ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:0988:01233

Extra

PDB:
ATOM 1 O3' U A 987 19.303 72.561 71.426 1.00 58.50 O
ATOM 2 P U A 988 17.784 73.044 71.241 1.00 61.74 P
ATOM 3 OP1 U A 988 17.236 73.512 72.545 1.00 60.60 O
ATOM 4 OP2 U A 988 17.087 71.978 70.492 1.00 64.29 O
ATOM 5 O5' U A 988 17.900 74.301 70.275 1.00 60.43 O
ATOM 6 C5' U A 988 18.272 75.571 70.806 1.00 59.47 C
ATOM 7 C4' U A 988 17.731 76.685 69.948 1.00 58.48 C
ATOM 8 O4' U A 988 16.435 76.331 69.390 1.00 58.74 O
ATOM 9 C3' U A 988 17.516 77.965 70.742 1.00 58.03 C
ATOM 10 O3' U A 988 17.751 79.095 69.919 1.00 54.78 O
ATOM 11 C2' U A 988 16.041 77.863 71.109 1.00 59.30 C
ATOM 12 O2' U A 988 15.457 79.101 71.454 1.00 60.41 O
ATOM 13 C1' U A 988 15.462 77.263 69.826 1.00 60.09 C
ATOM 14 N1 U A 988 14.178 76.565 70.009 1.00 62.07 N
ATOM 15 C2 U A 988 13.007 77.288 69.797 1.00 63.12 C
ATOM 16 O2 U A 988 12.991 78.453 69.429 1.00 62.71 O
ATOM 17 N3 U A 988 11.849 76.590 70.027 1.00 65.10 N
ATOM 18 C4 U A 988 11.733 75.273 70.425 1.00 65.72 C
ATOM 19 O4 U A 988 10.612 74.807 70.646 1.00 67.38 O
ATOM 20 C5 U A 988 12.980 74.587 70.598 1.00 64.19 C
ATOM 21 C6 U A 988 14.129 75.238 70.392 1.00 62.87 C
ATOM 22 P U A 989 19.234 79.685 69.795 1.00 51.60 P
ATOM 23 OP1 U A 989 19.117 81.056 69.244 1.00 53.44 O
ATOM 24 OP2 U A 989 20.047 78.671 69.077 1.00 50.96 O
ATOM 25 O5' U A 989 19.768 79.762 71.294 1.00 49.62 O
TER

ATOM 1 O3' C B1232 10.326 79.546 71.086 1.00 52.37 O
ATOM 2 P A B1233 9.744 79.683 69.601 1.00 52.84 P
ATOM 3 OP1 A B1233 9.650 78.294 69.087 1.00 53.22 O
ATOM 4 OP2 A B1233 10.540 80.684 68.857 1.00 52.70 O
ATOM 5 O5' A B1233 8.276 80.267 69.822 1.00 49.95 O
ATOM 6 C5' A B1233 7.230 79.438 70.363 1.00 45.39 C
ATOM 7 C4' A B1233 5.903 80.157 70.320 1.00 44.50 C
ATOM 8 O4' A B1233 5.928 81.285 71.228 1.00 44.48 O
ATOM 9 C3' A B1233 5.505 80.790 69.000 1.00 45.24 C
ATOM 10 O3' A B1233 5.011 79.865 68.053 1.00 46.61 O
ATOM 11 C2' A B1233 4.459 81.800 69.442 1.00 45.37 C
ATOM 12 O2' A B1233 3.221 81.210 69.774 1.00 42.99 O
ATOM 13 C1' A B1233 5.104 82.328 70.721 1.00 45.81 C
ATOM 14 N9 A B1233 5.934 83.515 70.480 1.00 47.10 N
ATOM 15 C8 A B1233 7.296 83.588 70.288 1.00 46.53 C
ATOM 16 N7 A B1233 7.739 84.809 70.114 1.00 46.41 N
ATOM 17 C5 A B1233 6.596 85.594 70.193 1.00 45.23 C
ATOM 18 C6 A B1233 6.391 86.978 70.091 1.00 44.31 C
ATOM 19 N6 A B1233 7.367 87.858 69.883 1.00 43.94 N
ATOM 20 N1 A B1233 5.130 87.436 70.209 1.00 45.05 N
ATOM 21 C2 A B1233 4.146 86.557 70.413 1.00 45.52 C
ATOM 22 N3 A B1233 4.210 85.236 70.529 1.00 45.59 N
ATOM 23 C4 A B1233 5.478 84.811 70.409 1.00 45.99 C
ATOM 24 P C B1234 5.384 80.062 66.506 1.00 48.35 P
ATOM 25 OP1 C B1234 4.835 78.913 65.746 1.00 47.95 O
ATOM 26 OP2 C B1234 6.838 80.367 66.430 1.00 49.26 O
ATOM 27 O5' C B1234 4.573 81.366 66.092 1.00 47.30 O
TER

Atoms:
C4: (11.733,75.273,70.425)
N3: (11.849,76.590,70.027)
OP1: (17.236,73.512,72.545)
OP2: (17.087,71.978,70.492)
C2: (13.007,77.288,69.797)
C1': (15.462,77.263,69.826)
C3': (17.516,77.965,70.742)
O5': (17.900,74.301,70.275)
O4': (16.435,76.331,69.390)
C5': (18.272,75.571,70.806)
P: (17.784,73.044,71.241)
C4': (17.731,76.685,69.948)
C2': (16.041,77.863,71.109)
O2': (15.457,79.101,71.454)
N1: (14.178,76.565,70.009)
O4: (10.612,74.807,70.646)
O2: (12.991,78.453,69.429)
C6: (14.129,75.238,70.392)
C5: (12.980,74.587,70.598)
O3': (17.751,79.095,69.919)
OP1: (9.650,78.294,69.087)
OP2: (10.540,80.684,68.857)
C3': (5.505,80.790,69.000)
C1': (5.104,82.328,70.721)
C5': (7.230,79.438,70.363)
O4': (5.928,81.285,71.228)
C8: (7.296,83.588,70.288)
O2': (3.221,81.210,69.774)
C6: (6.391,86.978,70.091)
C5: (6.596,85.594,70.193)
C4: (5.478,84.811,70.409)
P: (9.744,79.683,69.601)
C4': (5.903,80.157,70.320)
C2': (4.459,81.800,69.442)
C2: (4.146,86.557,70.413)
N1: (5.130,87.436,70.209)
N3: (4.210,85.236,70.529)
N6: (7.367,87.858,69.883)
N7: (7.739,84.809,70.114)
N9: (5.934,83.515,70.480)
O5': (8.276,80.267,69.822)
O3': (5.011,79.865,68.053)
Image (generated by PyMOL):
PyMOL image
show in jmol