Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2DR2:B53:B56
Extra
PDB:
ATOM 1 O3' U A 52 40.740 123.068 160.030 1.00162.02 O
ATOM 2 P U A 53 40.329 123.107 161.585 1.00165.03 P
ATOM 3 OP1 U A 53 40.350 124.523 162.031 1.00164.76 O
ATOM 4 OP2 U A 53 41.159 122.101 162.297 1.00164.38 O
ATOM 5 O5' U A 53 38.818 122.599 161.607 1.00167.27 O
ATOM 6 C5' U A 53 37.736 123.513 161.440 1.00171.15 C
ATOM 7 C4' U A 53 36.443 122.884 161.908 1.00173.11 C
ATOM 8 O4' U A 53 36.147 121.729 161.078 1.00175.41 O
ATOM 9 C3' U A 53 36.448 122.337 163.329 1.00173.49 C
ATOM 10 O3' U A 53 36.143 123.353 164.282 1.00171.28 O
ATOM 11 C2' U A 53 35.344 121.290 163.269 1.00175.13 C
ATOM 12 O2' U A 53 34.054 121.856 163.364 1.00175.81 O
ATOM 13 C1' U A 53 35.551 120.713 161.868 1.00176.75 C
ATOM 14 N1 U A 53 36.432 119.536 161.846 1.00178.71 N
ATOM 15 C2 U A 53 36.016 118.404 162.523 1.00180.02 C
ATOM 16 O2 U A 53 34.973 118.352 163.145 1.00180.78 O
ATOM 17 N3 U A 53 36.874 117.335 162.448 1.00180.43 N
ATOM 18 C4 U A 53 38.082 117.288 161.790 1.00180.06 C
ATOM 19 O4 U A 53 38.738 116.246 161.805 1.00180.50 O
ATOM 20 C5 U A 53 38.447 118.502 161.126 1.00179.66 C
ATOM 21 C6 U A 53 37.630 119.556 161.173 1.00179.06 C
ATOM 22 P C A 54 36.973 123.435 165.660 1.00169.54 P
ATOM 23 OP1 C A 54 36.880 124.825 166.172 1.00169.78 O
ATOM 24 OP2 C A 54 38.307 122.831 165.413 1.00169.64 O
ATOM 25 O5' C A 54 36.181 122.488 166.667 1.00166.94 O
TER
ATOM 1 O3' G B 55 33.647 113.261 164.021 1.00155.14 O
ATOM 2 P A B 56 34.857 112.944 163.008 1.00154.49 P
ATOM 3 OP1 A B 56 35.504 111.681 163.444 1.00153.59 O
ATOM 4 OP2 A B 56 35.674 114.182 162.875 1.00153.33 O
ATOM 5 O5' A B 56 34.125 112.673 161.619 1.00152.97 O
ATOM 6 C5' A B 56 32.915 111.928 161.579 1.00150.97 C
ATOM 7 C4' A B 56 32.370 111.870 160.173 1.00150.29 C
ATOM 8 O4' A B 56 32.178 113.216 159.668 1.00148.79 O
ATOM 9 C3' A B 56 33.245 111.207 159.123 1.00149.40 C
ATOM 10 O3' A B 56 33.178 109.783 159.291 1.00149.54 O
ATOM 11 C2' A B 56 32.684 111.790 157.827 1.00149.37 C
ATOM 12 O2' A B 56 31.502 111.158 157.385 1.00149.56 O
ATOM 13 C1' A B 56 32.331 113.217 158.260 1.00148.19 C
ATOM 14 N9 A B 56 33.311 114.240 157.898 1.00146.10 N
ATOM 15 C8 A B 56 34.579 114.417 158.393 1.00145.70 C
ATOM 16 N7 A B 56 35.208 115.446 157.877 1.00145.29 N
ATOM 17 C5 A B 56 34.294 115.980 156.978 1.00144.36 C
ATOM 18 C6 A B 56 34.351 117.091 156.111 1.00143.04 C
ATOM 19 N6 A B 56 35.410 117.898 156.008 1.00141.50 N
ATOM 20 N1 A B 56 33.267 117.347 155.345 1.00142.21 N
ATOM 21 C2 A B 56 32.206 116.540 155.451 1.00142.77 C
ATOM 22 N3 A B 56 32.031 115.472 156.227 1.00143.78 N
ATOM 23 C4 A B 56 33.124 115.243 156.975 1.00144.70 C
ATOM 24 P A B 57 32.728 108.818 158.079 1.00148.84 P
