ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:02117:02065

Extra

PDB:
ATOM 1 O3' G A2116 98.691 108.592 67.621 1.00 58.25 O
ATOM 2 P G A2117 97.911 107.821 68.788 1.00 60.42 P
ATOM 3 OP1 G A2117 98.803 107.864 69.990 1.00 57.60 O
ATOM 4 OP2 G A2117 97.453 106.506 68.252 1.00 60.59 O
ATOM 5 O5' G A2117 96.611 108.713 69.035 1.00 56.19 O
ATOM 6 C5' G A2117 96.534 109.599 70.161 1.00 49.21 C
ATOM 7 C4' G A2117 95.750 110.832 69.804 1.00 42.97 C
ATOM 8 O4' G A2117 94.450 110.432 69.309 1.00 40.14 O
ATOM 9 C3' G A2117 95.489 111.768 70.976 1.00 40.53 C
ATOM 10 O3' G A2117 95.416 113.099 70.498 1.00 39.34 O
ATOM 11 C2' G A2117 94.131 111.297 71.472 1.00 39.50 C
ATOM 12 O2' G A2117 93.402 112.280 72.166 1.00 38.62 O
ATOM 13 C1' G A2117 93.443 110.936 70.161 1.00 40.83 C
ATOM 14 N9 G A2117 92.433 109.897 70.317 1.00 42.66 N
ATOM 15 C8 G A2117 91.167 109.902 69.789 1.00 43.34 C
ATOM 16 N7 G A2117 90.487 108.829 70.082 1.00 43.23 N
ATOM 17 C5 G A2117 91.355 108.070 70.853 1.00 43.55 C
ATOM 18 C6 G A2117 91.169 106.811 71.466 1.00 43.33 C
ATOM 19 O6 G A2117 90.168 106.095 71.453 1.00 44.72 O
ATOM 20 N1 G A2117 92.301 106.406 72.160 1.00 42.41 N
ATOM 21 C2 G A2117 93.459 107.123 72.262 1.00 42.11 C
ATOM 22 N2 G A2117 94.430 106.561 72.991 1.00 42.81 N
ATOM 23 N3 G A2117 93.648 108.302 71.696 1.00 42.41 N
ATOM 24 C4 G A2117 92.560 108.713 71.011 1.00 42.91 C
ATOM 25 P G A2118 96.729 114.020 70.505 1.00 37.84 P
ATOM 26 OP1 G A2118 97.921 113.158 70.385 1.00 38.20 O
ATOM 27 OP2 G A2118 96.611 114.949 71.657 1.00 36.13 O
ATOM 28 O5' G A2118 96.603 114.826 69.143 1.00 32.88 O
TER

ATOM 1 O3' A B2064 90.681 99.007 73.425 1.00 34.97 O
ATOM 2 P C B2065 91.037 98.856 71.875 1.00 36.98 P
ATOM 3 OP1 C B2065 91.601 97.502 71.657 1.00 38.31 O
ATOM 4 OP2 C B2065 91.807 100.047 71.449 1.00 37.55 O
ATOM 5 O5' C B2065 89.620 98.936 71.169 1.00 35.92 O
ATOM 6 C5' C B2065 88.724 97.827 71.205 1.00 34.28 C
ATOM 7 C4' C B2065 87.643 98.030 70.195 1.00 32.63 C
ATOM 8 O4' C B2065 86.816 99.136 70.607 1.00 31.96 O
ATOM 9 C3' C B2065 88.147 98.440 68.828 1.00 33.00 C
ATOM 10 O3' C B2065 88.520 97.303 68.083 1.00 36.18 O
ATOM 11 C2' C B2065 86.930 99.121 68.241 1.00 33.92 C
ATOM 12 O2' C B2065 85.980 98.173 67.809 1.00 34.10 O
ATOM 13 C1' C B2065 86.391 99.856 69.468 1.00 33.38 C
ATOM 14 N1 C B2065 86.897 101.231 69.576 1.00 33.33 N
ATOM 15 C2 C B2065 86.305 102.225 68.804 1.00 33.81 C
ATOM 16 O2 C B2065 85.375 101.923 68.043 1.00 32.81 O
ATOM 17 N3 C B2065 86.761 103.489 68.898 1.00 34.74 N
ATOM 18 C4 C B2065 87.771 103.775 69.714 1.00 33.69 C
ATOM 19 N4 C B2065 88.190 105.035 69.764 1.00 34.63 N
ATOM 20 C5 C B2065 88.395 102.783 70.512 1.00 33.77 C
ATOM 21 C6 C B2065 87.931 101.536 70.416 1.00 34.46 C
ATOM 22 P U B2066 89.573 97.447 66.888 1.00 38.55 P
ATOM 23 OP1 U B2066 89.667 96.106 66.259 1.00 37.62 O
ATOM 24 OP2 U B2066 90.801 98.122 67.378 1.00 38.96 O
ATOM 25 O5' U B2066 88.848 98.414 65.863 1.00 37.31 O
TER

Atoms:
OP1: (98.803,107.864,69.990)
OP2: (97.453,106.506,68.252)
C3': (95.489,111.768,70.976)
C1': (93.443,110.936,70.161)
C5': (96.534,109.599,70.161)
O6: (90.168,106.095,71.453)
O4': (94.450,110.432,69.309)
C8: (91.167,109.902,69.789)
C2: (93.459,107.123,72.262)
C6: (91.169,106.811,71.466)
C5: (91.355,108.070,70.853)
C4: (92.560,108.713,71.011)
P: (97.911,107.821,68.788)
C4': (95.750,110.832,69.804)
C2': (94.131,111.297,71.472)
O2': (93.402,112.280,72.166)
N1: (92.301,106.406,72.160)
N2: (94.430,106.561,72.991)
N3: (93.648,108.302,71.696)
N7: (90.487,108.829,70.082)
N9: (92.433,109.897,70.317)
O5': (96.611,108.713,69.035)
O3': (95.416,113.099,70.498)
C2: (86.305,102.225,68.804)
OP1: (91.601,97.502,71.657)
OP2: (91.807,100.047,71.449)
C4: (87.771,103.775,69.714)
O5': (89.620,98.936,71.169)
C3': (88.147,98.440,68.828)
C1': (86.391,99.856,69.468)
O4': (86.816,99.136,70.607)
C5': (88.724,97.827,71.205)
P: (91.037,98.856,71.875)
O2: (85.375,101.923,68.043)
C4': (87.643,98.030,70.195)
C2': (86.930,99.121,68.241)
O2': (85.980,98.173,67.809)
N1: (86.897,101.231,69.576)
N3: (86.761,103.489,68.898)
N4: (88.190,105.035,69.764)
C6: (87.931,101.536,70.416)
C5: (88.395,102.783,70.512)
O3': (88.520,97.303,68.083)
Image (generated by PyMOL):
PyMOL image
show in jmol