Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2DVI:B13:B16
Extra
PDB:
ATOM 1 O3' U A 12 -22.497 0.992 -12.427 1.00 58.57 O
ATOM 2 P U A 13 -23.207 2.119 -11.532 1.00 60.08 P
ATOM 3 OP1 U A 13 -23.977 1.423 -10.463 1.00 59.77 O
ATOM 4 OP2 U A 13 -23.903 3.068 -12.449 1.00 56.10 O
ATOM 5 O5' U A 13 -21.982 2.873 -10.847 1.00 56.38 O
ATOM 6 C5' U A 13 -21.201 2.219 -9.854 1.00 54.21 C
ATOM 7 C4' U A 13 -20.152 3.157 -9.314 1.00 52.97 C
ATOM 8 O4' U A 13 -19.190 3.470 -10.357 1.00 51.70 O
ATOM 9 C3' U A 13 -20.651 4.523 -8.879 1.00 52.79 C
ATOM 10 O3' U A 13 -21.239 4.491 -7.585 1.00 52.40 O
ATOM 11 C2' U A 13 -19.365 5.331 -8.897 1.00 52.15 C
ATOM 12 O2' U A 13 -18.569 5.051 -7.764 1.00 53.23 O
ATOM 13 C1' U A 13 -18.689 4.784 -10.159 1.00 51.28 C
ATOM 14 N1 U A 13 -19.012 5.597 -11.342 1.00 49.18 N
ATOM 15 C2 U A 13 -18.184 6.670 -11.626 1.00 48.63 C
ATOM 16 O2 U A 13 -17.175 6.917 -10.988 1.00 50.28 O
ATOM 17 N3 U A 13 -18.578 7.439 -12.691 1.00 47.57 N
ATOM 18 C4 U A 13 -19.684 7.245 -13.491 1.00 46.76 C
ATOM 19 O4 U A 13 -19.963 8.087 -14.342 1.00 47.13 O
ATOM 20 C5 U A 13 -20.467 6.091 -13.162 1.00 45.45 C
ATOM 21 C6 U A 13 -20.111 5.325 -12.124 1.00 48.31 C
ATOM 22 P C A 14 -22.608 5.289 -7.323 1.00 50.53 P
ATOM 23 OP1 C A 14 -23.366 4.597 -6.249 1.00 52.01 O
ATOM 24 OP2 C A 14 -23.238 5.487 -8.647 1.00 53.17 O
ATOM 25 O5' C A 14 -22.120 6.714 -6.810 1.00 49.36 O
TER
ATOM 1 O3' G B 15 -16.073 11.515 -11.275 1.00 59.43 O
ATOM 2 P A B 16 -15.892 10.806 -12.703 1.00 62.49 P
ATOM 3 OP1 A B 16 -15.623 11.878 -13.697 1.00 60.99 O
ATOM 4 OP2 A B 16 -17.027 9.865 -12.920 1.00 60.58 O
ATOM 5 O5' A B 16 -14.554 9.969 -12.521 1.00 63.35 O
ATOM 6 C5' A B 16 -13.319 10.641 -12.347 1.00 67.92 C
ATOM 7 C4' A B 16 -12.239 9.930 -13.111 1.00 71.45 C
ATOM 8 O4' A B 16 -11.999 8.648 -12.478 1.00 71.23 O
ATOM 9 C3' A B 16 -12.578 9.589 -14.554 1.00 74.32 C
ATOM 10 O3' A B 16 -12.474 10.730 -15.430 1.00 80.56 O
ATOM 11 C2' A B 16 -11.696 8.377 -14.819 1.00 73.36 C
ATOM 12 O2' A B 16 -10.346 8.700 -15.069 1.00 74.61 O
ATOM 13 C1' A B 16 -11.754 7.664 -13.465 1.00 71.36 C
ATOM 14 N9 A B 16 -12.772 6.621 -13.328 1.00 68.77 N
ATOM 15 C8 A B 16 -14.024 6.550 -13.892 1.00 68.70 C
ATOM 16 N7 A B 16 -14.701 5.480 -13.542 1.00 66.36 N
ATOM 17 C5 A B 16 -13.836 4.802 -12.695 1.00 66.18 C
ATOM 18 C6 A B 16 -13.960 3.594 -11.988 1.00 66.84 C
ATOM 19 N6 A B 16 -15.055 2.832 -12.011 1.00 66.83 N
ATOM 20 N1 A B 16 -12.906 3.192 -11.242 1.00 66.71 N
ATOM 21 C2 A B 16 -11.809 3.965 -11.212 1.00 66.88 C
ATOM 22 N3 A B 16 -11.576 5.123 -11.828 1.00 65.42 N
ATOM 23 C4 A B 16 -12.641 5.488 -12.563 1.00 66.74 C
