Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01129:01132
Extra
PDB:
ATOM 1 O3' U A1128 88.885 78.408 179.834 1.00145.81 O
ATOM 2 P U A1129 89.899 78.903 180.980 1.00146.73 P
ATOM 3 OP1 U A1129 91.255 78.996 180.379 1.00146.67 O
ATOM 4 OP2 U A1129 89.686 78.049 182.180 1.00146.62 O
ATOM 5 O5' U A1129 89.388 80.370 181.342 1.00147.40 O
ATOM 6 C5' U A1129 89.351 81.420 180.347 1.00147.97 C
ATOM 7 C4' U A1129 88.543 82.597 180.853 1.00148.59 C
ATOM 8 O4' U A1129 87.178 82.166 181.102 1.00148.04 O
ATOM 9 C3' U A1129 88.993 83.207 182.176 1.00149.31 C
ATOM 10 O3' U A1129 90.046 84.157 181.994 1.00151.04 O
ATOM 11 C2' U A1129 87.714 83.865 182.677 1.00148.54 C
ATOM 12 O2' U A1129 87.466 85.100 182.038 1.00148.15 O
ATOM 13 C1' U A1129 86.660 82.846 182.235 1.00147.80 C
ATOM 14 N1 U A1129 86.326 81.845 183.264 1.00146.96 N
ATOM 15 C2 U A1129 85.178 82.047 184.021 1.00146.50 C
ATOM 16 O2 U A1129 84.443 83.014 183.879 1.00145.91 O
ATOM 17 N3 U A1129 84.924 81.070 184.954 1.00146.23 N
ATOM 18 C4 U A1129 85.679 79.939 185.206 1.00146.16 C
ATOM 19 O4 U A1129 85.300 79.138 186.059 1.00146.16 O
ATOM 20 C5 U A1129 86.847 79.805 184.391 1.00145.87 C
ATOM 21 C6 U A1129 87.124 80.736 183.473 1.00146.36 C
ATOM 22 P A A1130 91.140 84.380 183.155 1.00151.41 P
ATOM 23 OP1 A A1130 92.146 85.349 182.649 1.00151.41 O
ATOM 24 OP2 A A1130 91.586 83.043 183.627 1.00151.52 O
ATOM 25 O5' A A1130 90.335 85.079 184.340 1.00151.69 O
TER
ATOM 1 O3' G B1131 82.070 84.952 187.389 1.00152.43 O
ATOM 2 P A B1132 81.563 83.501 186.906 1.00151.80 P
ATOM 3 OP1 A B1132 80.567 83.030 187.905 1.00151.40 O
ATOM 4 OP2 A B1132 82.740 82.651 186.585 1.00151.21 O
ATOM 5 O5' A B1132 80.792 83.800 185.546 1.00151.69 O
ATOM 6 C5' A B1132 79.562 84.536 185.556 1.00152.69 C
ATOM 7 C4' A B1132 79.049 84.725 184.151 1.00153.73 C
ATOM 8 O4' A B1132 80.014 85.472 183.380 1.00153.85 O
ATOM 9 C3' A B1132 78.881 83.473 183.305 1.00154.46 C
ATOM 10 O3' A B1132 77.669 82.818 183.666 1.00154.32 O
ATOM 11 C2' A B1132 78.810 84.058 181.891 1.00154.77 C
ATOM 12 O2' A B1132 77.520 84.525 181.539 1.00155.94 O
ATOM 13 C1' A B1132 79.738 85.274 182.008 1.00154.13 C
ATOM 14 N9 A B1132 80.999 85.198 181.273 1.00153.31 N
ATOM 15 C8 A B1132 82.031 84.301 181.407 1.00152.99 C
ATOM 16 N7 A B1132 83.028 84.519 180.583 1.00152.89 N
ATOM 17 C5 A B1132 82.626 85.635 179.859 1.00152.73 C
ATOM 18 C6 A B1132 83.239 86.369 178.825 1.00152.39 C
ATOM 19 N6 A B1132 84.436 86.072 178.312 1.00152.23 N
ATOM 20 N1 A B1132 82.569 87.431 178.328 1.00151.98 N
ATOM 21 C2 A B1132 81.367 87.725 178.835 1.00151.81 C
ATOM 22 N3 A B1132 80.686 87.113 179.798 1.00152.16 N
ATOM 23 C4 A B1132 81.380 86.063 180.275 1.00152.87 C
