ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ4:0509:013

Extra

PDB:
ATOM 1 O3' A A 508 28.335 135.265 79.430 1.00 39.99 O
ATOM 2 P A A 509 28.433 136.234 80.703 1.00 41.71 P
ATOM 3 OP1 A A 509 27.997 135.444 81.879 1.00 39.55 O
ATOM 4 OP2 A A 509 27.790 137.542 80.407 1.00 40.98 O
ATOM 5 O5' A A 509 29.985 136.525 80.847 1.00 42.54 O
ATOM 6 C5' A A 509 30.911 135.480 81.172 1.00 39.51 C
ATOM 7 C4' A A 509 32.320 136.013 81.109 1.00 36.90 C
ATOM 8 O4' A A 509 32.592 136.478 79.762 1.00 34.88 O
ATOM 9 C3' A A 509 32.589 137.253 81.947 1.00 35.17 C
ATOM 10 O3' A A 509 32.814 136.916 83.311 1.00 36.04 O
ATOM 11 C2' A A 509 33.855 137.784 81.294 1.00 36.00 C
ATOM 12 O2' A A 509 35.013 137.089 81.701 1.00 38.24 O
ATOM 13 C1' A A 509 33.596 137.468 79.817 1.00 35.25 C
ATOM 14 N9 A A 509 33.166 138.647 79.073 1.00 35.04 N
ATOM 15 C8 A A 509 31.987 139.346 79.166 1.00 35.28 C
ATOM 16 N7 A A 509 31.963 140.437 78.442 1.00 36.96 N
ATOM 17 C5 A A 509 33.198 140.440 77.801 1.00 37.71 C
ATOM 18 C6 A A 509 33.804 141.338 76.892 1.00 36.79 C
ATOM 19 N6 A A 509 33.224 142.456 76.448 1.00 36.00 N
ATOM 20 N1 A A 509 35.044 141.041 76.450 1.00 35.69 N
ATOM 21 C2 A A 509 35.625 139.920 76.882 1.00 34.88 C
ATOM 22 N3 A A 509 35.166 139.004 77.727 1.00 36.32 N
ATOM 23 C4 A A 509 33.935 139.328 78.161 1.00 36.32 C
ATOM 24 P U A 510 31.966 137.642 84.470 1.00 38.57 P
ATOM 25 OP1 U A 510 32.589 137.280 85.763 1.00 39.85 O
ATOM 26 OP2 U A 510 30.519 137.376 84.262 1.00 37.97 O
ATOM 27 O5' U A 510 32.227 139.188 84.225 1.00 35.66 O
TER

ATOM 1 O3' U B 12 34.490 148.821 74.057 1.00 40.53 O
ATOM 2 P G B 13 34.992 148.381 72.596 1.00 42.38 P
ATOM 3 OP1 G B 13 36.385 148.850 72.418 1.00 44.45 O
ATOM 4 OP2 G B 13 33.952 148.801 71.633 1.00 47.37 O
ATOM 5 O5' G B 13 35.003 146.790 72.622 1.00 43.49 O
ATOM 6 C5' G B 13 35.963 146.042 73.391 1.00 39.58 C
ATOM 7 C4' G B 13 35.633 144.573 73.308 1.00 39.90 C
ATOM 8 O4' G B 13 34.335 144.352 73.919 1.00 41.37 O
ATOM 9 C3' G B 13 35.484 144.050 71.888 1.00 39.42 C
ATOM 10 O3' G B 13 36.745 143.665 71.360 1.00 37.42 O
ATOM 11 C2' G B 13 34.521 142.882 72.054 1.00 41.17 C
ATOM 12 O2' G B 13 35.168 141.723 72.527 1.00 42.38 O
ATOM 13 C1' G B 13 33.597 143.408 73.158 1.00 41.89 C
ATOM 14 N9 G B 13 32.392 144.078 72.680 1.00 41.04 N
ATOM 15 C8 G B 13 32.305 145.357 72.196 1.00 40.41 C
ATOM 16 N7 G B 13 31.089 145.706 71.890 1.00 40.86 N
ATOM 17 C5 G B 13 30.327 144.587 72.176 1.00 40.24 C
ATOM 18 C6 G B 13 28.937 144.375 72.050 1.00 40.55 C
ATOM 19 O6 G B 13 28.078 145.165 71.652 1.00 41.39 O
ATOM 20 N1 G B 13 28.574 143.092 72.447 1.00 39.27 N
ATOM 21 C2 G B 13 29.443 142.142 72.909 1.00 39.46 C
ATOM 22 N2 G B 13 28.908 140.970 73.244 1.00 39.76 N
ATOM 23 N3 G B 13 30.746 142.330 73.035 1.00 41.55 N
ATOM 24 C4 G B 13 31.116 143.567 72.653 1.00 40.99 C
ATOM 25 P G B 14 37.042 143.844 69.791 1.00 36.93 P
ATOM 26 OP1 G B 14 38.481 143.649 69.525 1.00 38.82 O
ATOM 27 OP2 G B 14 36.398 145.111 69.390 1.00 41.67 O
ATOM 28 O5' G B 14 36.272 142.635 69.105 1.00 36.50 O
TER

Atoms:
OP1: (27.997,135.444,81.879)
OP2: (27.790,137.542,80.407)
C3': (32.589,137.253,81.947)
C1': (33.596,137.468,79.817)
C5': (30.911,135.480,81.172)
O4': (32.592,136.478,79.762)
C8: (31.987,139.346,79.166)
O2': (35.013,137.089,81.701)
C6: (33.804,141.338,76.892)
C5: (33.198,140.440,77.801)
C4: (33.935,139.328,78.161)
P: (28.433,136.234,80.703)
C4': (32.320,136.013,81.109)
C2': (33.855,137.784,81.294)
C2: (35.625,139.920,76.882)
N1: (35.044,141.041,76.450)
N3: (35.166,139.004,77.727)
N6: (33.224,142.456,76.448)
N7: (31.963,140.437,78.442)
N9: (33.166,138.647,79.073)
O5': (29.985,136.525,80.847)
O3': (32.814,136.916,83.311)
OP1: (36.385,148.850,72.418)
OP2: (33.952,148.801,71.633)
C3': (35.484,144.050,71.888)
C1': (33.597,143.408,73.158)
C5': (35.963,146.042,73.391)
O6: (28.078,145.165,71.652)
O4': (34.335,144.352,73.919)
C8: (32.305,145.357,72.196)
C2: (29.443,142.142,72.909)
C6: (28.937,144.375,72.050)
C5: (30.327,144.587,72.176)
C4: (31.116,143.567,72.653)
P: (34.992,148.381,72.596)
C4': (35.633,144.573,73.308)
C2': (34.521,142.882,72.054)
O2': (35.168,141.723,72.527)
N1: (28.574,143.092,72.447)
N2: (28.908,140.970,73.244)
N3: (30.746,142.330,73.035)
N7: (31.089,145.706,71.890)
N9: (32.392,144.078,72.680)
O5': (35.003,146.790,72.622)
O3': (36.745,143.665,71.360)
Image (generated by PyMOL):
PyMOL image
show in jmol