ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ8:979:9101

Extra

PDB:
ATOM 1 O3' U A 78 43.729 67.837 124.210 1.00 54.62 O
ATOM 2 P A A 79 43.919 69.038 123.164 1.00 54.22 P
ATOM 3 OP1 A A 79 44.325 70.248 123.926 1.00 54.70 O
ATOM 4 OP2 A A 79 42.711 69.083 122.300 1.00 55.41 O
ATOM 5 O5' A A 79 45.140 68.553 122.267 1.00 53.43 O
ATOM 6 C5' A A 79 46.445 68.360 122.839 1.00 50.46 C
ATOM 7 C4' A A 79 47.414 67.888 121.783 1.00 48.64 C
ATOM 8 O4' A A 79 47.112 66.520 121.396 1.00 48.28 O
ATOM 9 C3' A A 79 47.384 68.644 120.465 1.00 47.33 C
ATOM 10 O3' A A 79 48.083 69.879 120.555 1.00 45.77 O
ATOM 11 C2' A A 79 48.055 67.649 119.523 1.00 47.30 C
ATOM 12 O2' A A 79 49.464 67.626 119.632 1.00 47.57 O
ATOM 13 C1' A A 79 47.502 66.319 120.045 1.00 46.93 C
ATOM 14 N9 A A 79 46.346 65.846 119.283 1.00 46.27 N
ATOM 15 C8 A A 79 45.021 65.831 119.650 1.00 46.01 C
ATOM 16 N7 A A 79 44.223 65.347 118.727 1.00 46.31 N
ATOM 17 C5 A A 79 45.082 65.022 117.682 1.00 45.74 C
ATOM 18 C6 A A 79 44.859 64.466 116.406 1.00 45.54 C
ATOM 19 N6 A A 79 43.651 64.131 115.939 1.00 45.83 N
ATOM 20 N1 A A 79 45.935 64.263 115.614 1.00 45.67 N
ATOM 21 C2 A A 79 47.143 64.603 116.076 1.00 44.77 C
ATOM 22 N3 A A 79 47.478 65.134 117.247 1.00 45.13 N
ATOM 23 C4 A A 79 46.389 65.320 118.013 1.00 45.14 C
ATOM 24 P C A 80 47.435 71.215 119.928 1.00 46.35 P
ATOM 25 OP1 C A 80 48.430 72.307 120.131 1.00 46.36 O
ATOM 26 OP2 C A 80 46.056 71.379 120.459 1.00 46.34 O
ATOM 27 O5' C A 80 47.353 70.896 118.366 1.00 45.39 O
TER

ATOM 1 O3' G B 100 37.005 61.775 110.195 1.00 45.36 O
ATOM 2 P G B 101 37.265 60.511 111.147 1.00 45.48 P
ATOM 3 OP1 G B 101 37.574 59.327 110.304 1.00 45.12 O
ATOM 4 OP2 G B 101 36.147 60.455 112.111 1.00 47.93 O
ATOM 5 O5' G B 101 38.577 60.917 111.949 1.00 45.44 O
ATOM 6 C5' G B 101 39.830 61.089 111.267 1.00 43.97 C
ATOM 7 C4' G B 101 40.879 61.569 112.231 1.00 43.66 C
ATOM 8 O4' G B 101 40.582 62.926 112.665 1.00 43.64 O
ATOM 9 C3' G B 101 40.964 60.797 113.534 1.00 44.36 C
ATOM 10 O3' G B 101 41.674 59.577 113.389 1.00 46.46 O
ATOM 11 C2' G B 101 41.684 61.791 114.427 1.00 43.99 C
ATOM 12 O2' G B 101 43.057 61.862 114.095 1.00 42.34 O
ATOM 13 C1' G B 101 40.991 63.094 114.018 1.00 43.27 C
ATOM 14 N9 G B 101 39.795 63.341 114.817 1.00 43.44 N
ATOM 15 C8 G B 101 38.494 63.108 114.438 1.00 43.08 C
ATOM 16 N7 G B 101 37.627 63.432 115.355 1.00 42.87 N
ATOM 17 C5 G B 101 38.398 63.906 116.406 1.00 42.49 C
ATOM 18 C6 G B 101 38.007 64.407 117.667 1.00 43.33 C
ATOM 19 O6 G B 101 36.858 64.552 118.117 1.00 42.57 O
ATOM 20 N1 G B 101 39.108 64.773 118.435 1.00 43.13 N
ATOM 21 C2 G B 101 40.416 64.681 118.032 1.00 43.29 C
ATOM 22 N2 G B 101 41.336 65.094 118.918 1.00 44.50 N
ATOM 23 N3 G B 101 40.795 64.220 116.850 1.00 43.45 N
ATOM 24 C4 G B 101 39.739 63.852 116.093 1.00 42.82 C
ATOM 25 P A B 102 41.576 58.464 114.542 1.00 43.89 P
ATOM 26 OP1 A B 102 42.150 57.212 113.974 1.00 42.24 O
ATOM 27 OP2 A B 102 40.189 58.465 115.069 1.00 43.88 O
ATOM 28 O5' A B 102 42.536 59.041 115.674 1.00 43.65 O
TER

Atoms:
OP1: (44.325,70.248,123.926)
OP2: (42.711,69.083,122.300)
C3': (47.384,68.644,120.465)
C1': (47.502,66.319,120.045)
C5': (46.445,68.360,122.839)
O4': (47.112,66.520,121.396)
C8: (45.021,65.831,119.650)
O2': (49.464,67.626,119.632)
C6: (44.859,64.466,116.406)
C5: (45.082,65.022,117.682)
C4: (46.389,65.320,118.013)
P: (43.919,69.038,123.164)
C4': (47.414,67.888,121.783)
C2': (48.055,67.649,119.523)
C2: (47.143,64.603,116.076)
N1: (45.935,64.263,115.614)
N3: (47.478,65.134,117.247)
N6: (43.651,64.131,115.939)
N7: (44.223,65.347,118.727)
N9: (46.346,65.846,119.283)
O5': (45.140,68.553,122.267)
O3': (48.083,69.879,120.555)
OP1: (37.574,59.327,110.304)
OP2: (36.147,60.455,112.111)
C3': (40.964,60.797,113.534)
C1': (40.991,63.094,114.018)
C5': (39.830,61.089,111.267)
O6: (36.858,64.552,118.117)
O4': (40.582,62.926,112.665)
C8: (38.494,63.108,114.438)
C2: (40.416,64.681,118.032)
C6: (38.007,64.407,117.667)
C5: (38.398,63.906,116.406)
C4: (39.739,63.852,116.093)
P: (37.265,60.511,111.147)
C4': (40.879,61.569,112.231)
C2': (41.684,61.791,114.427)
O2': (43.057,61.862,114.095)
N1: (39.108,64.773,118.435)
N2: (41.336,65.094,118.918)
N3: (40.795,64.220,116.850)
N7: (37.627,63.432,115.355)
N9: (39.795,63.341,114.817)
O5': (38.577,60.917,111.949)
O3': (41.674,59.577,113.389)
Image (generated by PyMOL):
PyMOL image
show in jmol