ATOM 24 P A B1133 77.371 81.317 183.168 1.00153.74 P
ATOM 25 OP1 A B1133 78.210 80.392 183.971 1.00153.74 O
ATOM 26 OP2 A B1133 77.432 81.259 181.684 1.00153.47 O
ATOM 27 O5' A B1133 75.855 81.112 183.610 1.00153.42 O
TER
ATOM 2 P U A1129 89.899 78.903 180.980 1.00146.73 P
ATOM 3 OP1 U A1129 91.255 78.996 180.379 1.00146.67 O
ATOM 4 OP2 U A1129 89.686 78.049 182.180 1.00146.62 O
ATOM 5 O5' U A1129 89.388 80.370 181.342 1.00147.40 O
ATOM 6 C5' U A1129 89.351 81.420 180.347 1.00147.97 C
ATOM 7 C4' U A1129 88.543 82.597 180.853 1.00148.59 C
ATOM 8 O4' U A1129 87.178 82.166 181.102 1.00148.04 O
ATOM 9 C3' U A1129 88.993 83.207 182.176 1.00149.31 C
ATOM 10 O3' U A1129 90.046 84.157 181.994 1.00151.04 O
ATOM 11 C2' U A1129 87.714 83.865 182.677 1.00148.54 C
ATOM 12 O2' U A1129 87.466 85.100 182.038 1.00148.15 O
ATOM 13 C1' U A1129 86.660 82.846 182.235 1.00147.80 C
ATOM 14 N1 U A1129 86.326 81.845 183.264 1.00146.96 N
ATOM 15 C2 U A1129 85.178 82.047 184.021 1.00146.50 C
ATOM 16 O2 U A1129 84.443 83.014 183.879 1.00145.91 O
ATOM 17 N3 U A1129 84.924 81.070 184.954 1.00146.23 N
ATOM 18 C4 U A1129 85.679 79.939 185.206 1.00146.16 C
ATOM 19 O4 U A1129 85.300 79.138 186.059 1.00146.16 O
ATOM 20 C5 U A1129 86.847 79.805 184.391 1.00145.87 C
ATOM 21 C6 U A1129 87.124 80.736 183.473 1.00146.36 C
ATOM 22 P A A1130 91.140 84.380 183.155 1.00151.41 P
ATOM 23 OP1 A A1130 92.146 85.349 182.649 1.00151.41 O
ATOM 24 OP2 A A1130 91.586 83.043 183.627 1.00151.52 O
ATOM 25 O5' A A1130 90.335 85.079 184.340 1.00151.69 O
TER
ATOM 1 O3' G B1131 82.070 84.952 187.389 1.00152.43 O
ATOM 2 P A B1132 81.563 83.501 186.906 1.00151.80 P
ATOM 3 OP1 A B1132 80.567 83.030 187.905 1.00151.40 O
ATOM 4 OP2 A B1132 82.740 82.651 186.585 1.00151.21 O
ATOM 5 O5' A B1132 80.792 83.800 185.546 1.00151.69 O
ATOM 6 C5' A B1132 79.562 84.536 185.556 1.00152.69 C
ATOM 7 C4' A B1132 79.049 84.725 184.151 1.00153.73 C
ATOM 8 O4' A B1132 80.014 85.472 183.380 1.00153.85 O
ATOM 9 C3' A B1132 78.881 83.473 183.305 1.00154.46 C
ATOM 10 O3' A B1132 77.669 82.818 183.666 1.00154.32 O
ATOM 11 C2' A B1132 78.810 84.058 181.891 1.00154.77 C
ATOM 12 O2' A B1132 77.520 84.525 181.539 1.00155.94 O
ATOM 13 C1' A B1132 79.738 85.274 182.008 1.00154.13 C
ATOM 14 N9 A B1132 80.999 85.198 181.273 1.00153.31 N
ATOM 15 C8 A B1132 82.031 84.301 181.407 1.00152.99 C
ATOM 16 N7 A B1132 83.028 84.519 180.583 1.00152.89 N
ATOM 17 C5 A B1132 82.626 85.635 179.859 1.00152.73 C
ATOM 18 C6 A B1132 83.239 86.369 178.825 1.00152.39 C
ATOM 19 N6 A B1132 84.436 86.072 178.312 1.00152.23 N
ATOM 20 N1 A B1132 82.569 87.431 178.328 1.00151.98 N
ATOM 21 C2 A B1132 81.367 87.725 178.835 1.00151.81 C
