ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1K8A:A988:A1233

Extra

PDB:
ATOM 1 O3' U A 987 19.380 72.579 71.939 1.00 64.76 O
ATOM 2 P U A 988 17.854 73.012 71.797 1.00 66.85 P
ATOM 3 OP1 U A 988 17.398 73.422 73.150 1.00 65.75 O
ATOM 4 OP2 U A 988 17.191 71.892 71.103 1.00 67.97 O
ATOM 5 O5' U A 988 17.885 74.268 70.820 1.00 67.32 O
ATOM 6 C5' U A 988 18.316 75.543 71.289 1.00 68.36 C
ATOM 7 C4' U A 988 17.794 76.643 70.397 1.00 69.30 C
ATOM 8 O4' U A 988 16.486 76.303 69.842 1.00 70.56 O
ATOM 9 C3' U A 988 17.604 77.947 71.151 1.00 69.43 C
ATOM 10 O3' U A 988 17.844 79.067 70.311 1.00 66.54 O
ATOM 11 C2' U A 988 16.127 77.881 71.516 1.00 71.61 C
ATOM 12 O2' U A 988 15.602 79.141 71.859 1.00 71.41 O
ATOM 13 C1' U A 988 15.534 77.283 70.235 1.00 72.66 C
ATOM 14 N1 U A 988 14.215 76.638 70.405 1.00 75.16 N
ATOM 15 C2 U A 988 13.060 77.413 70.206 1.00 76.07 C
ATOM 16 O2 U A 988 13.082 78.574 69.840 1.00 75.94 O
ATOM 17 N3 U A 988 11.876 76.763 70.447 1.00 77.69 N
ATOM 18 C4 U A 988 11.713 75.446 70.840 1.00 78.59 C
ATOM 19 O4 U A 988 10.574 75.015 71.055 1.00 79.19 O
ATOM 20 C5 U A 988 12.938 74.705 70.987 1.00 76.90 C
ATOM 21 C6 U A 988 14.113 75.308 70.769 1.00 75.75 C
ATOM 22 P U A 989 19.295 79.749 70.290 1.00 63.78 P
ATOM 23 OP1 U A 989 19.134 81.188 69.989 1.00 64.59 O
ATOM 24 OP2 U A 989 20.171 78.911 69.441 1.00 64.49 O
ATOM 25 O5' U A 989 19.784 79.653 71.793 1.00 62.72 O
TER

ATOM 1 O3' C B1232 10.331 79.613 71.684 1.00 53.81 O
ATOM 2 P A B1233 9.891 79.759 70.153 1.00 54.29 P
ATOM 3 OP1 A B1233 9.902 78.407 69.528 1.00 53.65 O
ATOM 4 OP2 A B1233 10.709 80.833 69.558 1.00 54.17 O
ATOM 5 O5' A B1233 8.401 80.332 70.248 1.00 53.05 O
ATOM 6 C5' A B1233 7.332 79.556 70.828 1.00 50.37 C
ATOM 7 C4' A B1233 6.017 80.287 70.718 1.00 49.74 C
ATOM 8 O4' A B1233 5.997 81.424 71.601 1.00 49.62 O
ATOM 9 C3' A B1233 5.702 80.893 69.375 1.00 49.93 C
ATOM 10 O3' A B1233 5.249 79.895 68.493 1.00 53.11 O
ATOM 11 C2' A B1233 4.626 81.904 69.736 1.00 49.57 C
ATOM 12 O2' A B1233 3.389 81.301 70.056 1.00 49.78 O
ATOM 13 C1' A B1233 5.180 82.443 71.049 1.00 49.77 C
ATOM 14 N9 A B1233 5.989 83.652 70.885 1.00 50.27 N
ATOM 15 C8 A B1233 7.346 83.749 70.716 1.00 50.83 C
ATOM 16 N7 A B1233 7.777 84.981 70.594 1.00 49.82 N
ATOM 17 C5 A B1233 6.627 85.745 70.679 1.00 48.77 C
ATOM 18 C6 A B1233 6.412 87.115 70.604 1.00 48.21 C
ATOM 19 N6 A B1233 7.385 87.998 70.405 1.00 46.43 N
ATOM 20 N1 A B1233 5.146 87.560 70.735 1.00 48.56 N
ATOM 21 C2 A B1233 4.168 86.669 70.918 1.00 49.16 C
ATOM 22 N3 A B1233 4.245 85.349 70.994 1.00 49.35 N
ATOM 23 C4 A B1233 5.519 84.944 70.866 1.00 49.34 C
ATOM 24 P C B1234 5.598 80.015 66.944 1.00 55.25 P
ATOM 25 OP1 C B1234 4.988 78.829 66.307 1.00 55.79 O
ATOM 26 OP2 C B1234 7.063 80.233 66.829 1.00 56.47 O
ATOM 27 O5' C B1234 4.822 81.341 66.513 1.00 55.17 O
TER

Atoms:
C4: (11.713,75.446,70.840)
N3: (11.876,76.763,70.447)
OP1: (17.398,73.422,73.150)
OP2: (17.191,71.892,71.103)
C2: (13.060,77.413,70.206)
C1': (15.534,77.283,70.235)
C3': (17.604,77.947,71.151)
O5': (17.885,74.268,70.820)
O4': (16.486,76.303,69.842)
C5': (18.316,75.543,71.289)
P: (17.854,73.012,71.797)
C4': (17.794,76.643,70.397)
C2': (16.127,77.881,71.516)
O2': (15.602,79.141,71.859)
N1: (14.215,76.638,70.405)
O4: (10.574,75.015,71.055)
O2: (13.082,78.574,69.840)
C6: (14.113,75.308,70.769)
C5: (12.938,74.705,70.987)
O3': (17.844,79.067,70.311)
OP1: (9.902,78.407,69.528)
OP2: (10.709,80.833,69.558)
C3': (5.702,80.893,69.375)
C1': (5.180,82.443,71.049)
C5': (7.332,79.556,70.828)
O4': (5.997,81.424,71.601)
C8: (7.346,83.749,70.716)
O2': (3.389,81.301,70.056)
C6: (6.412,87.115,70.604)
C5: (6.627,85.745,70.679)
C4: (5.519,84.944,70.866)
P: (9.891,79.759,70.153)
C4': (6.017,80.287,70.718)
C2': (4.626,81.904,69.736)
C2: (4.168,86.669,70.918)
N1: (5.146,87.560,70.735)
N3: (4.245,85.349,70.994)
N6: (7.385,87.998,70.405)
N7: (7.777,84.981,70.594)
N9: (5.989,83.652,70.885)
O5': (8.401,80.332,70.248)
O3': (5.249,79.895,68.493)
Image (generated by PyMOL):
PyMOL image
show in jmol