ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3SLM:A19:A49

Extra

PDB:
ATOM 1 O3' A A 18 -9.488 14.634 29.443 1.00 37.12 O
ATOM 2 P U A 19 -10.870 14.389 30.235 1.00 37.70 P
ATOM 3 OP1 U A 19 -11.948 14.999 29.417 1.00 36.72 O
ATOM 4 OP2 U A 19 -10.677 14.867 31.625 1.00 30.64 O
ATOM 5 O5' U A 19 -11.011 12.796 30.233 1.00 37.98 O
ATOM 6 C5' U A 19 -11.320 12.077 29.038 1.00 36.70 C
ATOM 7 C4' U A 19 -12.110 10.817 29.332 1.00 36.05 C
ATOM 8 O4' U A 19 -11.224 9.876 29.995 1.00 35.20 O
ATOM 9 C3' U A 19 -13.328 11.018 30.248 1.00 37.20 C
ATOM 10 O3' U A 19 -14.585 10.588 29.647 1.00 44.06 O
ATOM 11 C2' U A 19 -13.015 10.232 31.529 1.00 36.04 C
ATOM 12 O2' U A 19 -14.091 9.466 32.034 1.00 33.85 O
ATOM 13 C1' U A 19 -11.821 9.347 31.163 1.00 36.43 C
ATOM 14 N1 U A 19 -10.800 9.320 32.227 1.00 32.86 N
ATOM 15 C2 U A 19 -10.633 8.183 33.010 1.00 35.41 C
ATOM 16 O2 U A 19 -11.252 7.145 32.839 1.00 36.36 O
ATOM 17 N3 U A 19 -9.686 8.292 33.995 1.00 30.63 N
ATOM 18 C4 U A 19 -8.925 9.409 34.280 1.00 30.45 C
ATOM 19 O4 U A 19 -8.112 9.367 35.198 1.00 33.48 O
ATOM 20 C5 U A 19 -9.170 10.545 33.449 1.00 30.75 C
ATOM 21 C6 U A 19 -10.089 10.465 32.479 1.00 32.53 C
ATOM 22 P A A 20 -14.738 9.235 28.784 1.00 44.12 P
ATOM 23 OP1 A A 20 -16.180 8.990 28.611 1.00 31.09 O
ATOM 24 OP2 A A 20 -13.924 8.195 29.445 1.00 47.90 O
ATOM 25 O5' A A 20 -14.099 9.625 27.383 1.00 41.43 O
TER

ATOM 1 O3' U B 48 -10.197 4.211 34.636 1.00 38.25 O
ATOM 2 P A B 49 -9.212 4.938 35.660 1.00 32.80 P
ATOM 3 OP1 A B 49 -9.344 4.241 36.963 1.00 33.12 O
ATOM 4 OP2 A B 49 -9.511 6.389 35.588 1.00 38.60 O
ATOM 5 O5' A B 49 -7.785 4.646 35.032 1.00 33.55 O
ATOM 6 C5' A B 49 -7.421 3.327 34.649 1.00 33.26 C
ATOM 7 C4' A B 49 -6.478 3.334 33.485 1.00 31.11 C
ATOM 8 O4' A B 49 -7.172 3.848 32.314 1.00 35.85 O
ATOM 9 C3' A B 49 -5.232 4.210 33.663 1.00 30.86 C
ATOM 10 O3' A B 49 -4.120 3.593 33.036 1.00 37.57 O
ATOM 11 C2' A B 49 -5.577 5.455 32.871 1.00 27.25 C
ATOM 12 O2' A B 49 -4.454 6.148 32.383 1.00 33.64 O
ATOM 13 C1' A B 49 -6.386 4.869 31.732 1.00 29.94 C
ATOM 14 N9 A B 49 -7.255 5.843 31.085 1.00 29.46 N
ATOM 15 C8 A B 49 -8.343 6.482 31.615 1.00 31.49 C
ATOM 16 N7 A B 49 -8.880 7.341 30.793 1.00 31.94 N
ATOM 17 C5 A B 49 -8.086 7.274 29.660 1.00 28.10 C
ATOM 18 C6 A B 49 -8.141 7.956 28.437 1.00 29.72 C
ATOM 19 N6 A B 49 -9.081 8.869 28.144 1.00 29.93 N
ATOM 20 N1 A B 49 -7.191 7.657 27.521 1.00 29.07 N
ATOM 21 C2 A B 49 -6.259 6.744 27.824 1.00 31.16 C
ATOM 22 N3 A B 49 -6.111 6.041 28.947 1.00 32.74 N
ATOM 23 C4 A B 49 -7.069 6.362 29.834 1.00 28.71 C
ATOM 24 P U B 50 -3.073 2.721 33.875 1.00 38.24 P
ATOM 25 OP1 U B 50 -3.833 2.000 34.931 1.00 37.93 O
ATOM 26 OP2 U B 50 -1.967 3.614 34.278 1.00 34.86 O
ATOM 27 O5' U B 50 -2.568 1.702 32.776 1.00 38.89 O
TER

Atoms:
C4: (-8.925,9.409,34.280)
N3: (-9.686,8.292,33.995)
OP1: (-11.948,14.999,29.417)
OP2: (-10.677,14.867,31.625)
C2: (-10.633,8.183,33.010)
C1': (-11.821,9.347,31.163)
C3': (-13.328,11.018,30.248)
O5': (-11.011,12.796,30.233)
O4': (-11.224,9.876,29.995)
C5': (-11.320,12.077,29.038)
P: (-10.870,14.389,30.235)
C4': (-12.110,10.817,29.332)
C2': (-13.015,10.232,31.529)
O2': (-14.091,9.466,32.034)
N1: (-10.800,9.320,32.227)
O4: (-8.112,9.367,35.198)
O2: (-11.252,7.145,32.839)
C6: (-10.089,10.465,32.479)
C5: (-9.170,10.545,33.449)
O3': (-14.585,10.588,29.647)
OP1: (-9.344,4.241,36.963)
OP2: (-9.511,6.389,35.588)
C3': (-5.232,4.210,33.663)
C1': (-6.386,4.869,31.732)
C5': (-7.421,3.327,34.649)
O4': (-7.172,3.848,32.314)
C8: (-8.343,6.482,31.615)
O2': (-4.454,6.148,32.383)
C6: (-8.141,7.956,28.437)
C5: (-8.086,7.274,29.660)
C4: (-7.069,6.362,29.834)
P: (-9.212,4.938,35.660)
C4': (-6.478,3.334,33.485)
C2': (-5.577,5.455,32.871)
C2: (-6.259,6.744,27.824)
N1: (-7.191,7.657,27.521)
N3: (-6.111,6.041,28.947)
N6: (-9.081,8.869,28.144)
N7: (-8.880,7.341,30.793)
N9: (-7.255,5.843,31.085)
O5': (-7.785,4.646,35.032)
O3': (-4.120,3.593,33.036)
Image (generated by PyMOL):
PyMOL image
show in jmol