ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQO:0988:01233

Extra

PDB:
ATOM 1 O3' U A 987 19.251 72.094 71.320 1.00 70.51 O
ATOM 2 P U A 988 17.716 72.543 71.132 1.00 72.07 P
ATOM 3 OP1 U A 988 17.134 72.960 72.433 1.00 72.79 O
ATOM 4 OP2 U A 988 17.060 71.472 70.344 1.00 75.37 O
ATOM 5 O5' U A 988 17.799 73.837 70.206 1.00 73.34 O
ATOM 6 C5' U A 988 18.193 75.102 70.761 1.00 73.43 C
ATOM 7 C4' U A 988 17.720 76.243 69.888 1.00 72.92 C
ATOM 8 O4' U A 988 16.382 75.972 69.380 1.00 73.89 O
ATOM 9 C3' U A 988 17.620 77.563 70.641 1.00 72.54 C
ATOM 10 O3' U A 988 17.854 78.658 69.753 1.00 70.45 O
ATOM 11 C2' U A 988 16.165 77.545 71.098 1.00 73.14 C
ATOM 12 O2' U A 988 15.664 78.819 71.442 1.00 73.80 O
ATOM 13 C1' U A 988 15.486 76.958 69.858 1.00 74.67 C
ATOM 14 N1 U A 988 14.166 76.336 70.070 1.00 76.20 N
ATOM 15 C2 U A 988 13.039 77.064 69.697 1.00 76.55 C
ATOM 16 O2 U A 988 13.094 78.179 69.201 1.00 76.44 O
ATOM 17 N3 U A 988 11.840 76.436 69.927 1.00 77.92 N
ATOM 18 C4 U A 988 11.645 75.182 70.471 1.00 78.75 C
ATOM 19 O4 U A 988 10.494 74.757 70.615 1.00 78.97 O
ATOM 20 C5 U A 988 12.852 74.487 70.820 1.00 78.30 C
ATOM 21 C6 U A 988 14.040 75.073 70.616 1.00 77.10 C
ATOM 22 P U A 989 19.298 79.374 69.717 1.00 69.07 P
ATOM 23 OP1 U A 989 19.093 80.788 69.300 1.00 69.62 O
ATOM 24 OP2 U A 989 20.210 78.503 68.928 1.00 68.89 O
ATOM 25 O5' U A 989 19.804 79.359 71.231 1.00 67.22 O
TER

ATOM 1 O3' C B1232 10.330 79.513 71.031 1.00 54.89 O
ATOM 2 P A B1233 9.812 79.619 69.511 1.00 54.80 P
ATOM 3 OP1 A B1233 9.783 78.236 68.976 1.00 56.45 O
ATOM 4 OP2 A B1233 10.590 80.660 68.798 1.00 55.25 O
ATOM 5 O5' A B1233 8.315 80.140 69.655 1.00 53.33 O
ATOM 6 C5' A B1233 7.293 79.295 70.214 1.00 51.42 C
ATOM 7 C4' A B1233 5.952 79.986 70.163 1.00 50.43 C
ATOM 8 O4' A B1233 5.952 81.137 71.044 1.00 51.85 O
ATOM 9 C3' A B1233 5.559 80.569 68.818 1.00 50.48 C
ATOM 10 O3' A B1233 5.054 79.572 67.944 1.00 50.37 O
ATOM 11 C2' A B1233 4.505 81.595 69.212 1.00 50.81 C
ATOM 12 O2' A B1233 3.255 81.015 69.508 1.00 52.64 O
ATOM 13 C1' A B1233 5.101 82.146 70.509 1.00 51.20 C
ATOM 14 N9 A B1233 5.886 83.365 70.296 1.00 49.88 N
ATOM 15 C8 A B1233 7.245 83.488 70.132 1.00 49.33 C
ATOM 16 N7 A B1233 7.648 84.723 69.952 1.00 49.08 N
ATOM 17 C5 A B1233 6.476 85.466 70.001 1.00 49.90 C
ATOM 18 C6 A B1233 6.223 86.843 69.871 1.00 49.82 C
ATOM 19 N6 A B1233 7.173 87.749 69.652 1.00 50.19 N
ATOM 20 N1 A B1233 4.943 87.258 69.969 1.00 50.70 N
ATOM 21 C2 A B1233 3.987 86.344 70.177 1.00 50.45 C
ATOM 22 N3 A B1233 4.098 85.023 70.312 1.00 49.30 N
ATOM 23 C4 A B1233 5.383 84.643 70.214 1.00 49.79 C
ATOM 24 P C B1234 5.330 79.689 66.369 1.00 49.38 P
ATOM 25 OP1 C B1234 4.698 78.501 65.734 1.00 53.56 O
ATOM 26 OP2 C B1234 6.770 79.948 66.157 1.00 50.99 O
ATOM 27 O5' C B1234 4.521 80.986 65.937 1.00 47.70 O
TER

Atoms:
C4: (11.645,75.182,70.471)
N3: (11.840,76.436,69.927)
OP1: (17.134,72.960,72.433)
OP2: (17.060,71.472,70.344)
C2: (13.039,77.064,69.697)
C1': (15.486,76.958,69.858)
C3': (17.620,77.563,70.641)
O5': (17.799,73.837,70.206)
O4': (16.382,75.972,69.380)
C5': (18.193,75.102,70.761)
P: (17.716,72.543,71.132)
C4': (17.720,76.243,69.888)
C2': (16.165,77.545,71.098)
O2': (15.664,78.819,71.442)
N1: (14.166,76.336,70.070)
O4: (10.494,74.757,70.615)
O2: (13.094,78.179,69.201)
C6: (14.040,75.073,70.616)
C5: (12.852,74.487,70.820)
O3': (17.854,78.658,69.753)
OP1: (9.783,78.236,68.976)
OP2: (10.590,80.660,68.798)
C3': (5.559,80.569,68.818)
C1': (5.101,82.146,70.509)
C5': (7.293,79.295,70.214)
O4': (5.952,81.137,71.044)
C8: (7.245,83.488,70.132)
O2': (3.255,81.015,69.508)
C6: (6.223,86.843,69.871)
C5: (6.476,85.466,70.001)
C4: (5.383,84.643,70.214)
P: (9.812,79.619,69.511)
C4': (5.952,79.986,70.163)
C2': (4.505,81.595,69.212)
C2: (3.987,86.344,70.177)
N1: (4.943,87.258,69.969)
N3: (4.098,85.023,70.312)
N6: (7.173,87.749,69.652)
N7: (7.648,84.723,69.952)
N9: (5.886,83.365,70.296)
O5': (8.315,80.140,69.655)
O3': (5.054,79.572,67.944)
Image (generated by PyMOL):
PyMOL image
show in jmol