Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11249:12174
Extra
PDB:
ATOM 1 O3' A A1248 29.358 15.866 39.084 1.00 35.83 O
ATOM 2 P U A1249 30.276 15.858 40.396 1.00 36.74 P
ATOM 3 OP1 U A1249 31.102 14.625 40.360 1.00 36.50 O
ATOM 4 OP2 U A1249 29.380 16.087 41.563 1.00 36.67 O
ATOM 5 O5' U A1249 31.219 17.106 40.182 1.00 36.89 O
ATOM 6 C5' U A1249 30.708 18.422 40.155 1.00 37.15 C
ATOM 7 C4' U A1249 31.814 19.432 40.071 1.00 37.24 C
ATOM 8 O4' U A1249 32.673 19.261 41.208 1.00 36.97 O
ATOM 9 C3' U A1249 32.714 19.309 38.853 1.00 37.35 C
ATOM 10 O3' U A1249 33.237 20.573 38.545 1.00 37.58 O
ATOM 11 C2' U A1249 33.844 18.455 39.379 1.00 37.04 C
ATOM 12 O2' U A1249 35.056 18.531 38.643 1.00 37.09 O
ATOM 13 C1' U A1249 33.992 19.031 40.759 1.00 36.91 C
ATOM 14 N1 U A1249 34.642 18.145 41.693 1.00 36.58 N
ATOM 15 C2 U A1249 35.984 18.221 41.996 1.00 36.46 C
ATOM 16 O2 U A1249 36.855 18.968 41.559 1.00 36.60 O
ATOM 17 N3 U A1249 36.369 17.301 42.887 1.00 36.17 N
ATOM 18 C4 U A1249 35.599 16.389 43.492 1.00 35.99 C
ATOM 19 O4 U A1249 36.169 15.694 44.268 1.00 35.75 O
ATOM 20 C5 U A1249 34.246 16.362 43.161 1.00 36.11 C
ATOM 21 C6 U A1249 33.814 17.248 42.275 1.00 36.40 C
ATOM 22 P G A1250 32.863 21.283 37.171 1.00 38.55 P
ATOM 23 OP1 G A1250 33.105 22.731 37.366 1.00 38.77 O
ATOM 24 OP2 G A1250 31.491 20.811 36.805 1.00 38.64 O
ATOM 25 O5' G A1250 33.916 20.710 36.140 1.00 38.55 O
TER
ATOM 1 O3' C B2173 41.475 18.798 43.569 1.00 34.39 O
ATOM 2 P A B2174 40.738 17.386 43.417 1.00 35.94 P
ATOM 3 OP1 A B2174 39.289 17.633 43.668 1.00 36.00 O
ATOM 4 OP2 A B2174 41.421 16.451 44.270 1.00 35.66 O
ATOM 5 O5' A B2174 40.950 17.044 41.877 1.00 36.09 O
ATOM 6 C5' A B2174 40.138 17.705 40.906 1.00 36.36 C
ATOM 7 C4' A B2174 40.308 17.176 39.506 1.00 36.48 C
ATOM 8 O4' A B2174 41.567 17.627 38.963 1.00 36.59 O
ATOM 9 C3' A B2174 40.339 15.674 39.344 1.00 36.28 C
ATOM 10 O3' A B2174 39.044 15.106 39.316 1.00 36.26 O
ATOM 11 C2' A B2174 41.108 15.514 38.036 1.00 36.44 C
ATOM 12 O2' A B2174 40.285 15.816 36.926 1.00 36.71 O
ATOM 13 C1' A B2174 42.139 16.620 38.160 1.00 36.55 C
ATOM 14 N9 A B2174 43.379 16.153 38.819 1.00 36.34 N
ATOM 15 C8 A B2174 43.636 16.359 40.139 1.00 36.16 C
ATOM 16 N7 A B2174 44.760 15.901 40.522 1.00 36.01 N
ATOM 17 C5 A B2174 45.300 15.315 39.396 1.00 36.09 C
ATOM 18 C6 A B2174 46.523 14.633 39.232 1.00 36.00 C
ATOM 19 N6 A B2174 47.362 14.447 40.245 1.00 35.82 N
ATOM 20 N1 A B2174 46.834 14.169 37.999 1.00 36.13 N
ATOM 21 C2 A B2174 45.898 14.376 37.035 1.00 36.33 C
ATOM 22 N3 A B2174 44.706 14.985 37.079 1.00 36.43 N
ATOM 23 C4 A B2174 44.465 15.453 38.321 1.00 36.29 C
