ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:02117:02065

Extra

PDB:
ATOM 1 O3' G A2116 99.138 108.986 67.951 1.00 59.27 O
ATOM 2 P G A2117 98.533 108.321 69.277 1.00 61.01 P
ATOM 3 OP1 G A2117 99.431 108.738 70.397 1.00 55.31 O
ATOM 4 OP2 G A2117 98.299 106.870 69.019 1.00 60.27 O
ATOM 5 O5' G A2117 97.106 109.023 69.429 1.00 59.01 O
ATOM 6 C5' G A2117 96.795 109.796 70.607 1.00 55.08 C
ATOM 7 C4' G A2117 96.032 111.045 70.240 1.00 49.29 C
ATOM 8 O4' G A2117 94.753 110.666 69.670 1.00 47.21 O
ATOM 9 C3' G A2117 95.723 111.946 71.433 1.00 47.46 C
ATOM 10 O3' G A2117 95.687 113.314 71.035 1.00 44.75 O
ATOM 11 C2' G A2117 94.343 111.458 71.861 1.00 46.78 C
ATOM 12 O2' G A2117 93.562 112.422 72.535 1.00 45.82 O
ATOM 13 C1' G A2117 93.707 111.094 70.522 1.00 47.20 C
ATOM 14 N9 G A2117 92.744 110.002 70.662 1.00 47.10 N
ATOM 15 C8 G A2117 91.479 109.961 70.136 1.00 46.72 C
ATOM 16 N7 G A2117 90.827 108.877 70.456 1.00 46.22 N
ATOM 17 C5 G A2117 91.717 108.151 71.232 1.00 45.17 C
ATOM 18 C6 G A2117 91.561 106.902 71.876 1.00 45.21 C
ATOM 19 O6 G A2117 90.574 106.166 71.894 1.00 46.53 O
ATOM 20 N1 G A2117 92.706 106.533 72.563 1.00 44.05 N
ATOM 21 C2 G A2117 93.852 107.268 72.628 1.00 43.50 C
ATOM 22 N2 G A2117 94.839 106.736 73.346 1.00 44.04 N
ATOM 23 N3 G A2117 94.016 108.439 72.036 1.00 45.24 N
ATOM 24 C4 G A2117 92.911 108.820 71.361 1.00 45.56 C
ATOM 25 P G A2118 97.060 114.110 70.771 1.00 40.67 P
ATOM 26 OP1 G A2118 98.042 113.124 70.278 1.00 43.64 O
ATOM 27 OP2 G A2118 97.381 114.911 71.976 1.00 37.50 O
ATOM 28 O5' G A2118 96.671 115.022 69.526 1.00 35.65 O
TER

ATOM 1 O3' A B2064 90.853 99.110 73.761 1.00 37.18 O
ATOM 2 P C B2065 91.300 98.952 72.232 1.00 40.17 P
ATOM 3 OP1 C B2065 91.830 97.580 72.044 1.00 40.77 O
ATOM 4 OP2 C B2065 92.144 100.108 71.852 1.00 40.78 O
ATOM 5 O5' C B2065 89.921 99.070 71.449 1.00 38.75 O
ATOM 6 C5' C B2065 88.938 98.028 71.544 1.00 37.25 C
ATOM 7 C4' C B2065 87.845 98.256 70.545 1.00 34.86 C
ATOM 8 O4' C B2065 87.046 99.379 70.964 1.00 36.46 O
ATOM 9 C3' C B2065 88.324 98.639 69.165 1.00 34.90 C
ATOM 10 O3' C B2065 88.678 97.485 68.423 1.00 37.39 O
ATOM 11 C2' C B2065 87.112 99.354 68.601 1.00 35.54 C
ATOM 12 O2' C B2065 86.098 98.465 68.205 1.00 37.81 O
ATOM 13 C1' C B2065 86.615 100.104 69.831 1.00 34.86 C
ATOM 14 N1 C B2065 87.157 101.462 69.922 1.00 34.90 N
ATOM 15 C2 C B2065 86.526 102.486 69.223 1.00 36.54 C
ATOM 16 O2 C B2065 85.518 102.223 68.547 1.00 36.41 O
ATOM 17 N3 C B2065 87.025 103.738 69.300 1.00 36.03 N
ATOM 18 C4 C B2065 88.104 103.980 70.043 1.00 35.34 C
ATOM 19 N4 C B2065 88.558 105.228 70.099 1.00 36.65 N
ATOM 20 C5 C B2065 88.763 102.955 70.762 1.00 35.85 C
ATOM 21 C6 C B2065 88.264 101.723 70.675 1.00 36.03 C
ATOM 22 P U B2066 89.750 97.603 67.233 1.00 37.26 P
ATOM 23 OP1 U B2066 89.840 96.267 66.586 1.00 36.41 O
ATOM 24 OP2 U B2066 90.978 98.260 67.738 1.00 39.17 O
ATOM 25 O5' U B2066 89.049 98.591 66.214 1.00 36.24 O
TER

Atoms:
OP1: (99.431,108.738,70.397)
OP2: (98.299,106.870,69.019)
C3': (95.723,111.946,71.433)
C1': (93.707,111.094,70.522)
C5': (96.795,109.796,70.607)
O6: (90.574,106.166,71.894)
O4': (94.753,110.666,69.670)
C8: (91.479,109.961,70.136)
C2: (93.852,107.268,72.628)
C6: (91.561,106.902,71.876)
C5: (91.717,108.151,71.232)
C4: (92.911,108.820,71.361)
P: (98.533,108.321,69.277)
C4': (96.032,111.045,70.240)
C2': (94.343,111.458,71.861)
O2': (93.562,112.422,72.535)
N1: (92.706,106.533,72.563)
N2: (94.839,106.736,73.346)
N3: (94.016,108.439,72.036)
N7: (90.827,108.877,70.456)
N9: (92.744,110.002,70.662)
O5': (97.106,109.023,69.429)
O3': (95.687,113.314,71.035)
C2: (86.526,102.486,69.223)
OP1: (91.830,97.580,72.044)
OP2: (92.144,100.108,71.852)
C4: (88.104,103.980,70.043)
O5': (89.921,99.070,71.449)
C3': (88.324,98.639,69.165)
C1': (86.615,100.104,69.831)
O4': (87.046,99.379,70.964)
C5': (88.938,98.028,71.544)
P: (91.300,98.952,72.232)
O2: (85.518,102.223,68.547)
C4': (87.845,98.256,70.545)
C2': (87.112,99.354,68.601)
O2': (86.098,98.465,68.205)
N1: (87.157,101.462,69.922)
N3: (87.025,103.738,69.300)
N4: (88.558,105.228,70.099)
C6: (88.264,101.723,70.675)
C5: (88.763,102.955,70.762)
O3': (88.678,97.485,68.423)
Image (generated by PyMOL):
PyMOL image
show in jmol