Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11399:12829
Extra
PDB:
ATOM 1 O3' A A1398 29.790 44.402 90.894 1.00 57.65 O
ATOM 2 P U A1399 30.642 45.767 91.014 1.00 70.73 P
ATOM 3 OP1 U A1399 32.034 45.443 90.596 1.00 70.47 O
ATOM 4 OP2 U A1399 30.398 46.319 92.391 1.00 71.18 O
ATOM 5 O5' U A1399 29.978 46.711 89.911 1.00 70.92 O
ATOM 6 C5' U A1399 30.294 46.543 88.534 1.00 70.62 C
ATOM 7 C4' U A1399 30.079 47.806 87.750 1.00 70.97 C
ATOM 8 O4' U A1399 28.719 48.271 87.953 1.00 71.26 O
ATOM 9 C3' U A1399 30.991 48.964 88.133 1.00 71.41 C
ATOM 10 O3' U A1399 31.348 49.686 86.969 1.00 71.48 O
ATOM 11 C2' U A1399 30.104 49.821 89.009 1.00 71.92 C
ATOM 12 O2' U A1399 30.469 51.177 89.054 1.00 72.43 O
ATOM 13 C1' U A1399 28.750 49.619 88.347 1.00 71.83 C
ATOM 14 N1 U A1399 27.629 49.876 89.232 1.00 72.14 N
ATOM 15 C2 U A1399 26.937 51.013 88.924 1.00 72.58 C
ATOM 16 O2 U A1399 27.238 51.686 87.974 1.00 72.67 O
ATOM 17 N3 U A1399 25.883 51.338 89.731 1.00 72.92 N
ATOM 18 C4 U A1399 25.487 50.642 90.851 1.00 72.86 C
ATOM 19 O4 U A1399 24.521 51.057 91.506 1.00 73.22 O
ATOM 20 C5 U A1399 26.292 49.457 91.113 1.00 72.39 C
ATOM 21 C6 U A1399 27.327 49.109 90.318 1.00 72.05 C
ATOM 22 P A A1400 32.811 49.493 86.367 1.00 52.59 P
ATOM 23 OP1 A A1400 32.705 49.552 84.894 1.00 52.41 O
ATOM 24 OP2 A A1400 33.382 48.267 86.987 1.00 52.19 O
ATOM 25 O5' A A1400 33.574 50.772 86.911 1.00 53.12 O
TER
ATOM 1 O3' C B2828 24.180 55.802 90.735 1.00 57.11 O
ATOM 2 P A B2829 23.690 55.123 89.390 1.00 54.36 P
ATOM 3 OP1 A B2829 24.516 53.941 89.156 1.00 53.76 O
ATOM 4 OP2 A B2829 23.673 56.193 88.364 1.00 54.65 O
ATOM 5 O5' A B2829 22.214 54.674 89.753 1.00 54.37 O
ATOM 6 C5' A B2829 22.003 53.673 90.722 1.00 54.14 C
ATOM 7 C4' A B2829 20.568 53.233 90.763 1.00 54.11 C
ATOM 8 O4' A B2829 19.747 54.292 91.278 1.00 54.72 O
ATOM 9 C3' A B2829 19.942 52.865 89.432 1.00 53.82 C
ATOM 10 O3' A B2829 20.257 51.507 89.064 1.00 53.19 O
ATOM 11 C2' A B2829 18.450 53.105 89.694 1.00 54.12 C
ATOM 12 O2' A B2829 17.867 51.961 90.327 1.00 53.83 O
ATOM 13 C1' A B2829 18.469 54.240 90.716 1.00 54.75 C
ATOM 14 N9 A B2829 18.139 55.578 90.161 1.00 55.25 N
ATOM 15 C8 A B2829 19.011 56.486 89.628 1.00 55.45 C
ATOM 16 N7 A B2829 18.495 57.653 89.273 1.00 55.96 N
ATOM 17 C5 A B2829 17.181 57.544 89.641 1.00 56.12 C
ATOM 18 C6 A B2829 16.125 58.474 89.544 1.00 56.64 C
ATOM 19 N6 A B2829 16.226 59.684 89.015 1.00 57.09 N
ATOM 20 N1 A B2829 14.931 58.106 90.031 1.00 56.72 N
ATOM 21 C2 A B2829 14.851 56.864 90.551 1.00 56.27 C