ATOM 25 OP1 A B 57 31.247 108.876 157.967 1.00149.20 O
ATOM 26 OP2 A B 57 33.391 107.509 158.315 1.00149.60 O
ATOM 27 O5' A B 57 33.365 109.448 156.760 1.00149.21 O
TER
ATOM 2 P U A 53 40.329 123.107 161.585 1.00165.03 P
ATOM 3 OP1 U A 53 40.350 124.523 162.031 1.00164.76 O
ATOM 4 OP2 U A 53 41.159 122.101 162.297 1.00164.38 O
ATOM 5 O5' U A 53 38.818 122.599 161.607 1.00167.27 O
ATOM 6 C5' U A 53 37.736 123.513 161.440 1.00171.15 C
ATOM 7 C4' U A 53 36.443 122.884 161.908 1.00173.11 C
ATOM 8 O4' U A 53 36.147 121.729 161.078 1.00175.41 O
ATOM 9 C3' U A 53 36.448 122.337 163.329 1.00173.49 C
ATOM 10 O3' U A 53 36.143 123.353 164.282 1.00171.28 O
ATOM 11 C2' U A 53 35.344 121.290 163.269 1.00175.13 C
ATOM 12 O2' U A 53 34.054 121.856 163.364 1.00175.81 O
ATOM 13 C1' U A 53 35.551 120.713 161.868 1.00176.75 C
ATOM 14 N1 U A 53 36.432 119.536 161.846 1.00178.71 N
ATOM 15 C2 U A 53 36.016 118.404 162.523 1.00180.02 C
ATOM 16 O2 U A 53 34.973 118.352 163.145 1.00180.78 O
ATOM 17 N3 U A 53 36.874 117.335 162.448 1.00180.43 N
ATOM 18 C4 U A 53 38.082 117.288 161.790 1.00180.06 C
ATOM 19 O4 U A 53 38.738 116.246 161.805 1.00180.50 O
ATOM 20 C5 U A 53 38.447 118.502 161.126 1.00179.66 C
ATOM 21 C6 U A 53 37.630 119.556 161.173 1.00179.06 C
ATOM 22 P C A 54 36.973 123.435 165.660 1.00169.54 P
ATOM 23 OP1 C A 54 36.880 124.825 166.172 1.00169.78 O
ATOM 24 OP2 C A 54 38.307 122.831 165.413 1.00169.64 O
ATOM 25 O5' C A 54 36.181 122.488 166.667 1.00166.94 O
TER
ATOM 1 O3' G B 55 33.647 113.261 164.021 1.00155.14 O
ATOM 2 P A B 56 34.857 112.944 163.008 1.00154.49 P
ATOM 3 OP1 A B 56 35.504 111.681 163.444 1.00153.59 O
ATOM 4 OP2 A B 56 35.674 114.182 162.875 1.00153.33 O
ATOM 5 O5' A B 56 34.125 112.673 161.619 1.00152.97 O
ATOM 6 C5' A B 56 32.915 111.928 161.579 1.00150.97 C
ATOM 7 C4' A B 56 32.370 111.870 160.173 1.00150.29 C
ATOM 8 O4' A B 56 32.178 113.216 159.668 1.00148.79 O
ATOM 9 C3' A B 56 33.245 111.207 159.123 1.00149.40 C
ATOM 10 O3' A B 56 33.178 109.783 159.291 1.00149.54 O
ATOM 11 C2' A B 56 32.684 111.790 157.827 1.00149.37 C
ATOM 12 O2' A B 56 31.502 111.158 157.385 1.00149.56 O
ATOM 13 C1' A B 56 32.331 113.217 158.260 1.00148.19 C
ATOM 14 N9 A B 56 33.311 114.240 157.898 1.00146.10 N
ATOM 15 C8 A B 56 34.579 114.417 158.393 1.00145.70 C
ATOM 16 N7 A B 56 35.208 115.446 157.877 1.00145.29 N
ATOM 17 C5 A B 56 34.294 115.980 156.978 1.00144.36 C
ATOM 18 C6 A B 56 34.351 117.091 156.111 1.00143.04 C
ATOM 19 N6 A B 56 35.410 117.898 156.008 1.00141.50 N
ATOM 20 N1 A B 56 33.267 117.347 155.345 1.00142.21 N
ATOM 21 C2 A B 56 32.206 116.540 155.451 1.00142.77 C
ATOM 22 N3 A B 56 32.031 115.472 156.227 1.00143.78 N
