Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3IVN:B49:B21
Extra
PDB:
ATOM 1 O3' G A 48 -12.454 -28.669 2.942 1.00 51.23 O
ATOM 2 P U A 49 -12.193 -29.229 1.462 1.00 54.60 P
ATOM 3 OP1 U A 49 -13.385 -30.022 1.061 1.00 52.05 O
ATOM 4 OP2 U A 49 -10.853 -29.871 1.485 1.00 53.46 O
ATOM 5 O5' U A 49 -12.123 -27.856 0.662 1.00 54.63 O
ATOM 6 C5' U A 49 -13.314 -27.147 0.330 1.00 54.15 C
ATOM 7 C4' U A 49 -13.067 -25.655 0.294 1.00 53.73 C
ATOM 8 O4' U A 49 -12.737 -25.157 1.625 1.00 52.53 O
ATOM 9 C3' U A 49 -11.942 -25.192 -0.630 1.00 54.45 C
ATOM 10 O3' U A 49 -12.291 -23.919 -1.134 1.00 55.71 O
ATOM 11 C2' U A 49 -10.775 -24.975 0.327 1.00 53.73 C
ATOM 12 O2' U A 49 -9.813 -24.059 -0.137 1.00 54.54 O
ATOM 13 C1' U A 49 -11.512 -24.442 1.546 1.00 52.21 C
ATOM 14 N1 U A 49 -10.784 -24.531 2.813 1.00 51.06 N
ATOM 15 C2 U A 49 -10.013 -23.438 3.163 1.00 50.71 C
ATOM 16 O2 U A 49 -9.925 -22.439 2.465 1.00 50.85 O
ATOM 17 N3 U A 49 -9.347 -23.558 4.356 1.00 48.73 N
ATOM 18 C4 U A 49 -9.377 -24.637 5.215 1.00 46.82 C
ATOM 19 O4 U A 49 -8.720 -24.594 6.257 1.00 45.76 O
ATOM 20 C5 U A 49 -10.201 -25.726 4.783 1.00 47.05 C
ATOM 21 C6 U A 49 -10.861 -25.639 3.623 1.00 49.37 C
ATOM 22 P A A 50 -12.198 -23.578 -2.698 1.00 57.84 P
ATOM 23 OP1 A A 50 -12.091 -24.863 -3.440 1.00 56.30 O
ATOM 24 OP2 A A 50 -11.135 -22.551 -2.852 1.00 54.61 O
ATOM 25 O5' A A 50 -13.633 -22.928 -2.890 1.00 56.96 O
TER
ATOM 1 O3' U B 20 -7.758 -18.906 5.055 1.00 49.76 O
ATOM 2 P A B 21 -6.994 -20.284 5.365 1.00 48.36 P
ATOM 3 OP1 A B 21 -5.539 -19.994 5.282 1.00 47.57 O
ATOM 4 OP2 A B 21 -7.585 -21.340 4.503 1.00 47.78 O
ATOM 5 O5' A B 21 -7.425 -20.507 6.871 1.00 45.70 O
ATOM 6 C5' A B 21 -7.313 -19.425 7.788 1.00 44.91 C
ATOM 7 C4' A B 21 -7.611 -19.887 9.186 1.00 43.85 C
ATOM 8 O4' A B 21 -8.974 -20.398 9.235 1.00 43.44 O
ATOM 9 C3' A B 21 -6.709 -21.022 9.657 1.00 42.75 C
ATOM 10 O3' A B 21 -6.445 -20.894 11.041 1.00 42.35 O
ATOM 11 C2' A B 21 -7.561 -22.263 9.392 1.00 43.19 C
ATOM 12 O2' A B 21 -7.247 -23.349 10.226 1.00 43.40 O
ATOM 13 C1' A B 21 -8.961 -21.745 9.672 1.00 42.21 C
ATOM 14 N9 A B 21 -10.005 -22.453 8.932 1.00 41.69 N
ATOM 15 C8 A B 21 -10.518 -22.137 7.699 1.00 43.00 C
ATOM 16 N7 A B 21 -11.450 -22.960 7.286 1.00 42.78 N
ATOM 17 C5 A B 21 -11.560 -23.881 8.316 1.00 41.81 C
ATOM 18 C6 A B 21 -12.378 -25.012 8.491 1.00 42.55 C
ATOM 19 N6 A B 21 -13.278 -25.424 7.593 1.00 43.71 N
ATOM 20 N1 A B 21 -12.239 -25.716 9.635 1.00 42.09 N
ATOM 21 C2 A B 21 -11.338 -25.303 10.535 1.00 42.13 C
ATOM 22 N3 A B 21 -10.513 -24.260 10.485 1.00 42.60 N
ATOM 23 C4 A B 21 -10.677 -23.580 9.337 1.00 41.72 C
