Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A500:A475
Extra
PDB:
ATOM 1 O3' G A 499 -9.188 156.241 224.269 1.00 7.91 O
ATOM 2 P A A 500 -9.614 156.548 225.771 1.00 0.40 P
ATOM 3 OP1 A A 500 -9.259 157.974 226.047 1.00 0.40 O
ATOM 4 OP2 A A 500 -9.012 155.459 226.618 1.00 0.40 O
ATOM 5 O5' A A 500 -11.203 156.376 225.727 1.00 0.40 O
ATOM 6 C5' A A 500 -11.951 156.210 226.927 1.00 0.40 C
ATOM 7 C4' A A 500 -13.378 155.809 226.643 1.00 0.40 C
ATOM 8 O4' A A 500 -14.048 156.847 225.897 1.00 0.40 O
ATOM 9 C3' A A 500 -13.547 154.583 225.796 1.00 0.40 C
ATOM 10 O3' A A 500 -13.461 153.415 226.546 1.00 0.40 O
ATOM 11 C2' A A 500 -14.896 154.791 225.159 1.00 0.40 C
ATOM 12 O2' A A 500 -15.922 154.515 226.082 1.00 0.40 O
ATOM 13 C1' A A 500 -14.867 156.283 224.912 1.00 0.40 C
ATOM 14 N9 A A 500 -14.282 156.622 223.609 1.00 0.37 N
ATOM 15 C8 A A 500 -12.981 156.996 223.410 1.00 0.37 C
ATOM 16 N7 A A 500 -12.721 157.265 222.157 1.00 0.37 N
ATOM 17 C5 A A 500 -13.927 157.071 221.494 1.00 0.37 C
ATOM 18 C6 A A 500 -14.302 157.199 220.153 1.00 0.37 C
ATOM 19 N6 A A 500 -13.469 157.566 219.172 1.00 0.37 N
ATOM 20 N1 A A 500 -15.578 156.931 219.840 1.00 0.37 N
ATOM 21 C2 A A 500 -16.416 156.563 220.802 1.00 0.37 C
ATOM 22 N3 A A 500 -16.179 156.397 222.092 1.00 0.37 N
ATOM 23 C4 A A 500 -14.903 156.680 222.381 1.00 0.37 C
ATOM 24 P A A 501 -12.647 152.213 225.952 1.00 0.74 P
ATOM 25 OP1 A A 501 -12.570 151.166 226.985 1.00 0.74 O
ATOM 26 OP2 A A 501 -11.389 152.784 225.403 1.00 0.74 O
ATOM 27 O5' A A 501 -13.596 151.741 224.792 1.00 0.74 O
TER
ATOM 1 O3' C B 474 -13.973 153.995 211.476 1.00 3.98 O
ATOM 2 P G B 475 -14.518 155.472 211.818 1.00 1.23 P
ATOM 3 OP1 G B 475 -15.888 155.326 212.368 1.00 1.23 O
ATOM 4 OP2 G B 475 -14.319 156.316 210.610 1.00 1.23 O
ATOM 5 O5' G B 475 -13.543 155.946 212.953 1.00 1.23 O
ATOM 6 C5' G B 475 -13.560 155.335 214.211 1.00 1.23 C
ATOM 7 C4' G B 475 -12.429 155.834 215.016 1.00 1.23 C
ATOM 8 O4' G B 475 -11.188 155.318 214.471 1.00 1.23 O
ATOM 9 C3' G B 475 -12.249 157.334 214.984 1.00 1.23 C
ATOM 10 O3' G B 475 -13.129 157.995 215.874 1.00 1.23 O
ATOM 11 C2' G B 475 -10.781 157.487 215.354 1.00 1.23 C
ATOM 12 O2' G B 475 -10.599 157.416 216.759 1.00 1.23 O
ATOM 13 C1' G B 475 -10.156 156.243 214.696 1.00 1.23 C
ATOM 14 N9 G B 475 -9.534 156.606 213.422 1.00 1.39 N
ATOM 15 C8 G B 475 -10.076 156.894 212.207 1.00 1.39 C
ATOM 16 N7 G B 475 -9.180 157.292 211.349 1.00 1.39 N
ATOM 17 C5 G B 475 -8.015 157.317 212.070 1.00 1.39 C
ATOM 18 C6 G B 475 -6.717 157.699 211.710 1.00 1.39 C
ATOM 19 O6 G B 475 -6.318 158.100 210.613 1.00 1.39 O
ATOM 20 N1 G B 475 -5.817 157.587 212.755 1.00 1.39 N
ATOM 21 C2 G B 475 -6.139 157.149 214.000 1.00 1.39 C
ATOM 22 N2 G B 475 -5.132 157.124 214.866 1.00 1.39 N
ATOM 23 N3 G B 475 -7.348 156.787 214.374 1.00 1.39 N
ATOM 24 C4 G B 475 -8.217 156.911 213.350 1.00 1.39 C
ATOM 25 P A B 476 -13.688 159.471 215.565 1.00 7.20 P
