Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1552:A1420
Extra
PDB:
ATOM 1 O3' C A1551 -15.804 -18.749 16.344 1.00 3.21 O
ATOM 2 P U A1552 -16.301 -19.155 17.819 1.00 26.18 P
ATOM 3 OP1 U A1552 -15.158 -19.803 18.496 1.00 26.18 O
ATOM 4 OP2 U A1552 -17.557 -19.915 17.657 1.00 26.18 O
ATOM 5 O5' U A1552 -16.612 -17.756 18.500 1.00 26.18 O
ATOM 6 C5' U A1552 -17.893 -17.156 18.383 1.00 26.18 C
ATOM 7 C4' U A1552 -18.187 -16.264 19.557 1.00 26.18 C
ATOM 8 O4' U A1552 -18.226 -17.072 20.760 1.00 26.18 O
ATOM 9 C3' U A1552 -17.147 -15.183 19.819 1.00 26.18 C
ATOM 10 O3' U A1552 -17.776 -14.051 20.371 1.00 26.18 O
ATOM 11 C2' U A1552 -16.259 -15.816 20.867 1.00 26.18 C
ATOM 12 O2' U A1552 -15.539 -14.898 21.660 1.00 26.18 O
ATOM 13 C1' U A1552 -17.278 -16.591 21.683 1.00 26.18 C
ATOM 14 N1 U A1552 -16.710 -17.723 22.376 1.00 26.75 N
ATOM 15 C2 U A1552 -17.060 -17.909 23.687 1.00 26.75 C
ATOM 16 O2 U A1552 -17.838 -17.186 24.266 1.00 26.75 O
ATOM 17 N3 U A1552 -16.464 -18.970 24.300 1.00 26.75 N
ATOM 18 C4 U A1552 -15.572 -19.843 23.715 1.00 26.75 C
ATOM 19 O4 U A1552 -15.111 -20.762 24.394 1.00 26.75 O
ATOM 20 C5 U A1552 -15.250 -19.576 22.341 1.00 26.75 C
ATOM 21 C6 U A1552 -15.818 -18.531 21.734 1.00 26.75 C
ATOM 22 P G A1553 -18.527 -13.031 19.409 1.00 9.18 P
ATOM 23 OP1 G A1553 -19.214 -12.032 20.278 1.00 9.18 O
ATOM 24 OP2 G A1553 -19.341 -13.850 18.459 1.00 9.18 O
ATOM 25 O5' G A1553 -17.332 -12.329 18.636 1.00 9.18 O
TER
ATOM 1 O3' G B1419 -16.888 -18.346 29.477 1.00 0.01 O
ATOM 2 P A B1420 -18.083 -19.177 28.835 1.00 0.14 P
ATOM 3 OP1 A B1420 -18.314 -20.362 29.725 1.00 0.14 O
ATOM 4 OP2 A B1420 -17.714 -19.415 27.418 1.00 0.14 O
ATOM 5 O5' A B1420 -19.307 -18.158 28.905 1.00 0.14 O
ATOM 6 C5' A B1420 -19.712 -17.459 27.730 1.00 0.14 C
ATOM 7 C4' A B1420 -20.631 -16.313 28.035 1.00 0.14 C
ATOM 8 O4' A B1420 -21.509 -16.692 29.126 1.00 0.14 O
ATOM 9 C3' A B1420 -19.939 -15.026 28.465 1.00 0.14 C
ATOM 10 O3' A B1420 -20.569 -13.896 27.837 1.00 0.14 O
ATOM 11 C2' A B1420 -20.166 -14.990 29.986 1.00 0.14 C
ATOM 12 O2' A B1420 -20.211 -13.694 30.546 1.00 0.14 O
ATOM 13 C1' A B1420 -21.501 -15.690 30.120 1.00 0.14 C
ATOM 14 N9 A B1420 -21.722 -16.329 31.423 1.00 0.01 N
ATOM 15 C8 A B1420 -21.092 -17.436 31.929 1.00 0.01 C
ATOM 16 N7 A B1420 -21.523 -17.796 33.124 1.00 0.01 N
ATOM 17 C5 A B1420 -22.501 -16.879 33.423 1.00 0.01 C
ATOM 18 C6 A B1420 -23.324 -16.728 34.531 1.00 0.01 C
ATOM 19 N6 A B1420 -23.244 -17.541 35.558 1.00 0.01 N
ATOM 20 N1 A B1420 -24.224 -15.743 34.577 1.00 0.01 N
ATOM 21 C2 A B1420 -24.258 -14.944 33.527 1.00 0.01 C
ATOM 22 N3 A B1420 -23.531 -14.985 32.418 1.00 0.01 N
ATOM 23 C4 A B1420 -22.646 -15.983 32.403 1.00 0.01 C