ATOM 22 N3 A B2829 15.778 55.887 90.691 1.00 55.75 N
ATOM 23 C4 A B2829 16.956 56.296 90.213 1.00 55.70 C
ATOM 24 P U B2830 20.256 50.989 87.547 1.00 86.34 P
ATOM 25 OP1 U B2830 19.749 52.060 86.696 1.00 86.70 O
ATOM 26 OP2 U B2830 19.551 49.712 87.557 1.00 85.93 O
ATOM 27 O5' U B2830 21.801 50.748 87.262 1.00 86.05 O
TER
ATOM 2 P U A1399 30.642 45.767 91.014 1.00 70.73 P
ATOM 3 OP1 U A1399 32.034 45.443 90.596 1.00 70.47 O
ATOM 4 OP2 U A1399 30.398 46.319 92.391 1.00 71.18 O
ATOM 5 O5' U A1399 29.978 46.711 89.911 1.00 70.92 O
ATOM 6 C5' U A1399 30.294 46.543 88.534 1.00 70.62 C
ATOM 7 C4' U A1399 30.079 47.806 87.750 1.00 70.97 C
ATOM 8 O4' U A1399 28.719 48.271 87.953 1.00 71.26 O
ATOM 9 C3' U A1399 30.991 48.964 88.133 1.00 71.41 C
ATOM 10 O3' U A1399 31.348 49.686 86.969 1.00 71.48 O
ATOM 11 C2' U A1399 30.104 49.821 89.009 1.00 71.92 C
ATOM 12 O2' U A1399 30.469 51.177 89.054 1.00 72.43 O
ATOM 13 C1' U A1399 28.750 49.619 88.347 1.00 71.83 C
ATOM 14 N1 U A1399 27.629 49.876 89.232 1.00 72.14 N
ATOM 15 C2 U A1399 26.937 51.013 88.924 1.00 72.58 C
ATOM 16 O2 U A1399 27.238 51.686 87.974 1.00 72.67 O
ATOM 17 N3 U A1399 25.883 51.338 89.731 1.00 72.92 N
ATOM 18 C4 U A1399 25.487 50.642 90.851 1.00 72.86 C
ATOM 19 O4 U A1399 24.521 51.057 91.506 1.00 73.22 O
ATOM 20 C5 U A1399 26.292 49.457 91.113 1.00 72.39 C
ATOM 21 C6 U A1399 27.327 49.109 90.318 1.00 72.05 C
ATOM 22 P A A1400 32.811 49.493 86.367 1.00 52.59 P
ATOM 23 OP1 A A1400 32.705 49.552 84.894 1.00 52.41 O
ATOM 24 OP2 A A1400 33.382 48.267 86.987 1.00 52.19 O
ATOM 25 O5' A A1400 33.574 50.772 86.911 1.00 53.12 O
TER
ATOM 1 O3' C B2828 24.180 55.802 90.735 1.00 57.11 O
ATOM 2 P A B2829 23.690 55.123 89.390 1.00 54.36 P
ATOM 3 OP1 A B2829 24.516 53.941 89.156 1.00 53.76 O
ATOM 4 OP2 A B2829 23.673 56.193 88.364 1.00 54.65 O
ATOM 5 O5' A B2829 22.214 54.674 89.753 1.00 54.37 O
ATOM 6 C5' A B2829 22.003 53.673 90.722 1.00 54.14 C
ATOM 7 C4' A B2829 20.568 53.233 90.763 1.00 54.11 C
ATOM 8 O4' A B2829 19.747 54.292 91.278 1.00 54.72 O
ATOM 9 C3' A B2829 19.942 52.865 89.432 1.00 53.82 C
ATOM 10 O3' A B2829 20.257 51.507 89.064 1.00 53.19 O
ATOM 11 C2' A B2829 18.450 53.105 89.694 1.00 54.12 C
ATOM 12 O2' A B2829 17.867 51.961 90.327 1.00 53.83 O
ATOM 13 C1' A B2829 18.469 54.240 90.716 1.00 54.75 C
ATOM 14 N9 A B2829 18.139 55.578 90.161 1.00 55.25 N
ATOM 15 C8 A B2829 19.011 56.486 89.628 1.00 55.45 C
ATOM 16 N7 A B2829 18.495 57.653 89.273 1.00 55.96 N