ATOM 26 OP1 A B 476 -14.084 160.048 216.875 1.00 7.20 O
ATOM 27 OP2 A B 476 -14.704 159.352 214.485 1.00 7.20 O
ATOM 28 O5' A B 476 -12.435 160.264 215.010 1.00 7.20 O
TER
ATOM 2 P A A 500 -9.614 156.548 225.771 1.00 0.40 P
ATOM 3 OP1 A A 500 -9.259 157.974 226.047 1.00 0.40 O
ATOM 4 OP2 A A 500 -9.012 155.459 226.618 1.00 0.40 O
ATOM 5 O5' A A 500 -11.203 156.376 225.727 1.00 0.40 O
ATOM 6 C5' A A 500 -11.951 156.210 226.927 1.00 0.40 C
ATOM 7 C4' A A 500 -13.378 155.809 226.643 1.00 0.40 C
ATOM 8 O4' A A 500 -14.048 156.847 225.897 1.00 0.40 O
ATOM 9 C3' A A 500 -13.547 154.583 225.796 1.00 0.40 C
ATOM 10 O3' A A 500 -13.461 153.415 226.546 1.00 0.40 O
ATOM 11 C2' A A 500 -14.896 154.791 225.159 1.00 0.40 C
ATOM 12 O2' A A 500 -15.922 154.515 226.082 1.00 0.40 O
ATOM 13 C1' A A 500 -14.867 156.283 224.912 1.00 0.40 C
ATOM 14 N9 A A 500 -14.282 156.622 223.609 1.00 0.37 N
ATOM 15 C8 A A 500 -12.981 156.996 223.410 1.00 0.37 C
ATOM 16 N7 A A 500 -12.721 157.265 222.157 1.00 0.37 N
ATOM 17 C5 A A 500 -13.927 157.071 221.494 1.00 0.37 C
ATOM 18 C6 A A 500 -14.302 157.199 220.153 1.00 0.37 C
ATOM 19 N6 A A 500 -13.469 157.566 219.172 1.00 0.37 N
ATOM 20 N1 A A 500 -15.578 156.931 219.840 1.00 0.37 N
ATOM 21 C2 A A 500 -16.416 156.563 220.802 1.00 0.37 C
ATOM 22 N3 A A 500 -16.179 156.397 222.092 1.00 0.37 N
ATOM 23 C4 A A 500 -14.903 156.680 222.381 1.00 0.37 C
ATOM 24 P A A 501 -12.647 152.213 225.952 1.00 0.74 P
ATOM 25 OP1 A A 501 -12.570 151.166 226.985 1.00 0.74 O
ATOM 26 OP2 A A 501 -11.389 152.784 225.403 1.00 0.74 O
ATOM 27 O5' A A 501 -13.596 151.741 224.792 1.00 0.74 O
TER
ATOM 1 O3' C B 474 -13.973 153.995 211.476 1.00 3.98 O
ATOM 2 P G B 475 -14.518 155.472 211.818 1.00 1.23 P
ATOM 3 OP1 G B 475 -15.888 155.326 212.368 1.00 1.23 O
ATOM 4 OP2 G B 475 -14.319 156.316 210.610 1.00 1.23 O
ATOM 5 O5' G B 475 -13.543 155.946 212.953 1.00 1.23 O
ATOM 6 C5' G B 475 -13.560 155.335 214.211 1.00 1.23 C
ATOM 7 C4' G B 475 -12.429 155.834 215.016 1.00 1.23 C
ATOM 8 O4' G B 475 -11.188 155.318 214.471 1.00 1.23 O
ATOM 9 C3' G B 475 -12.249 157.334 214.984 1.00 1.23 C
ATOM 10 O3' G B 475 -13.129 157.995 215.874 1.00 1.23 O
ATOM 11 C2' G B 475 -10.781 157.487 215.354 1.00 1.23 C
ATOM 12 O2' G B 475 -10.599 157.416 216.759 1.00 1.23 O
ATOM 13 C1' G B 475 -10.156 156.243 214.696 1.00 1.23 C
ATOM 14 N9 G B 475 -9.534 156.606 213.422 1.00 1.39 N
ATOM 15 C8 G B 475 -10.076 156.894 212.207 1.00 1.39 C
ATOM 16 N7 G B 475 -9.180 157.292 211.349 1.00 1.39 N
ATOM 17 C5 G B 475 -8.015 157.317 212.070 1.00 1.39 C
ATOM 18 C6 G B 475 -6.717 157.699 211.710 1.00 1.39 C
ATOM 19 O6 G B 475 -6.318 158.100 210.613 1.00 1.39 O
ATOM 20 N1 G B 475 -5.817 157.587 212.755 1.00 1.39 N
ATOM 21 C2 G B 475 -6.139 157.149 214.000 1.00 1.39 C
ATOM 22 N2 G B 475 -5.132 157.124 214.866 1.00 1.39 N
ATOM 23 N3 G B 475 -7.348 156.787 214.374 1.00 1.39 N
ATOM 24 C4 G B 475 -8.217 156.911 213.350 1.00 1.39 C
