ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A988:A1233

Extra

PDB:
ATOM 1 O3' U A 987 19.513 72.615 71.845 1.00 66.24 O
ATOM 2 P U A 988 18.002 73.073 71.681 1.00 67.02 P
ATOM 3 OP1 U A 988 17.542 73.510 73.025 1.00 65.81 O
ATOM 4 OP2 U A 988 17.317 71.966 70.986 1.00 68.49 O
ATOM 5 O5' U A 988 18.072 74.330 70.714 1.00 67.56 O
ATOM 6 C5' U A 988 18.371 75.617 71.237 1.00 68.27 C
ATOM 7 C4' U A 988 17.861 76.691 70.317 1.00 68.72 C
ATOM 8 O4' U A 988 16.557 76.333 69.766 1.00 70.39 O
ATOM 9 C3' U A 988 17.665 78.005 71.053 1.00 68.74 C
ATOM 10 O3' U A 988 17.882 79.116 70.194 1.00 65.45 O
ATOM 11 C2' U A 988 16.189 77.933 71.422 1.00 70.97 C
ATOM 12 O2' U A 988 15.650 79.201 71.724 1.00 71.22 O
ATOM 13 C1' U A 988 15.598 77.303 70.155 1.00 72.38 C
ATOM 14 N1 U A 988 14.284 76.650 70.327 1.00 74.61 N
ATOM 15 C2 U A 988 13.132 77.427 70.150 1.00 75.48 C
ATOM 16 O2 U A 988 13.156 78.599 69.824 1.00 74.71 O
ATOM 17 N3 U A 988 11.947 76.770 70.370 1.00 77.21 N
ATOM 18 C4 U A 988 11.783 75.446 70.738 1.00 78.49 C
ATOM 19 O4 U A 988 10.645 75.020 70.983 1.00 79.08 O
ATOM 20 C5 U A 988 13.009 74.705 70.871 1.00 76.94 C
ATOM 21 C6 U A 988 14.183 75.314 70.666 1.00 75.33 C
ATOM 22 P U A 989 19.309 79.856 70.175 1.00 63.44 P
ATOM 23 OP1 U A 989 19.049 81.283 69.875 1.00 64.40 O
ATOM 24 OP2 U A 989 20.212 79.070 69.292 1.00 63.61 O
ATOM 25 O5' U A 989 19.845 79.770 71.669 1.00 62.09 O
TER

ATOM 1 O3' C B1232 10.342 79.661 71.558 1.00 56.95 O
ATOM 2 P A B1233 9.916 79.784 70.013 1.00 57.33 P
ATOM 3 OP1 A B1233 9.926 78.414 69.421 1.00 57.00 O
ATOM 4 OP2 A B1233 10.748 80.841 69.397 1.00 56.99 O
ATOM 5 O5' A B1233 8.419 80.341 70.080 1.00 56.38 O
ATOM 6 C5' A B1233 7.357 79.551 70.667 1.00 55.02 C
ATOM 7 C4' A B1233 6.036 80.285 70.601 1.00 55.34 C
ATOM 8 O4' A B1233 6.029 81.410 71.505 1.00 55.72 O
ATOM 9 C3' A B1233 5.683 80.912 69.275 1.00 55.60 C
ATOM 10 O3' A B1233 5.243 79.922 68.379 1.00 57.70 O
ATOM 11 C2' A B1233 4.610 81.918 69.678 1.00 55.27 C
ATOM 12 O2' A B1233 3.353 81.364 70.004 1.00 53.89 O
ATOM 13 C1' A B1233 5.192 82.434 70.988 1.00 55.90 C
ATOM 14 N9 A B1233 5.995 83.640 70.800 1.00 56.72 N
ATOM 15 C8 A B1233 7.347 83.731 70.598 1.00 57.26 C
ATOM 16 N7 A B1233 7.783 84.962 70.476 1.00 56.90 N
ATOM 17 C5 A B1233 6.638 85.733 70.591 1.00 56.05 C
ATOM 18 C6 A B1233 6.429 87.106 70.532 1.00 55.35 C
ATOM 19 N6 A B1233 7.404 87.984 70.310 1.00 54.61 N
ATOM 20 N1 A B1233 5.167 87.558 70.700 1.00 55.95 N
ATOM 21 C2 A B1233 4.186 86.668 70.891 1.00 56.24 C
ATOM 22 N3 A B1233 4.257 85.345 70.946 1.00 57.10 N
ATOM 23 C4 A B1233 5.529 84.935 70.793 1.00 56.70 C
ATOM 24 P C B1234 5.597 80.060 66.832 1.00 58.82 P
ATOM 25 OP1 C B1234 4.976 78.871 66.212 1.00 58.80 O
ATOM 26 OP2 C B1234 7.064 80.289 66.668 1.00 59.14 O
ATOM 27 O5' C B1234 4.800 81.378 66.415 1.00 58.02 O
TER

Atoms:
C4: (11.783,75.446,70.738)
N3: (11.947,76.770,70.370)
OP1: (17.542,73.510,73.025)
OP2: (17.317,71.966,70.986)
C2: (13.132,77.427,70.150)
C1': (15.598,77.303,70.155)
C3': (17.665,78.005,71.053)
O5': (18.072,74.330,70.714)
O4': (16.557,76.333,69.766)
C5': (18.371,75.617,71.237)
P: (18.002,73.073,71.681)
C4': (17.861,76.691,70.317)
C2': (16.189,77.933,71.422)
O2': (15.650,79.201,71.724)
N1: (14.284,76.650,70.327)
O4: (10.645,75.020,70.983)
O2: (13.156,78.599,69.824)
C6: (14.183,75.314,70.666)
C5: (13.009,74.705,70.871)
O3': (17.882,79.116,70.194)
OP1: (9.926,78.414,69.421)
OP2: (10.748,80.841,69.397)
C3': (5.683,80.912,69.275)
C1': (5.192,82.434,70.988)
C5': (7.357,79.551,70.667)
O4': (6.029,81.410,71.505)
C8: (7.347,83.731,70.598)
O2': (3.353,81.364,70.004)
C6: (6.429,87.106,70.532)
C5: (6.638,85.733,70.591)
C4: (5.529,84.935,70.793)
P: (9.916,79.784,70.013)
C4': (6.036,80.285,70.601)
C2': (4.610,81.918,69.678)
C2: (4.186,86.668,70.891)
N1: (5.167,87.558,70.700)
N3: (4.257,85.345,70.946)
N6: (7.404,87.984,70.310)
N7: (7.783,84.962,70.476)
N9: (5.995,83.640,70.800)
O5': (8.419,80.341,70.080)
O3': (5.243,79.922,68.379)
Image (generated by PyMOL):
PyMOL image
show in jmol