.00 45.42 N
ATOM 21 C2 G B2400 104.680 -59.036 -3.169 1.00 45.77 C
ATOM 22 N2 G B2400 105.413 -60.139 -3.392 1.00 44.10 N
ATOM 23 N3 G B2400 105.140 -57.868 -3.576 1.00 42.78 N
ATOM 24 C4 G B2400 104.297 -56.858 -3.254 1.00 42.94 C
ATOM 25 P C B2401 105.071 -54.221 -8.817 1.00 33.50 P
ATOM 26 OP1 C B2401 105.724 -53.493 -9.949 1.00 36.55 O
ATOM 27 OP2 C B2401 103.659 -53.890 -8.441 1.00 43.12 O
ATOM 28 O5' C B2401 105.080 -55.787 -9.068 1.00 31.25 O
TER
ATOM 2 P A A 965 118.082 -60.409 -1.229 1.00 59.79 P
ATOM 3 OP1 A A 965 118.460 -60.133 0.181 1.00 49.16 O
ATOM 4 OP2 A A 965 117.626 -61.772 -1.599 1.00 55.87 O
ATOM 5 O5' A A 965 116.919 -59.388 -1.607 1.00 56.21 O
ATOM 6 C5' A A 965 115.866 -59.814 -2.466 1.00 57.63 C
ATOM 7 C4' A A 965 114.795 -60.559 -1.682 1.00 59.04 C
ATOM 8 O4' A A 965 113.929 -59.569 -1.062 1.00 56.71 O
ATOM 9 C3' A A 965 113.903 -61.420 -2.584 1.00 53.13 C
ATOM 10 O3' A A 965 114.247 -62.798 -2.380 1.00 42.36 O
ATOM 11 C2' A A 965 112.498 -61.140 -2.070 1.00 54.35 C
ATOM 12 O2' A A 965 112.209 -61.941 -0.950 1.00 58.50 O
ATOM 13 C1' A A 965 112.625 -59.706 -1.562 1.00 51.87 C
ATOM 14 N9 A A 965 112.434 -58.661 -2.557 1.00 48.17 N
ATOM 15 C8 A A 965 113.386 -57.918 -3.224 1.00 51.10 C
ATOM 16 N7 A A 965 112.885 -56.959 -3.957 1.00 51.50 N
ATOM 17 C5 A A 965 111.520 -57.096 -3.786 1.00 48.05 C
ATOM 18 C6 A A 965 110.450 -56.372 -4.262 1.00 42.22 C
ATOM 19 N6 A A 965 110.589 -55.307 -5.053 1.00 42.93 N
ATOM 20 N1 A A 965 109.211 -56.769 -3.906 1.00 42.19 N
ATOM 21 C2 A A 965 109.084 -57.837 -3.113 1.00 45.17 C
ATOM 22 N3 A A 965 110.020 -58.601 -2.591 1.00 48.86 N
ATOM 23 C4 A A 965 111.231 -58.167 -2.961 1.00 48.11 C
ATOM 24 P A A 966 114.082 -63.860 -3.579 1.00 41.50 P
ATOM 25 OP1 A A 966 114.578 -65.178 -3.093 1.00 47.50 O
ATOM 26 OP2 A A 966 114.666 -63.262 -4.802 1.00 44.88 O
ATOM 27 O5' A A 966 112.512 -63.971 -3.832 1.00 50.15 O
TER
ATOM 1 O3' G B2399 101.718 -50.271 -4.238 1.00 42.33 O
ATOM 2 P G B2400 102.403 -50.905 -5.555 1.00 40.61 P
ATOM 3 OP1 G B2400 103.081 -49.733 -6.164 1.00 39.68 O
ATOM 4 OP2 G B2400 101.431 -51.672 -6.366 1.00 26.63 O
ATOM 5 O5' G B2400 103.518 -51.941 -5.044 1.00 45.53 O
ATOM 6 C5' G B2400 104.904 -51.719 -5.358 1.00 50.73 C
ATOM 7 C4' G B2400 105.709 -53.006 -5.313 1.00 47.58 C
ATOM 8 O4' G B2400 105.653 -53.568 -3.984 1.00 47.48 O
ATOM 9 C3' G B2400 105.306 -54.146 -6.231 1.00 37.74 C
ATOM 10 O3' G B2400 105.935 -54.027 -7.488 1.00 35.26 O
ATOM 11 C2' G B2400 105.891 -55.352 -5.531 1.00 40.00 C
ATOM 12 O2' G B2400 107.257 -55.466 -5.839 1.00 35.81 O
ATOM 13 C1' G B2400 105.734 -54.968 -4.067 1.00 40.18 C
ATOM 14 N9 G B2400 104.525 -55.528 -3.484 1.00 43.21 N
ATOM 15 C8 G B2400 103.413 -54.855 -3.022 1.00 46.03 C
ATOM 16 N7 G B2400 102.526 -55.647 -2.480 1.00 47.60 N
ATOM 17 C5 G B2400 103.075 -56.915 -2.607 1.00 43.85 C
ATOM 18 C6 G B2400 102.590 -58.170 -2.170 1.00 40.92 C
ATOM 19 O6 G B2400 101.545 -58.415 -1.545 1.00 38.42 O
ATOM 20 N1 G B2400 103.472 -59.202 -2.504 1.00 45.42 N
ATOM 21 C2 G B2400 104.680 -59.036 -3.169 1.00 45.77 C
