ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1JJ2:0988:01233

Extra

PDB:
ATOM 1 O3' U A 987 19.097 72.122 71.188 1.00 58.08 O
ATOM 2 P U A 988 17.561 72.566 71.004 1.00 60.13 P
ATOM 3 OP1 U A 988 17.039 73.061 72.304 1.00 61.28 O
ATOM 4 OP2 U A 988 16.868 71.455 70.305 1.00 63.31 O
ATOM 5 O5' U A 988 17.626 73.811 70.016 1.00 60.69 O
ATOM 6 C5' U A 988 18.038 75.086 70.515 1.00 60.28 C
ATOM 7 C4' U A 988 17.512 76.205 69.651 1.00 58.87 C
ATOM 8 O4' U A 988 16.187 75.893 69.131 1.00 59.86 O
ATOM 9 C3' U A 988 17.360 77.496 70.443 1.00 57.93 C
ATOM 10 O3' U A 988 17.583 78.618 69.603 1.00 54.18 O
ATOM 11 C2' U A 988 15.897 77.430 70.868 1.00 59.68 C
ATOM 12 O2' U A 988 15.355 78.681 71.235 1.00 60.44 O
ATOM 13 C1' U A 988 15.257 76.852 69.604 1.00 60.93 C
ATOM 14 N1 U A 988 13.948 76.201 69.797 1.00 62.60 N
ATOM 15 C2 U A 988 12.803 76.970 69.602 1.00 63.23 C
ATOM 16 O2 U A 988 12.831 78.145 69.280 1.00 63.33 O
ATOM 17 N3 U A 988 11.619 76.306 69.796 1.00 64.54 N
ATOM 18 C4 U A 988 11.454 74.984 70.153 1.00 66.16 C
ATOM 19 O4 U A 988 10.312 74.533 70.284 1.00 68.49 O
ATOM 20 C5 U A 988 12.674 74.254 70.334 1.00 64.93 C
ATOM 21 C6 U A 988 13.849 74.870 70.158 1.00 63.88 C
ATOM 22 P U A 989 19.028 79.321 69.571 1.00 51.82 P
ATOM 23 OP1 U A 989 18.807 80.746 69.209 1.00 52.27 O
ATOM 24 OP2 U A 989 19.915 78.478 68.734 1.00 51.60 O
ATOM 25 O5' U A 989 19.565 79.251 71.070 1.00 49.78 O
TER

ATOM 1 O3' C B1232 10.001 79.209 71.052 1.00 43.52 O
ATOM 2 P A B1233 9.539 79.306 69.518 1.00 45.35 P
ATOM 3 OP1 A B1233 9.498 77.912 69.006 1.00 44.11 O
ATOM 4 OP2 A B1233 10.351 80.325 68.798 1.00 44.60 O
ATOM 5 O5' A B1233 8.051 79.866 69.621 1.00 45.27 O
ATOM 6 C5' A B1233 7.000 79.062 70.185 1.00 44.04 C
ATOM 7 C4' A B1233 5.680 79.788 70.098 1.00 44.64 C
ATOM 8 O4' A B1233 5.676 80.931 70.989 1.00 44.32 O
ATOM 9 C3' A B1233 5.333 80.393 68.750 1.00 45.18 C
ATOM 10 O3' A B1233 4.862 79.414 67.840 1.00 45.16 O
ATOM 11 C2' A B1233 4.271 81.415 69.131 1.00 45.34 C
ATOM 12 O2' A B1233 3.004 80.842 69.383 1.00 45.88 O
ATOM 13 C1' A B1233 4.838 81.946 70.450 1.00 45.97 C
ATOM 14 N9 A B1233 5.628 83.166 70.274 1.00 46.60 N
ATOM 15 C8 A B1233 6.985 83.286 70.075 1.00 47.43 C
ATOM 16 N7 A B1233 7.393 84.525 69.945 1.00 47.58 N
ATOM 17 C5 A B1233 6.229 85.273 70.067 1.00 46.82 C
ATOM 18 C6 A B1233 5.985 86.656 70.012 1.00 46.51 C
ATOM 19 N6 A B1233 6.937 87.568 69.811 1.00 46.57 N
ATOM 20 N1 A B1233 4.709 87.075 70.167 1.00 47.32 N
ATOM 21 C2 A B1233 3.751 86.158 70.357 1.00 46.66 C
ATOM 22 N3 A B1233 3.856 84.832 70.425 1.00 46.87 N
ATOM 23 C4 A B1233 5.135 84.449 70.271 1.00 46.37 C
ATOM 24 P C B1234 5.195 79.558 66.280 1.00 46.64 P
ATOM 25 OP1 C B1234 4.593 78.385 65.599 1.00 47.63 O
ATOM 26 OP2 C B1234 6.648 79.821 66.120 1.00 47.78 O
ATOM 27 O5' C B1234 4.392 80.867 65.858 1.00 44.28 O
TER

Atoms:
C4: (11.454,74.984,70.153)
N3: (11.619,76.306,69.796)
OP1: (17.039,73.061,72.304)
OP2: (16.868,71.455,70.305)
C2: (12.803,76.970,69.602)
C1': (15.257,76.852,69.604)
C3': (17.360,77.496,70.443)
O5': (17.626,73.811,70.016)
O4': (16.187,75.893,69.131)
C5': (18.038,75.086,70.515)
P: (17.561,72.566,71.004)
C4': (17.512,76.205,69.651)
C2': (15.897,77.430,70.868)
O2': (15.355,78.681,71.235)
N1: (13.948,76.201,69.797)
O4: (10.312,74.533,70.284)
O2: (12.831,78.145,69.280)
C6: (13.849,74.870,70.158)
C5: (12.674,74.254,70.334)
O3': (17.583,78.618,69.603)
OP1: (9.498,77.912,69.006)
OP2: (10.351,80.325,68.798)
C3': (5.333,80.393,68.750)
C1': (4.838,81.946,70.450)
C5': (7.000,79.062,70.185)
O4': (5.676,80.931,70.989)
C8: (6.985,83.286,70.075)
O2': (3.004,80.842,69.383)
C6: (5.985,86.656,70.012)
C5: (6.229,85.273,70.067)
C4: (5.135,84.449,70.271)
P: (9.539,79.306,69.518)
C4': (5.680,79.788,70.098)
C2': (4.271,81.415,69.131)
C2: (3.751,86.158,70.357)
N1: (4.709,87.075,70.167)
N3: (3.856,84.832,70.425)
N6: (6.937,87.568,69.811)
N7: (7.393,84.525,69.945)
N9: (5.628,83.166,70.274)
O5': (8.051,79.866,69.621)
O3': (4.862,79.414,67.840)
Image (generated by PyMOL):
PyMOL image
show in jmol