ATOM 22 N3 A B1132 80.686 87.113 179.798 1.00152.16 N
ATOM 23 C4 A B1132 81.380 86.063 180.275 1.00152.87 C
ATOM 24 P A B1133 77.371 81.317 183.168 1.00153.74 P
ATOM 25 OP1 A B1133 78.210 80.392 183.971 1.00153.74 O
ATOM 26 OP2 A B1133 77.432 81.259 181.684 1.00153.47 O
ATOM 27 O5' A B1133 75.855 81.112 183.610 1.00153.42 O
TER
Atoms:
C4: (85.679,79.939,185.206)
N3: (84.924,81.070,184.954)
OP1: (91.255,78.996,180.379)
OP2: (89.686,78.049,182.180)
C2: (85.178,82.047,184.021)
C1': (86.660,82.846,182.235)
C3': (88.993,83.207,182.176)
O5': (89.388,80.370,181.342)
O4': (87.178,82.166,181.102)
C5': (89.351,81.420,180.347)
P: (89.899,78.903,180.980)
C4': (88.543,82.597,180.853)
C2': (87.714,83.865,182.677)
O2': (87.466,85.100,182.038)
N1: (86.326,81.845,183.264)
O4: (85.300,79.138,186.059)
O2: (84.443,83.014,183.879)
C6: (87.124,80.736,183.473)
C5: (86.847,79.805,184.391)
O3': (90.046,84.157,181.994)
N3: (84.924,81.070,184.954)
OP1: (91.255,78.996,180.379)
OP2: (89.686,78.049,182.180)
C2: (85.178,82.047,184.021)
C1': (86.660,82.846,182.235)
C3': (88.993,83.207,182.176)
O5': (89.388,80.370,181.342)
O4': (87.178,82.166,181.102)
C5': (89.351,81.420,180.347)
P: (89.899,78.903,180.980)
C4': (88.543,82.597,180.853)
C2': (87.714,83.865,182.677)
O2': (87.466,85.100,182.038)
N1: (86.326,81.845,183.264)
O4: (85.300,79.138,186.059)
O2: (84.443,83.014,183.879)
C6: (87.124,80.736,183.473)
C5: (86.847,79.805,184.391)
O3': (90.046,84.157,181.994)
OP1: (80.567,83.030,187.905)
OP2: (82.740,82.651,186.585)
C3': (78.881,83.473,183.305)
C1': (79.738,85.274,182.008)
C5': (79.562,84.536,185.556)
O4': (80.014,85.472,183.380)
C8: (82.031,84.301,181.407)
O2': (77.520,84.525,181.539)
C6: (83.239,86.369,178.825)
C5: (82.626,85.635,179.859)
C4: (81.380,86.063,180.275)
P: (81.563,83.501,186.906)
C4': (79.049,84.725,184.151)
C2': (78.810,84.058,181.891)
C2: (81.367,87.725,178.835)
N1: (82.569,87.431,178.328)
N3: (80.686,87.113,179.798)
N6: (84.436,86.072,178.312)
N7: (83.028,84.519,180.583)
N9: (80.999,85.198,181.273)
O5': (80.792,83.800,185.546)
O3': (77.669,82.818,183.666)
OP2: (82.740,82.651,186.585)
C3': (78.881,83.473,183.305)
C1': (79.738,85.274,182.008)
C5': (79.562,84.536,185.556)
O4': (80.014,85.472,183.380)
C8: (82.031,84.301,181.407)
O2': (77.520,84.525,181.539)
C6: (83.239,86.369,178.825)
C5: (82.626,85.635,179.859)
C4: (81.380,86.063,180.275)
P: (81.563,83.501,186.906)
C4': (79.049,84.725,184.151)
C2': (78.810,84.058,181.891)
C2: (81.367,87.725,178.835)
N1: (82.569,87.431,178.328)
N3: (80.686,87.113,179.798)
N6: (84.436,86.072,178.312)
N7: (83.028,84.519,180.583)
N9: (80.999,85.198,181.273)
O5': (80.792,83.800,185.546)
O3': (77.669,82.818,183.666)
Image (generated by PyMOL):