ATOM 24 P U B 17 -11.047 11.200 -16.037 1.00 84.22 P
ATOM 25 OP1 U B 17 -10.110 11.444 -14.909 1.00 84.13 O
ATOM 26 OP2 U B 17 -11.347 12.306 -16.985 1.00 83.82 O
ATOM 27 O5' U B 17 -10.526 9.950 -16.879 1.00 85.22 O
TER
ATOM 2 P U A 13 -23.207 2.119 -11.532 1.00 60.08 P
ATOM 3 OP1 U A 13 -23.977 1.423 -10.463 1.00 59.77 O
ATOM 4 OP2 U A 13 -23.903 3.068 -12.449 1.00 56.10 O
ATOM 5 O5' U A 13 -21.982 2.873 -10.847 1.00 56.38 O
ATOM 6 C5' U A 13 -21.201 2.219 -9.854 1.00 54.21 C
ATOM 7 C4' U A 13 -20.152 3.157 -9.314 1.00 52.97 C
ATOM 8 O4' U A 13 -19.190 3.470 -10.357 1.00 51.70 O
ATOM 9 C3' U A 13 -20.651 4.523 -8.879 1.00 52.79 C
ATOM 10 O3' U A 13 -21.239 4.491 -7.585 1.00 52.40 O
ATOM 11 C2' U A 13 -19.365 5.331 -8.897 1.00 52.15 C
ATOM 12 O2' U A 13 -18.569 5.051 -7.764 1.00 53.23 O
ATOM 13 C1' U A 13 -18.689 4.784 -10.159 1.00 51.28 C
ATOM 14 N1 U A 13 -19.012 5.597 -11.342 1.00 49.18 N
ATOM 15 C2 U A 13 -18.184 6.670 -11.626 1.00 48.63 C
ATOM 16 O2 U A 13 -17.175 6.917 -10.988 1.00 50.28 O
ATOM 17 N3 U A 13 -18.578 7.439 -12.691 1.00 47.57 N
ATOM 18 C4 U A 13 -19.684 7.245 -13.491 1.00 46.76 C
ATOM 19 O4 U A 13 -19.963 8.087 -14.342 1.00 47.13 O
ATOM 20 C5 U A 13 -20.467 6.091 -13.162 1.00 45.45 C
ATOM 21 C6 U A 13 -20.111 5.325 -12.124 1.00 48.31 C
ATOM 22 P C A 14 -22.608 5.289 -7.323 1.00 50.53 P
ATOM 23 OP1 C A 14 -23.366 4.597 -6.249 1.00 52.01 O
ATOM 24 OP2 C A 14 -23.238 5.487 -8.647 1.00 53.17 O
ATOM 25 O5' C A 14 -22.120 6.714 -6.810 1.00 49.36 O
TER
ATOM 1 O3' G B 15 -16.073 11.515 -11.275 1.00 59.43 O
ATOM 2 P A B 16 -15.892 10.806 -12.703 1.00 62.49 P
ATOM 3 OP1 A B 16 -15.623 11.878 -13.697 1.00 60.99 O
ATOM 4 OP2 A B 16 -17.027 9.865 -12.920 1.00 60.58 O
ATOM 5 O5' A B 16 -14.554 9.969 -12.521 1.00 63.35 O
ATOM 6 C5' A B 16 -13.319 10.641 -12.347 1.00 67.92 C
ATOM 7 C4' A B 16 -12.239 9.930 -13.111 1.00 71.45 C
ATOM 8 O4' A B 16 -11.999 8.648 -12.478 1.00 71.23 O
ATOM 9 C3' A B 16 -12.578 9.589 -14.554 1.00 74.32 C
ATOM 10 O3' A B 16 -12.474 10.730 -15.430 1.00 80.56 O
ATOM 11 C2' A B 16 -11.696 8.377 -14.819 1.00 73.36 C
ATOM 12 O2' A B 16 -10.346 8.700 -15.069 1.00 74.61 O
ATOM 13 C1' A B 16 -11.754 7.664 -13.465 1.00 71.36 C
ATOM 14 N9 A B 16 -12.772 6.621 -13.328 1.00 68.77 N
ATOM 15 C8 A B 16 -14.024 6.550 -13.892 1.00 68.70 C
ATOM 16 N7 A B 16 -14.701 5.480 -13.542 1.00 66.36 N
ATOM 17 C5 A B 16 -13.836 4.802 -12.695 1.00 66.18 C
ATOM 18 C6 A B 16 -13.960 3.594 -11.988 1.00 66.84 C
ATOM 19 N6 A B 16 -15.055 2.832 -12.011 1.00 66.83 N
ATOM 20 N1 A B 16 -12.906 3.192 -11.242 1.00 66.71 N
ATOM 21 C2 A B 16 -11.809 3.965 -11.212 1.00 66.88 C
ATOM 22 N3 A B 16 -11.576 5.123 -11.828 1.00 65.42 N
