ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJW:0988:01233

Extra

PDB:
ATOM 1 O3' U A 987 19.175 72.743 71.406 1.00 53.87 O
ATOM 2 P U A 988 17.618 73.083 71.199 1.00 55.15 P
ATOM 3 OP1 U A 988 17.034 73.540 72.488 1.00 53.21 O
ATOM 4 OP2 U A 988 17.001 71.951 70.472 1.00 56.31 O
ATOM 5 O5' U A 988 17.639 74.323 70.207 1.00 54.47 O
ATOM 6 C5' U A 988 18.079 75.592 70.678 1.00 53.72 C
ATOM 7 C4' U A 988 17.566 76.699 69.797 1.00 53.64 C
ATOM 8 O4' U A 988 16.265 76.363 69.236 1.00 53.82 O
ATOM 9 C3' U A 988 17.376 77.991 70.574 1.00 53.52 C
ATOM 10 O3' U A 988 17.655 79.109 69.750 1.00 51.63 O
ATOM 11 C2' U A 988 15.900 77.924 70.947 1.00 54.37 C
ATOM 12 O2' U A 988 15.355 79.188 71.257 1.00 53.63 O
ATOM 13 C1' U A 988 15.296 77.291 69.689 1.00 54.73 C
ATOM 14 N1 U A 988 14.039 76.561 69.930 1.00 56.99 N
ATOM 15 C2 U A 988 12.833 77.220 69.693 1.00 58.38 C
ATOM 16 O2 U A 988 12.760 78.363 69.274 1.00 57.47 O
ATOM 17 N3 U A 988 11.711 76.480 69.964 1.00 60.16 N
ATOM 18 C4 U A 988 11.660 75.179 70.426 1.00 60.87 C
ATOM 19 O4 U A 988 10.565 74.656 70.638 1.00 62.56 O
ATOM 20 C5 U A 988 12.936 74.566 70.631 1.00 59.08 C
ATOM 21 C6 U A 988 14.051 75.258 70.385 1.00 57.78 C
ATOM 22 P U A 989 19.153 79.671 69.670 1.00 49.20 P
ATOM 23 OP1 U A 989 19.076 81.082 69.222 1.00 49.23 O
ATOM 24 OP2 U A 989 19.957 78.692 68.889 1.00 47.60 O
ATOM 25 O5' U A 989 19.663 79.630 71.177 1.00 47.42 O
TER

ATOM 1 O3' C B1232 10.186 79.493 71.131 1.00 47.46 O
ATOM 2 P A B1233 9.672 79.584 69.615 1.00 47.74 P
ATOM 3 OP1 A B1233 9.580 78.179 69.159 1.00 49.00 O
ATOM 4 OP2 A B1233 10.491 80.544 68.845 1.00 47.41 O
ATOM 5 O5' A B1233 8.207 80.196 69.749 1.00 45.75 O
ATOM 6 C5' A B1233 7.139 79.417 70.307 1.00 43.99 C
ATOM 7 C4' A B1233 5.835 80.172 70.234 1.00 44.52 C
ATOM 8 O4' A B1233 5.876 81.319 71.118 1.00 45.60 O
ATOM 9 C3' A B1233 5.477 80.787 68.898 1.00 45.57 C
ATOM 10 O3' A B1233 5.006 79.839 67.960 1.00 47.22 O
ATOM 11 C2' A B1233 4.441 81.828 69.300 1.00 45.90 C
ATOM 12 O2' A B1233 3.167 81.294 69.602 1.00 45.03 O
ATOM 13 C1' A B1233 5.058 82.357 70.592 1.00 45.79 C
ATOM 14 N9 A B1233 5.885 83.545 70.369 1.00 46.43 N
ATOM 15 C8 A B1233 7.235 83.623 70.109 1.00 46.36 C
ATOM 16 N7 A B1233 7.673 84.848 69.951 1.00 46.08 N
ATOM 17 C5 A B1233 6.537 85.631 70.118 1.00 46.34 C
ATOM 18 C6 A B1233 6.328 87.020 70.070 1.00 46.09 C
ATOM 19 N6 A B1233 7.292 87.907 69.820 1.00 46.43 N
ATOM 20 N1 A B1233 5.075 87.473 70.284 1.00 45.88 N
ATOM 21 C2 A B1233 4.104 86.586 70.524 1.00 45.64 C
ATOM 22 N3 A B1233 4.174 85.262 70.592 1.00 45.28 N
ATOM 23 C4 A B1233 5.432 84.842 70.378 1.00 45.92 C
ATOM 24 P C B1234 5.417 79.999 66.417 1.00 48.85 P
ATOM 25 OP1 C B1234 4.960 78.791 65.697 1.00 48.85 O
ATOM 26 OP2 C B1234 6.852 80.377 66.364 1.00 50.82 O
ATOM 27 O5' C B1234 4.556 81.250 65.937 1.00 46.08 O
TER

Atoms:
C4: (11.660,75.179,70.426)
N3: (11.711,76.480,69.964)
OP1: (17.034,73.540,72.488)
OP2: (17.001,71.951,70.472)
C2: (12.833,77.220,69.693)
C1': (15.296,77.291,69.689)
C3': (17.376,77.991,70.574)
O5': (17.639,74.323,70.207)
O4': (16.265,76.363,69.236)
C5': (18.079,75.592,70.678)
P: (17.618,73.083,71.199)
C4': (17.566,76.699,69.797)
C2': (15.900,77.924,70.947)
O2': (15.355,79.188,71.257)
N1: (14.039,76.561,69.930)
O4: (10.565,74.656,70.638)
O2: (12.760,78.363,69.274)
C6: (14.051,75.258,70.385)
C5: (12.936,74.566,70.631)
O3': (17.655,79.109,69.750)
OP1: (9.580,78.179,69.159)
OP2: (10.491,80.544,68.845)
C3': (5.477,80.787,68.898)
C1': (5.058,82.357,70.592)
C5': (7.139,79.417,70.307)
O4': (5.876,81.319,71.118)
C8: (7.235,83.623,70.109)
O2': (3.167,81.294,69.602)
C6: (6.328,87.020,70.070)
C5: (6.537,85.631,70.118)
C4: (5.432,84.842,70.378)
P: (9.672,79.584,69.615)
C4': (5.835,80.172,70.234)
C2': (4.441,81.828,69.300)
C2: (4.104,86.586,70.524)
N1: (5.075,87.473,70.284)
N3: (4.174,85.262,70.592)
N6: (7.292,87.907,69.820)
N7: (7.673,84.848,69.951)
N9: (5.885,83.545,70.369)
O5': (8.207,80.196,69.749)
O3': (5.006,79.839,67.960)
Image (generated by PyMOL):
PyMOL image
show in jmol