ATOM 22 N2 G B2400 105.413 -60.139 -3.392 1.00 44.10 N
ATOM 23 N3 G B2400 105.140 -57.868 -3.576 1.00 42.78 N
ATOM 24 C4 G B2400 104.297 -56.858 -3.254 1.00 42.94 C
ATOM 25 P C B2401 105.071 -54.221 -8.817 1.00 33.50 P
ATOM 26 OP1 C B2401 105.724 -53.493 -9.949 1.00 36.55 O
ATOM 27 OP2 C B2401 103.659 -53.890 -8.441 1.00 43.12 O
ATOM 28 O5' C B2401 105.080 -55.787 -9.068 1.00 31.25 O
TER
Atoms:
OP1: (118.460,-60.133,0.181)
OP2: (117.626,-61.772,-1.599)
C3': (113.903,-61.420,-2.584)
C1': (112.625,-59.706,-1.562)
C5': (115.866,-59.814,-2.466)
O4': (113.929,-59.569,-1.062)
C8: (113.386,-57.918,-3.224)
O2': (112.209,-61.941,-0.950)
C6: (110.450,-56.372,-4.262)
C5: (111.520,-57.096,-3.786)
C4: (111.231,-58.167,-2.961)
P: (118.082,-60.409,-1.229)
C4': (114.795,-60.559,-1.682)
C2': (112.498,-61.140,-2.070)
C2: (109.084,-57.837,-3.113)
N1: (109.211,-56.769,-3.906)
N3: (110.020,-58.601,-2.591)
N6: (110.589,-55.307,-5.053)
N7: (112.885,-56.959,-3.957)
N9: (112.434,-58.661,-2.557)
O5': (116.919,-59.388,-1.607)
O3': (114.247,-62.798,-2.380)
OP2: (117.626,-61.772,-1.599)
C3': (113.903,-61.420,-2.584)
C1': (112.625,-59.706,-1.562)
C5': (115.866,-59.814,-2.466)
O4': (113.929,-59.569,-1.062)
C8: (113.386,-57.918,-3.224)
O2': (112.209,-61.941,-0.950)
C6: (110.450,-56.372,-4.262)
C5: (111.520,-57.096,-3.786)
C4: (111.231,-58.167,-2.961)
P: (118.082,-60.409,-1.229)
C4': (114.795,-60.559,-1.682)
C2': (112.498,-61.140,-2.070)
C2: (109.084,-57.837,-3.113)
N1: (109.211,-56.769,-3.906)
N3: (110.020,-58.601,-2.591)
N6: (110.589,-55.307,-5.053)
N7: (112.885,-56.959,-3.957)
N9: (112.434,-58.661,-2.557)
O5': (116.919,-59.388,-1.607)
O3': (114.247,-62.798,-2.380)
OP1: (103.081,-49.733,-6.164)
OP2: (101.431,-51.672,-6.366)
C3': (105.306,-54.146,-6.231)
C1': (105.734,-54.968,-4.067)
C5': (104.904,-51.719,-5.358)
O6: (101.545,-58.415,-1.545)
O4': (105.653,-53.568,-3.984)
C8: (103.413,-54.855,-3.022)
C2: (104.680,-59.036,-3.169)
C6: (102.590,-58.170,-2.170)
C5: (103.075,-56.915,-2.607)
C4: (104.297,-56.858,-3.254)
P: (102.403,-50.905,-5.555)
C4': (105.709,-53.006,-5.313)
C2': (105.891,-55.352,-5.531)
O2': (107.257,-55.466,-5.839)
N1: (103.472,-59.202,-2.504)
N2: (105.413,-60.139,-3.392)
N3: (105.140,-57.868,-3.576)
N7: (102.526,-55.647,-2.480)
N9: (104.525,-55.528,-3.484)
O5': (103.518,-51.941,-5.044)
O3': (105.935,-54.027,-7.488)
OP2: (101.431,-51.672,-6.366)
C3': (105.306,-54.146,-6.231)
C1': (105.734,-54.968,-4.067)
C5': (104.904,-51.719,-5.358)
O6: (101.545,-58.415,-1.545)
O4': (105.653,-53.568,-3.984)
C8: (103.413,-54.855,-3.022)
C2: (104.680,-59.036,-3.169)
C6: (102.590,-58.170,-2.170)
C5: (103.075,-56.915,-2.607)
C4: (104.297,-56.858,-3.254)
P: (102.403,-50.905,-5.555)
C4': (105.709,-53.006,-5.313)
C2': (105.891,-55.352,-5.531)
O2': (107.257,-55.466,-5.839)
N1: (103.472,-59.202,-2.504)
N2: (105.413,-60.139,-3.392)
N3: (105.140,-57.868,-3.576)
N7: (102.526,-55.647,-2.480)
N9: (104.525,-55.528,-3.484)
O5': (103.518,-51.941,-5.044)
O3': (105.935,-54.027,-7.488)
Image (generated by PyMOL):