ATOM 24 P C B1421 -20.403 -13.622 26.249 1.00 4.06 P
ATOM 25 OP1 C B1421 -19.167 -14.319 25.793 1.00 4.06 O
ATOM 26 OP2 C B1421 -20.510 -12.160 26.047 1.00 4.06 O
ATOM 27 O5' C B1421 -21.684 -14.333 25.643 1.00 4.06 O
TER
ATOM 2 P U A1552 -16.301 -19.155 17.819 1.00 26.18 P
ATOM 3 OP1 U A1552 -15.158 -19.803 18.496 1.00 26.18 O
ATOM 4 OP2 U A1552 -17.557 -19.915 17.657 1.00 26.18 O
ATOM 5 O5' U A1552 -16.612 -17.756 18.500 1.00 26.18 O
ATOM 6 C5' U A1552 -17.893 -17.156 18.383 1.00 26.18 C
ATOM 7 C4' U A1552 -18.187 -16.264 19.557 1.00 26.18 C
ATOM 8 O4' U A1552 -18.226 -17.072 20.760 1.00 26.18 O
ATOM 9 C3' U A1552 -17.147 -15.183 19.819 1.00 26.18 C
ATOM 10 O3' U A1552 -17.776 -14.051 20.371 1.00 26.18 O
ATOM 11 C2' U A1552 -16.259 -15.816 20.867 1.00 26.18 C
ATOM 12 O2' U A1552 -15.539 -14.898 21.660 1.00 26.18 O
ATOM 13 C1' U A1552 -17.278 -16.591 21.683 1.00 26.18 C
ATOM 14 N1 U A1552 -16.710 -17.723 22.376 1.00 26.75 N
ATOM 15 C2 U A1552 -17.060 -17.909 23.687 1.00 26.75 C
ATOM 16 O2 U A1552 -17.838 -17.186 24.266 1.00 26.75 O
ATOM 17 N3 U A1552 -16.464 -18.970 24.300 1.00 26.75 N
ATOM 18 C4 U A1552 -15.572 -19.843 23.715 1.00 26.75 C
ATOM 19 O4 U A1552 -15.111 -20.762 24.394 1.00 26.75 O
ATOM 20 C5 U A1552 -15.250 -19.576 22.341 1.00 26.75 C
ATOM 21 C6 U A1552 -15.818 -18.531 21.734 1.00 26.75 C
ATOM 22 P G A1553 -18.527 -13.031 19.409 1.00 9.18 P
ATOM 23 OP1 G A1553 -19.214 -12.032 20.278 1.00 9.18 O
ATOM 24 OP2 G A1553 -19.341 -13.850 18.459 1.00 9.18 O
ATOM 25 O5' G A1553 -17.332 -12.329 18.636 1.00 9.18 O
TER
ATOM 1 O3' G B1419 -16.888 -18.346 29.477 1.00 0.01 O
ATOM 2 P A B1420 -18.083 -19.177 28.835 1.00 0.14 P
ATOM 3 OP1 A B1420 -18.314 -20.362 29.725 1.00 0.14 O
ATOM 4 OP2 A B1420 -17.714 -19.415 27.418 1.00 0.14 O
ATOM 5 O5' A B1420 -19.307 -18.158 28.905 1.00 0.14 O
ATOM 6 C5' A B1420 -19.712 -17.459 27.730 1.00 0.14 C
ATOM 7 C4' A B1420 -20.631 -16.313 28.035 1.00 0.14 C
ATOM 8 O4' A B1420 -21.509 -16.692 29.126 1.00 0.14 O
ATOM 9 C3' A B1420 -19.939 -15.026 28.465 1.00 0.14 C
ATOM 10 O3' A B1420 -20.569 -13.896 27.837 1.00 0.14 O
ATOM 11 C2' A B1420 -20.166 -14.990 29.986 1.00 0.14 C
ATOM 12 O2' A B1420 -20.211 -13.694 30.546 1.00 0.14 O
ATOM 13 C1' A B1420 -21.501 -15.690 30.120 1.00 0.14 C
ATOM 14 N9 A B1420 -21.722 -16.329 31.423 1.00 0.01 N
ATOM 15 C8 A B1420 -21.092 -17.436 31.929 1.00 0.01 C
ATOM 16 N7 A B1420 -21.523 -17.796 33.124 1.00 0.01 N
ATOM 17 C5 A B1420 -22.501 -16.879 33.423 1.00 0.01 C
ATOM 18 C6 A B1420 -23.324 -16.728 34.531 1.00 0.01 C
ATOM 19 N6 A B1420 -23.244 -17.541 35.558 1.00 0.01 N
ATOM 20 N1 A B1420 -24.224 -15.743 34.577 1.00 0.01 N
ATOM 21 C2 A B1420 -24.258 -14.944 33.527 1.00 0.01 C
ATOM 22 N3 A B1420 -23.531 -14.985 32.418 1.00 0.01 N
