ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OH5:A2261:A2264

Extra

PDB:
ATOM 1 O3' A A2260 99.253 -45.823 -45.763 1.00 34.68 O
ATOM 2 P U A2261 99.019 -44.596 -46.742 1.00 33.71 P
ATOM 3 OP1 U A2261 98.869 -45.153 -48.106 1.00 40.39 O
ATOM 4 OP2 U A2261 100.091 -43.613 -46.489 1.00 44.54 O
ATOM 5 O5' U A2261 97.641 -44.019 -46.221 1.00 37.09 O
ATOM 6 C5' U A2261 96.429 -44.279 -46.907 1.00 39.06 C
ATOM 7 C4' U A2261 95.645 -43.017 -47.076 1.00 31.47 C
ATOM 8 O4' U A2261 95.053 -42.656 -45.808 1.00 27.63 O
ATOM 9 C3' U A2261 96.471 -41.807 -47.449 1.00 32.84 C
ATOM 10 O3' U A2261 96.770 -41.734 -48.835 1.00 37.53 O
ATOM 11 C2' U A2261 95.633 -40.658 -46.928 1.00 33.81 C
ATOM 12 O2' U A2261 94.548 -40.386 -47.805 1.00 30.67 O
ATOM 13 C1' U A2261 95.083 -41.265 -45.639 1.00 32.22 C
ATOM 14 N1 U A2261 95.937 -40.955 -44.487 1.00 30.65 N
ATOM 15 C2 U A2261 95.757 -39.714 -43.929 1.00 34.54 C
ATOM 16 O2 U A2261 94.935 -38.927 -44.342 1.00 41.59 O
ATOM 17 N3 U A2261 96.556 -39.409 -42.870 1.00 37.42 N
ATOM 18 C4 U A2261 97.532 -40.212 -42.332 1.00 51.65 C
ATOM 19 O4 U A2261 98.191 -39.792 -41.364 1.00 61.09 O
ATOM 20 C5 U A2261 97.661 -41.489 -42.975 1.00 41.73 C
ATOM 21 C6 U A2261 96.885 -41.816 -44.010 1.00 34.71 C
ATOM 22 P A A2262 98.201 -41.161 -49.316 1.00 45.18 P
ATOM 23 OP1 A A2262 98.458 -41.667 -50.692 1.00 42.23 O
ATOM 24 OP2 A A2262 99.174 -41.490 -48.247 1.00 45.35 O
ATOM 25 O5' A A2262 97.961 -39.593 -49.360 1.00 28.22 O
TER

ATOM 1 O3' A B2263 95.317 -34.895 -41.966 1.00 34.85 O
ATOM 2 P A B2264 96.306 -35.743 -41.046 1.00 32.40 P
ATOM 3 OP1 A B2264 97.631 -35.110 -41.149 1.00 32.63 O
ATOM 4 OP2 A B2264 96.171 -37.192 -41.436 1.00 24.12 O
ATOM 5 O5' A B2264 95.688 -35.525 -39.584 1.00 36.69 O
ATOM 6 C5' A B2264 95.308 -34.238 -39.110 1.00 28.66 C
ATOM 7 C4' A B2264 94.055 -34.294 -38.244 1.00 29.19 C
ATOM 8 O4' A B2264 92.952 -34.796 -39.026 1.00 33.84 O
ATOM 9 C3' A B2264 94.107 -35.200 -37.013 1.00 36.23 C
ATOM 10 O3' A B2264 94.632 -34.535 -35.865 1.00 36.83 O
ATOM 11 C2' A B2264 92.661 -35.650 -36.829 1.00 32.17 C
ATOM 12 O2' A B2264 91.941 -34.694 -36.066 1.00 35.56 O
ATOM 13 C1' A B2264 92.116 -35.611 -38.248 1.00 33.45 C
ATOM 14 N9 A B2264 92.054 -36.925 -38.889 1.00 34.21 N
ATOM 15 C8 A B2264 93.057 -37.784 -39.163 1.00 34.10 C
ATOM 16 N7 A B2264 92.662 -38.840 -39.824 1.00 31.30 N
ATOM 17 C5 A B2264 91.323 -38.647 -40.030 1.00 29.52 C
ATOM 18 C6 A B2264 90.350 -39.420 -40.679 1.00 35.97 C
ATOM 19 N6 A B2264 90.617 -40.593 -41.269 1.00 37.94 N
ATOM 20 N1 A B2264 89.086 -38.942 -40.698 1.00 35.83 N
ATOM 21 C2 A B2264 88.870 -37.764 -40.109 1.00 37.84 C
ATOM 22 N3 A B2264 89.715 -36.950 -39.468 1.00 37.00 N
ATOM 23 C4 A B2264 90.943 -37.460 -39.470 1.00 32.88 C
ATOM 24 P A B2265 95.700 -35.276 -34.923 1.00 42.94 P
ATOM 25 OP1 A B2265 97.026 -34.663 -35.192 1.00 64.56 O
ATOM 26 OP2 A B2265 95.540 -36.742 -35.140 1.00 34.15 O
ATOM 27 O5' A B2265 95.220 -34.875 -33.472 1.00 26.70 O
TER

Atoms:
C4: (97.532,-40.212,-42.332)
N3: (96.556,-39.409,-42.870)
OP1: (98.869,-45.153,-48.106)
OP2: (100.091,-43.613,-46.489)
C2: (95.757,-39.714,-43.929)
C1': (95.083,-41.265,-45.639)
C3': (96.471,-41.807,-47.449)
O5': (97.641,-44.019,-46.221)
O4': (95.053,-42.656,-45.808)
C5': (96.429,-44.279,-46.907)
P: (99.019,-44.596,-46.742)
C4': (95.645,-43.017,-47.076)
C2': (95.633,-40.658,-46.928)
O2': (94.548,-40.386,-47.805)
N1: (95.937,-40.955,-44.487)
O4: (98.191,-39.792,-41.364)
O2: (94.935,-38.927,-44.342)
C6: (96.885,-41.816,-44.010)
C5: (97.661,-41.489,-42.975)
O3': (96.770,-41.734,-48.835)
OP1: (97.631,-35.110,-41.149)
OP2: (96.171,-37.192,-41.436)
C3': (94.107,-35.200,-37.013)
C1': (92.116,-35.611,-38.248)
C5': (95.308,-34.238,-39.110)
O4': (92.952,-34.796,-39.026)
C8: (93.057,-37.784,-39.163)
O2': (91.941,-34.694,-36.066)
C6: (90.350,-39.420,-40.679)
C5: (91.323,-38.647,-40.030)
C4: (90.943,-37.460,-39.470)
P: (96.306,-35.743,-41.046)
C4': (94.055,-34.294,-38.244)
C2': (92.661,-35.650,-36.829)
C2: (88.870,-37.764,-40.109)
N1: (89.086,-38.942,-40.698)
N3: (89.715,-36.950,-39.468)
N6: (90.617,-40.593,-41.269)
N7: (92.662,-38.840,-39.824)
N9: (92.054,-36.925,-38.889)
O5': (95.688,-35.525,-39.584)
O3': (94.632,-34.535,-35.865)
Image (generated by PyMOL):
PyMOL image
show in jmol