ATOM 25 P A B 476 -13.688 159.471 215.565 1.00 7.20 P
ATOM 26 OP1 A B 476 -14.084 160.048 216.875 1.00 7.20 O
ATOM 27 OP2 A B 476 -14.704 159.352 214.485 1.00 7.20 O
ATOM 28 O5' A B 476 -12.435 160.264 215.010 1.00 7.20 O
TER
Atoms:
OP1: (-9.259,157.974,226.047)
OP2: (-9.012,155.459,226.618)
C3': (-13.547,154.583,225.796)
C1': (-14.867,156.283,224.912)
C5': (-11.951,156.210,226.927)
O4': (-14.048,156.847,225.897)
C8: (-12.981,156.996,223.410)
O2': (-15.922,154.515,226.082)
C6: (-14.302,157.199,220.153)
C5: (-13.927,157.071,221.494)
C4: (-14.903,156.680,222.381)
P: (-9.614,156.548,225.771)
C4': (-13.378,155.809,226.643)
C2': (-14.896,154.791,225.159)
C2: (-16.416,156.563,220.802)
N1: (-15.578,156.931,219.840)
N3: (-16.179,156.397,222.092)
N6: (-13.469,157.566,219.172)
N7: (-12.721,157.265,222.157)
N9: (-14.282,156.622,223.609)
O5': (-11.203,156.376,225.727)
O3': (-13.461,153.415,226.546)
OP2: (-9.012,155.459,226.618)
C3': (-13.547,154.583,225.796)
C1': (-14.867,156.283,224.912)
C5': (-11.951,156.210,226.927)
O4': (-14.048,156.847,225.897)
C8: (-12.981,156.996,223.410)
O2': (-15.922,154.515,226.082)
C6: (-14.302,157.199,220.153)
C5: (-13.927,157.071,221.494)
C4: (-14.903,156.680,222.381)
P: (-9.614,156.548,225.771)
C4': (-13.378,155.809,226.643)
C2': (-14.896,154.791,225.159)
C2: (-16.416,156.563,220.802)
N1: (-15.578,156.931,219.840)
N3: (-16.179,156.397,222.092)
N6: (-13.469,157.566,219.172)
N7: (-12.721,157.265,222.157)
N9: (-14.282,156.622,223.609)
O5': (-11.203,156.376,225.727)
O3': (-13.461,153.415,226.546)
OP1: (-15.888,155.326,212.368)
OP2: (-14.319,156.316,210.610)
C3': (-12.249,157.334,214.984)
C1': (-10.156,156.243,214.696)
C5': (-13.560,155.335,214.211)
O6: (-6.318,158.100,210.613)
O4': (-11.188,155.318,214.471)
C8: (-10.076,156.894,212.207)
C2: (-6.139,157.149,214.000)
C6: (-6.717,157.699,211.710)
C5: (-8.015,157.317,212.070)
C4: (-8.217,156.911,213.350)
P: (-14.518,155.472,211.818)
C4': (-12.429,155.834,215.016)
C2': (-10.781,157.487,215.354)
O2': (-10.599,157.416,216.759)
N1: (-5.817,157.587,212.755)
N2: (-5.132,157.124,214.866)
N3: (-7.348,156.787,214.374)
N7: (-9.180,157.292,211.349)
N9: (-9.534,156.606,213.422)
O5': (-13.543,155.946,212.953)
O3': (-13.129,157.995,215.874)
OP2: (-14.319,156.316,210.610)
C3': (-12.249,157.334,214.984)
C1': (-10.156,156.243,214.696)
C5': (-13.560,155.335,214.211)
O6: (-6.318,158.100,210.613)
O4': (-11.188,155.318,214.471)
C8: (-10.076,156.894,212.207)
C2: (-6.139,157.149,214.000)
C6: (-6.717,157.699,211.710)
C5: (-8.015,157.317,212.070)
C4: (-8.217,156.911,213.350)
P: (-14.518,155.472,211.818)
C4': (-12.429,155.834,215.016)
C2': (-10.781,157.487,215.354)
O2': (-10.599,157.416,216.759)
N1: (-5.817,157.587,212.755)
N2: (-5.132,157.124,214.866)
N3: (-7.348,156.787,214.374)
N7: (-9.180,157.292,211.349)
N9: (-9.534,156.606,213.422)
O5': (-13.543,155.946,212.953)
O3': (-13.129,157.995,215.874)
Image (generated by PyMOL):