ATOM 23 C4 A B1420 -22.646 -15.983 32.403 1.00 0.01 C
ATOM 24 P C B1421 -20.403 -13.622 26.249 1.00 4.06 P
ATOM 25 OP1 C B1421 -19.167 -14.319 25.793 1.00 4.06 O
ATOM 26 OP2 C B1421 -20.510 -12.160 26.047 1.00 4.06 O
ATOM 27 O5' C B1421 -21.684 -14.333 25.643 1.00 4.06 O
TER
Atoms:
C4: (-15.572,-19.843,23.715)
N3: (-16.464,-18.970,24.300)
OP1: (-15.158,-19.803,18.496)
OP2: (-17.557,-19.915,17.657)
C2: (-17.060,-17.909,23.687)
C1': (-17.278,-16.591,21.683)
C3': (-17.147,-15.183,19.819)
O5': (-16.612,-17.756,18.500)
O4': (-18.226,-17.072,20.760)
C5': (-17.893,-17.156,18.383)
P: (-16.301,-19.155,17.819)
C4': (-18.187,-16.264,19.557)
C2': (-16.259,-15.816,20.867)
O2': (-15.539,-14.898,21.660)
N1: (-16.710,-17.723,22.376)
O4: (-15.111,-20.762,24.394)
O2: (-17.838,-17.186,24.266)
C6: (-15.818,-18.531,21.734)
C5: (-15.250,-19.576,22.341)
O3': (-17.776,-14.051,20.371)
N3: (-16.464,-18.970,24.300)
OP1: (-15.158,-19.803,18.496)
OP2: (-17.557,-19.915,17.657)
C2: (-17.060,-17.909,23.687)
C1': (-17.278,-16.591,21.683)
C3': (-17.147,-15.183,19.819)
O5': (-16.612,-17.756,18.500)
O4': (-18.226,-17.072,20.760)
C5': (-17.893,-17.156,18.383)
P: (-16.301,-19.155,17.819)
C4': (-18.187,-16.264,19.557)
C2': (-16.259,-15.816,20.867)
O2': (-15.539,-14.898,21.660)
N1: (-16.710,-17.723,22.376)
O4: (-15.111,-20.762,24.394)
O2: (-17.838,-17.186,24.266)
C6: (-15.818,-18.531,21.734)
C5: (-15.250,-19.576,22.341)
O3': (-17.776,-14.051,20.371)
OP1: (-18.314,-20.362,29.725)
OP2: (-17.714,-19.415,27.418)
C3': (-19.939,-15.026,28.465)
C1': (-21.501,-15.690,30.120)
C5': (-19.712,-17.459,27.730)
O4': (-21.509,-16.692,29.126)
C8: (-21.092,-17.436,31.929)
O2': (-20.211,-13.694,30.546)
C6: (-23.324,-16.728,34.531)
C5: (-22.501,-16.879,33.423)
C4: (-22.646,-15.983,32.403)
P: (-18.083,-19.177,28.835)
C4': (-20.631,-16.313,28.035)
C2': (-20.166,-14.990,29.986)
C2: (-24.258,-14.944,33.527)
N1: (-24.224,-15.743,34.577)
N3: (-23.531,-14.985,32.418)
N6: (-23.244,-17.541,35.558)
N7: (-21.523,-17.796,33.124)
N9: (-21.722,-16.329,31.423)
O5': (-19.307,-18.158,28.905)
O3': (-20.569,-13.896,27.837)
OP2: (-17.714,-19.415,27.418)
C3': (-19.939,-15.026,28.465)
C1': (-21.501,-15.690,30.120)
C5': (-19.712,-17.459,27.730)
O4': (-21.509,-16.692,29.126)
C8: (-21.092,-17.436,31.929)
O2': (-20.211,-13.694,30.546)
C6: (-23.324,-16.728,34.531)
C5: (-22.501,-16.879,33.423)
C4: (-22.646,-15.983,32.403)
P: (-18.083,-19.177,28.835)
C4': (-20.631,-16.313,28.035)
C2': (-20.166,-14.990,29.986)
C2: (-24.258,-14.944,33.527)
N1: (-24.224,-15.743,34.577)
N3: (-23.531,-14.985,32.418)
N6: (-23.244,-17.541,35.558)
N7: (-21.523,-17.796,33.124)
N9: (-21.722,-16.329,31.423)
O5': (-19.307,-18.158,28.905)
O3': (-20.569,-13.896,27.837)
Image (generated by PyMOL):