ATOM 24 P U B 22 -4.933 -21.095 11.536 1.00 41.41 P
ATOM 25 OP1 U B 22 -4.206 -21.667 10.378 1.00 42.79 O
ATOM 26 OP2 U B 22 -5.012 -21.868 12.801 1.00 43.80 O
ATOM 27 O5' U B 22 -4.440 -19.615 11.837 1.00 42.50 O
TER
ATOM 2 P U A 49 -12.193 -29.229 1.462 1.00 54.60 P
ATOM 3 OP1 U A 49 -13.385 -30.022 1.061 1.00 52.05 O
ATOM 4 OP2 U A 49 -10.853 -29.871 1.485 1.00 53.46 O
ATOM 5 O5' U A 49 -12.123 -27.856 0.662 1.00 54.63 O
ATOM 6 C5' U A 49 -13.314 -27.147 0.330 1.00 54.15 C
ATOM 7 C4' U A 49 -13.067 -25.655 0.294 1.00 53.73 C
ATOM 8 O4' U A 49 -12.737 -25.157 1.625 1.00 52.53 O
ATOM 9 C3' U A 49 -11.942 -25.192 -0.630 1.00 54.45 C
ATOM 10 O3' U A 49 -12.291 -23.919 -1.134 1.00 55.71 O
ATOM 11 C2' U A 49 -10.775 -24.975 0.327 1.00 53.73 C
ATOM 12 O2' U A 49 -9.813 -24.059 -0.137 1.00 54.54 O
ATOM 13 C1' U A 49 -11.512 -24.442 1.546 1.00 52.21 C
ATOM 14 N1 U A 49 -10.784 -24.531 2.813 1.00 51.06 N
ATOM 15 C2 U A 49 -10.013 -23.438 3.163 1.00 50.71 C
ATOM 16 O2 U A 49 -9.925 -22.439 2.465 1.00 50.85 O
ATOM 17 N3 U A 49 -9.347 -23.558 4.356 1.00 48.73 N
ATOM 18 C4 U A 49 -9.377 -24.637 5.215 1.00 46.82 C
ATOM 19 O4 U A 49 -8.720 -24.594 6.257 1.00 45.76 O
ATOM 20 C5 U A 49 -10.201 -25.726 4.783 1.00 47.05 C
ATOM 21 C6 U A 49 -10.861 -25.639 3.623 1.00 49.37 C
ATOM 22 P A A 50 -12.198 -23.578 -2.698 1.00 57.84 P
ATOM 23 OP1 A A 50 -12.091 -24.863 -3.440 1.00 56.30 O
ATOM 24 OP2 A A 50 -11.135 -22.551 -2.852 1.00 54.61 O
ATOM 25 O5' A A 50 -13.633 -22.928 -2.890 1.00 56.96 O
TER
ATOM 1 O3' U B 20 -7.758 -18.906 5.055 1.00 49.76 O
ATOM 2 P A B 21 -6.994 -20.284 5.365 1.00 48.36 P
ATOM 3 OP1 A B 21 -5.539 -19.994 5.282 1.00 47.57 O
ATOM 4 OP2 A B 21 -7.585 -21.340 4.503 1.00 47.78 O
ATOM 5 O5' A B 21 -7.425 -20.507 6.871 1.00 45.70 O
ATOM 6 C5' A B 21 -7.313 -19.425 7.788 1.00 44.91 C
ATOM 7 C4' A B 21 -7.611 -19.887 9.186 1.00 43.85 C
ATOM 8 O4' A B 21 -8.974 -20.398 9.235 1.00 43.44 O
ATOM 9 C3' A B 21 -6.709 -21.022 9.657 1.00 42.75 C
ATOM 10 O3' A B 21 -6.445 -20.894 11.041 1.00 42.35 O
ATOM 11 C2' A B 21 -7.561 -22.263 9.392 1.00 43.19 C
ATOM 12 O2' A B 21 -7.247 -23.349 10.226 1.00 43.40 O
ATOM 13 C1' A B 21 -8.961 -21.745 9.672 1.00 42.21 C
ATOM 14 N9 A B 21 -10.005 -22.453 8.932 1.00 41.69 N
ATOM 15 C8 A B 21 -10.518 -22.137 7.699 1.00 43.00 C
ATOM 16 N7 A B 21 -11.450 -22.960 7.286 1.00 42.78 N
ATOM 17 C5 A B 21 -11.560 -23.881 8.316 1.00 41.81 C
ATOM 18 C6 A B 21 -12.378 -25.012 8.491 1.00 42.55 C
ATOM 19 N6 A B 21 -13.278 -25.424 7.593 1.00 43.71 N
ATOM 20 N1 A B 21 -12.239 -25.716 9.635 1.00 42.09 N
ATOM 21 C2 A B 21 -11.338 -25.303 10.535 1.00 42.13 C
ATOM 22 N3 A B 21 -10.513 -24.260 10.485 1.00 42.60 N