ATOM 23 C4 A B 16 -12.641 5.488 -12.563 1.00 66.74 C
ATOM 24 P U B 17 -11.047 11.200 -16.037 1.00 84.22 P
ATOM 25 OP1 U B 17 -10.110 11.444 -14.909 1.00 84.13 O
ATOM 26 OP2 U B 17 -11.347 12.306 -16.985 1.00 83.82 O
ATOM 27 O5' U B 17 -10.526 9.950 -16.879 1.00 85.22 O
TER
Atoms:
C4: (-19.684,7.245,-13.491)
N3: (-18.578,7.439,-12.691)
OP1: (-23.977,1.423,-10.463)
OP2: (-23.903,3.068,-12.449)
C2: (-18.184,6.670,-11.626)
C1': (-18.689,4.784,-10.159)
C3': (-20.651,4.523,-8.879)
O5': (-21.982,2.873,-10.847)
O4': (-19.190,3.470,-10.357)
C5': (-21.201,2.219,-9.854)
P: (-23.207,2.119,-11.532)
C4': (-20.152,3.157,-9.314)
C2': (-19.365,5.331,-8.897)
O2': (-18.569,5.051,-7.764)
N1: (-19.012,5.597,-11.342)
O4: (-19.963,8.087,-14.342)
O2: (-17.175,6.917,-10.988)
C6: (-20.111,5.325,-12.124)
C5: (-20.467,6.091,-13.162)
O3': (-21.239,4.491,-7.585)
N3: (-18.578,7.439,-12.691)
OP1: (-23.977,1.423,-10.463)
OP2: (-23.903,3.068,-12.449)
C2: (-18.184,6.670,-11.626)
C1': (-18.689,4.784,-10.159)
C3': (-20.651,4.523,-8.879)
O5': (-21.982,2.873,-10.847)
O4': (-19.190,3.470,-10.357)
C5': (-21.201,2.219,-9.854)
P: (-23.207,2.119,-11.532)
C4': (-20.152,3.157,-9.314)
C2': (-19.365,5.331,-8.897)
O2': (-18.569,5.051,-7.764)
N1: (-19.012,5.597,-11.342)
O4: (-19.963,8.087,-14.342)
O2: (-17.175,6.917,-10.988)
C6: (-20.111,5.325,-12.124)
C5: (-20.467,6.091,-13.162)
O3': (-21.239,4.491,-7.585)
OP1: (-15.623,11.878,-13.697)
OP2: (-17.027,9.865,-12.920)
C3': (-12.578,9.589,-14.554)
C1': (-11.754,7.664,-13.465)
C5': (-13.319,10.641,-12.347)
O4': (-11.999,8.648,-12.478)
C8: (-14.024,6.550,-13.892)
O2': (-10.346,8.700,-15.069)
C6: (-13.960,3.594,-11.988)
C5: (-13.836,4.802,-12.695)
C4: (-12.641,5.488,-12.563)
P: (-15.892,10.806,-12.703)
C4': (-12.239,9.930,-13.111)
C2': (-11.696,8.377,-14.819)
C2: (-11.809,3.965,-11.212)
N1: (-12.906,3.192,-11.242)
N3: (-11.576,5.123,-11.828)
N6: (-15.055,2.832,-12.011)
N7: (-14.701,5.480,-13.542)
N9: (-12.772,6.621,-13.328)
O5': (-14.554,9.969,-12.521)
O3': (-12.474,10.730,-15.430)
OP2: (-17.027,9.865,-12.920)
C3': (-12.578,9.589,-14.554)
C1': (-11.754,7.664,-13.465)
C5': (-13.319,10.641,-12.347)
O4': (-11.999,8.648,-12.478)
C8: (-14.024,6.550,-13.892)
O2': (-10.346,8.700,-15.069)
C6: (-13.960,3.594,-11.988)
C5: (-13.836,4.802,-12.695)
C4: (-12.641,5.488,-12.563)
P: (-15.892,10.806,-12.703)
C4': (-12.239,9.930,-13.111)
C2': (-11.696,8.377,-14.819)
C2: (-11.809,3.965,-11.212)
N1: (-12.906,3.192,-11.242)
N3: (-11.576,5.123,-11.828)
N6: (-15.055,2.832,-12.011)
N7: (-14.701,5.480,-13.542)
N9: (-12.772,6.621,-13.328)
O5': (-14.554,9.969,-12.521)
O3': (-12.474,10.730,-15.430)
Image (generated by PyMOL):