ATOM 24 P A B2175 38.714 13.704 40.048 1.00 34.62 P
ATOM 25 OP1 A B2175 37.250 13.698 40.295 1.00 34.65 O
ATOM 26 OP2 A B2175 39.634 13.555 41.197 1.00 34.39 O
ATOM 27 O5' A B2175 39.072 12.615 38.969 1.00 34.64 O
TER
ATOM 2 P U A1249 30.276 15.858 40.396 1.00 36.74 P
ATOM 3 OP1 U A1249 31.102 14.625 40.360 1.00 36.50 O
ATOM 4 OP2 U A1249 29.380 16.087 41.563 1.00 36.67 O
ATOM 5 O5' U A1249 31.219 17.106 40.182 1.00 36.89 O
ATOM 6 C5' U A1249 30.708 18.422 40.155 1.00 37.15 C
ATOM 7 C4' U A1249 31.814 19.432 40.071 1.00 37.24 C
ATOM 8 O4' U A1249 32.673 19.261 41.208 1.00 36.97 O
ATOM 9 C3' U A1249 32.714 19.309 38.853 1.00 37.35 C
ATOM 10 O3' U A1249 33.237 20.573 38.545 1.00 37.58 O
ATOM 11 C2' U A1249 33.844 18.455 39.379 1.00 37.04 C
ATOM 12 O2' U A1249 35.056 18.531 38.643 1.00 37.09 O
ATOM 13 C1' U A1249 33.992 19.031 40.759 1.00 36.91 C
ATOM 14 N1 U A1249 34.642 18.145 41.693 1.00 36.58 N
ATOM 15 C2 U A1249 35.984 18.221 41.996 1.00 36.46 C
ATOM 16 O2 U A1249 36.855 18.968 41.559 1.00 36.60 O
ATOM 17 N3 U A1249 36.369 17.301 42.887 1.00 36.17 N
ATOM 18 C4 U A1249 35.599 16.389 43.492 1.00 35.99 C
ATOM 19 O4 U A1249 36.169 15.694 44.268 1.00 35.75 O
ATOM 20 C5 U A1249 34.246 16.362 43.161 1.00 36.11 C
ATOM 21 C6 U A1249 33.814 17.248 42.275 1.00 36.40 C
ATOM 22 P G A1250 32.863 21.283 37.171 1.00 38.55 P
ATOM 23 OP1 G A1250 33.105 22.731 37.366 1.00 38.77 O
ATOM 24 OP2 G A1250 31.491 20.811 36.805 1.00 38.64 O
ATOM 25 O5' G A1250 33.916 20.710 36.140 1.00 38.55 O
TER
ATOM 1 O3' C B2173 41.475 18.798 43.569 1.00 34.39 O
ATOM 2 P A B2174 40.738 17.386 43.417 1.00 35.94 P
ATOM 3 OP1 A B2174 39.289 17.633 43.668 1.00 36.00 O
ATOM 4 OP2 A B2174 41.421 16.451 44.270 1.00 35.66 O
ATOM 5 O5' A B2174 40.950 17.044 41.877 1.00 36.09 O
ATOM 6 C5' A B2174 40.138 17.705 40.906 1.00 36.36 C
ATOM 7 C4' A B2174 40.308 17.176 39.506 1.00 36.48 C
ATOM 8 O4' A B2174 41.567 17.627 38.963 1.00 36.59 O
ATOM 9 C3' A B2174 40.339 15.674 39.344 1.00 36.28 C
ATOM 10 O3' A B2174 39.044 15.106 39.316 1.00 36.26 O
ATOM 11 C2' A B2174 41.108 15.514 38.036 1.00 36.44 C
ATOM 12 O2' A B2174 40.285 15.816 36.926 1.00 36.71 O
ATOM 13 C1' A B2174 42.139 16.620 38.160 1.00 36.55 C
ATOM 14 N9 A B2174 43.379 16.153 38.819 1.00 36.34 N
ATOM 15 C8 A B2174 43.636 16.359 40.139 1.00 36.16 C
ATOM 16 N7 A B2174 44.760 15.901 40.522 1.00 36.01 N
ATOM 17 C5 A B2174 45.300 15.315 39.396 1.00 36.09 C
ATOM 18 C6 A B2174 46.523 14.633 39.232 1.00 36.00 C
ATOM 19 N6 A B2174 47.362 14.447 40.245 1.00 35.82 N
ATOM 20 N1 A B2174 46.834 14.169 37.999 1.00 36.13 N
ATOM 21 C2 A B2174 45.898 14.376 37.035 1.00 36.33 C