ATOM 23 C4 A B 21 -10.677 -23.580 9.337 1.00 41.72 C
ATOM 24 P U B 22 -4.933 -21.095 11.536 1.00 41.41 P
ATOM 25 OP1 U B 22 -4.206 -21.667 10.378 1.00 42.79 O
ATOM 26 OP2 U B 22 -5.012 -21.868 12.801 1.00 43.80 O
ATOM 27 O5' U B 22 -4.440 -19.615 11.837 1.00 42.50 O
TER
Atoms:
C4: (-9.377,-24.637,5.215)
N3: (-9.347,-23.558,4.356)
OP1: (-13.385,-30.022,1.061)
OP2: (-10.853,-29.871,1.485)
C2: (-10.013,-23.438,3.163)
C1': (-11.512,-24.442,1.546)
C3': (-11.942,-25.192,-0.630)
O5': (-12.123,-27.856,0.662)
O4': (-12.737,-25.157,1.625)
C5': (-13.314,-27.147,0.330)
P: (-12.193,-29.229,1.462)
C4': (-13.067,-25.655,0.294)
C2': (-10.775,-24.975,0.327)
O2': (-9.813,-24.059,-0.137)
N1: (-10.784,-24.531,2.813)
O4: (-8.720,-24.594,6.257)
O2: (-9.925,-22.439,2.465)
C6: (-10.861,-25.639,3.623)
C5: (-10.201,-25.726,4.783)
O3': (-12.291,-23.919,-1.134)
N3: (-9.347,-23.558,4.356)
OP1: (-13.385,-30.022,1.061)
OP2: (-10.853,-29.871,1.485)
C2: (-10.013,-23.438,3.163)
C1': (-11.512,-24.442,1.546)
C3': (-11.942,-25.192,-0.630)
O5': (-12.123,-27.856,0.662)
O4': (-12.737,-25.157,1.625)
C5': (-13.314,-27.147,0.330)
P: (-12.193,-29.229,1.462)
C4': (-13.067,-25.655,0.294)
C2': (-10.775,-24.975,0.327)
O2': (-9.813,-24.059,-0.137)
N1: (-10.784,-24.531,2.813)
O4: (-8.720,-24.594,6.257)
O2: (-9.925,-22.439,2.465)
C6: (-10.861,-25.639,3.623)
C5: (-10.201,-25.726,4.783)
O3': (-12.291,-23.919,-1.134)
OP1: (-5.539,-19.994,5.282)
OP2: (-7.585,-21.340,4.503)
C3': (-6.709,-21.022,9.657)
C1': (-8.961,-21.745,9.672)
C5': (-7.313,-19.425,7.788)
O4': (-8.974,-20.398,9.235)
C8: (-10.518,-22.137,7.699)
O2': (-7.247,-23.349,10.226)
C6: (-12.378,-25.012,8.491)
C5: (-11.560,-23.881,8.316)
C4: (-10.677,-23.580,9.337)
P: (-6.994,-20.284,5.365)
C4': (-7.611,-19.887,9.186)
C2': (-7.561,-22.263,9.392)
C2: (-11.338,-25.303,10.535)
N1: (-12.239,-25.716,9.635)
N3: (-10.513,-24.260,10.485)
N6: (-13.278,-25.424,7.593)
N7: (-11.450,-22.960,7.286)
N9: (-10.005,-22.453,8.932)
O5': (-7.425,-20.507,6.871)
O3': (-6.445,-20.894,11.041)
OP2: (-7.585,-21.340,4.503)
C3': (-6.709,-21.022,9.657)
C1': (-8.961,-21.745,9.672)
C5': (-7.313,-19.425,7.788)
O4': (-8.974,-20.398,9.235)
C8: (-10.518,-22.137,7.699)
O2': (-7.247,-23.349,10.226)
C6: (-12.378,-25.012,8.491)
C5: (-11.560,-23.881,8.316)
C4: (-10.677,-23.580,9.337)
P: (-6.994,-20.284,5.365)
C4': (-7.611,-19.887,9.186)
C2': (-7.561,-22.263,9.392)
C2: (-11.338,-25.303,10.535)
N1: (-12.239,-25.716,9.635)
N3: (-10.513,-24.260,10.485)
N6: (-13.278,-25.424,7.593)
N7: (-11.450,-22.960,7.286)
N9: (-10.005,-22.453,8.932)
O5': (-7.425,-20.507,6.871)
O3': (-6.445,-20.894,11.041)
Image (generated by PyMOL):