ATOM 23 C4 A B 56 33.124 115.243 156.975 1.00144.70 C
ATOM 24 P A B 57 32.728 108.818 158.079 1.00148.84 P
ATOM 25 OP1 A B 57 31.247 108.876 157.967 1.00149.20 O
ATOM 26 OP2 A B 57 33.391 107.509 158.315 1.00149.60 O
ATOM 27 O5' A B 57 33.365 109.448 156.760 1.00149.21 O
TER
Atoms:
C4: (38.082,117.288,161.790)
N3: (36.874,117.335,162.448)
OP1: (40.350,124.523,162.031)
OP2: (41.159,122.101,162.297)
C2: (36.016,118.404,162.523)
C1': (35.551,120.713,161.868)
C3': (36.448,122.337,163.329)
O5': (38.818,122.599,161.607)
O4': (36.147,121.729,161.078)
C5': (37.736,123.513,161.440)
P: (40.329,123.107,161.585)
C4': (36.443,122.884,161.908)
C2': (35.344,121.290,163.269)
O2': (34.054,121.856,163.364)
N1: (36.432,119.536,161.846)
O4: (38.738,116.246,161.805)
O2: (34.973,118.352,163.145)
C6: (37.630,119.556,161.173)
C5: (38.447,118.502,161.126)
O3': (36.143,123.353,164.282)
N3: (36.874,117.335,162.448)
OP1: (40.350,124.523,162.031)
OP2: (41.159,122.101,162.297)
C2: (36.016,118.404,162.523)
C1': (35.551,120.713,161.868)
C3': (36.448,122.337,163.329)
O5': (38.818,122.599,161.607)
O4': (36.147,121.729,161.078)
C5': (37.736,123.513,161.440)
P: (40.329,123.107,161.585)
C4': (36.443,122.884,161.908)
C2': (35.344,121.290,163.269)
O2': (34.054,121.856,163.364)
N1: (36.432,119.536,161.846)
O4: (38.738,116.246,161.805)
O2: (34.973,118.352,163.145)
C6: (37.630,119.556,161.173)
C5: (38.447,118.502,161.126)
O3': (36.143,123.353,164.282)
OP1: (35.504,111.681,163.444)
OP2: (35.674,114.182,162.875)
C3': (33.245,111.207,159.123)
C1': (32.331,113.217,158.260)
C5': (32.915,111.928,161.579)
O4': (32.178,113.216,159.668)
C8: (34.579,114.417,158.393)
O2': (31.502,111.158,157.385)
C6: (34.351,117.091,156.111)
C5: (34.294,115.980,156.978)
C4: (33.124,115.243,156.975)
P: (34.857,112.944,163.008)
C4': (32.370,111.870,160.173)
C2': (32.684,111.790,157.827)
C2: (32.206,116.540,155.451)
N1: (33.267,117.347,155.345)
N3: (32.031,115.472,156.227)
N6: (35.410,117.898,156.008)
N7: (35.208,115.446,157.877)
N9: (33.311,114.240,157.898)
O5': (34.125,112.673,161.619)
O3': (33.178,109.783,159.291)
OP2: (35.674,114.182,162.875)
C3': (33.245,111.207,159.123)
C1': (32.331,113.217,158.260)
C5': (32.915,111.928,161.579)
O4': (32.178,113.216,159.668)
C8: (34.579,114.417,158.393)
O2': (31.502,111.158,157.385)
C6: (34.351,117.091,156.111)
C5: (34.294,115.980,156.978)
C4: (33.124,115.243,156.975)
P: (34.857,112.944,163.008)
C4': (32.370,111.870,160.173)
C2': (32.684,111.790,157.827)
C2: (32.206,116.540,155.451)
N1: (33.267,117.347,155.345)
N3: (32.031,115.472,156.227)
N6: (35.410,117.898,156.008)
N7: (35.208,115.446,157.877)
N9: (33.311,114.240,157.898)
O5': (34.125,112.673,161.619)
O3': (33.178,109.783,159.291)
Image (generated by PyMOL):