ATOM 22 N3 A B2174 44.706 14.985 37.079 1.00 36.43 N
ATOM 23 C4 A B2174 44.465 15.453 38.321 1.00 36.29 C
ATOM 24 P A B2175 38.714 13.704 40.048 1.00 34.62 P
ATOM 25 OP1 A B2175 37.250 13.698 40.295 1.00 34.65 O
ATOM 26 OP2 A B2175 39.634 13.555 41.197 1.00 34.39 O
ATOM 27 O5' A B2175 39.072 12.615 38.969 1.00 34.64 O
TER
Atoms:
C4: (35.599,16.389,43.492)
N3: (36.369,17.301,42.887)
OP1: (31.102,14.625,40.360)
OP2: (29.380,16.087,41.563)
C2: (35.984,18.221,41.996)
C1': (33.992,19.031,40.759)
C3': (32.714,19.309,38.853)
O5': (31.219,17.106,40.182)
O4': (32.673,19.261,41.208)
C5': (30.708,18.422,40.155)
P: (30.276,15.858,40.396)
C4': (31.814,19.432,40.071)
C2': (33.844,18.455,39.379)
O2': (35.056,18.531,38.643)
N1: (34.642,18.145,41.693)
O4: (36.169,15.694,44.268)
O2: (36.855,18.968,41.559)
C6: (33.814,17.248,42.275)
C5: (34.246,16.362,43.161)
O3': (33.237,20.573,38.545)
N3: (36.369,17.301,42.887)
OP1: (31.102,14.625,40.360)
OP2: (29.380,16.087,41.563)
C2: (35.984,18.221,41.996)
C1': (33.992,19.031,40.759)
C3': (32.714,19.309,38.853)
O5': (31.219,17.106,40.182)
O4': (32.673,19.261,41.208)
C5': (30.708,18.422,40.155)
P: (30.276,15.858,40.396)
C4': (31.814,19.432,40.071)
C2': (33.844,18.455,39.379)
O2': (35.056,18.531,38.643)
N1: (34.642,18.145,41.693)
O4: (36.169,15.694,44.268)
O2: (36.855,18.968,41.559)
C6: (33.814,17.248,42.275)
C5: (34.246,16.362,43.161)
O3': (33.237,20.573,38.545)
OP1: (39.289,17.633,43.668)
OP2: (41.421,16.451,44.270)
C3': (40.339,15.674,39.344)
C1': (42.139,16.620,38.160)
C5': (40.138,17.705,40.906)
O4': (41.567,17.627,38.963)
C8: (43.636,16.359,40.139)
O2': (40.285,15.816,36.926)
C6: (46.523,14.633,39.232)
C5: (45.300,15.315,39.396)
C4: (44.465,15.453,38.321)
P: (40.738,17.386,43.417)
C4': (40.308,17.176,39.506)
C2': (41.108,15.514,38.036)
C2: (45.898,14.376,37.035)
N1: (46.834,14.169,37.999)
N3: (44.706,14.985,37.079)
N6: (47.362,14.447,40.245)
N7: (44.760,15.901,40.522)
N9: (43.379,16.153,38.819)
O5': (40.950,17.044,41.877)
O3': (39.044,15.106,39.316)
OP2: (41.421,16.451,44.270)
C3': (40.339,15.674,39.344)
C1': (42.139,16.620,38.160)
C5': (40.138,17.705,40.906)
O4': (41.567,17.627,38.963)
C8: (43.636,16.359,40.139)
O2': (40.285,15.816,36.926)
C6: (46.523,14.633,39.232)
C5: (45.300,15.315,39.396)
C4: (44.465,15.453,38.321)
P: (40.738,17.386,43.417)
C4': (40.308,17.176,39.506)
C2': (41.108,15.514,38.036)
C2: (45.898,14.376,37.035)
N1: (46.834,14.169,37.999)
N3: (44.706,14.985,37.079)
N6: (47.362,14.447,40.245)
N7: (44.760,15.901,40.522)
N9: (43.379,16.153,38.819)
O5': (40.950,17.044,41.877)
O3': (39.044,15.106,39.316)
Image (generated by PyMOL):