ATOM 17 C5 A B2829 17.181 57.544 89.641 1.00 56.12 C
ATOM 18 C6 A B2829 16.125 58.474 89.544 1.00 56.64 C
ATOM 19 N6 A B2829 16.226 59.684 89.015 1.00 57.09 N
ATOM 20 N1 A B2829 14.931 58.106 90.031 1.00 56.72 N
ATOM 21 C2 A B2829 14.851 56.864 90.551 1.00 56.27 C
ATOM 22 N3 A B2829 15.778 55.887 90.691 1.00 55.75 N
ATOM 23 C4 A B2829 16.956 56.296 90.213 1.00 55.70 C
ATOM 24 P U B2830 20.256 50.989 87.547 1.00 86.34 P
ATOM 25 OP1 U B2830 19.749 52.060 86.696 1.00 86.70 O
ATOM 26 OP2 U B2830 19.551 49.712 87.557 1.00 85.93 O
ATOM 27 O5' U B2830 21.801 50.748 87.262 1.00 86.05 O
TER
Atoms:
C4: (25.487,50.642,90.851)
N3: (25.883,51.338,89.731)
OP1: (32.034,45.443,90.596)
OP2: (30.398,46.319,92.391)
C2: (26.937,51.013,88.924)
C1': (28.750,49.619,88.347)
C3': (30.991,48.964,88.133)
O5': (29.978,46.711,89.911)
O4': (28.719,48.271,87.953)
C5': (30.294,46.543,88.534)
P: (30.642,45.767,91.014)
C4': (30.079,47.806,87.750)
C2': (30.104,49.821,89.009)
O2': (30.469,51.177,89.054)
N1: (27.629,49.876,89.232)
O4: (24.521,51.057,91.506)
O2: (27.238,51.686,87.974)
C6: (27.327,49.109,90.318)
C5: (26.292,49.457,91.113)
O3': (31.348,49.686,86.969)
N3: (25.883,51.338,89.731)
OP1: (32.034,45.443,90.596)
OP2: (30.398,46.319,92.391)
C2: (26.937,51.013,88.924)
C1': (28.750,49.619,88.347)
C3': (30.991,48.964,88.133)
O5': (29.978,46.711,89.911)
O4': (28.719,48.271,87.953)
C5': (30.294,46.543,88.534)
P: (30.642,45.767,91.014)
C4': (30.079,47.806,87.750)
C2': (30.104,49.821,89.009)
O2': (30.469,51.177,89.054)
N1: (27.629,49.876,89.232)
O4: (24.521,51.057,91.506)
O2: (27.238,51.686,87.974)
C6: (27.327,49.109,90.318)
C5: (26.292,49.457,91.113)
O3': (31.348,49.686,86.969)
OP1: (24.516,53.941,89.156)
OP2: (23.673,56.193,88.364)
C3': (19.942,52.865,89.432)
C1': (18.469,54.240,90.716)
C5': (22.003,53.673,90.722)
O4': (19.747,54.292,91.278)
C8: (19.011,56.486,89.628)
O2': (17.867,51.961,90.327)
C6: (16.125,58.474,89.544)
C5: (17.181,57.544,89.641)
C4: (16.956,56.296,90.213)
P: (23.690,55.123,89.390)
C4': (20.568,53.233,90.763)
C2': (18.450,53.105,89.694)
C2: (14.851,56.864,90.551)
N1: (14.931,58.106,90.031)
N3: (15.778,55.887,90.691)
N6: (16.226,59.684,89.015)
N7: (18.495,57.653,89.273)
N9: (18.139,55.578,90.161)
O5': (22.214,54.674,89.753)
O3': (20.257,51.507,89.064)
OP2: (23.673,56.193,88.364)
C3': (19.942,52.865,89.432)
C1': (18.469,54.240,90.716)
C5': (22.003,53.673,90.722)
O4': (19.747,54.292,91.278)
C8: (19.011,56.486,89.628)
O2': (17.867,51.961,90.327)
C6: (16.125,58.474,89.544)
C5: (17.181,57.544,89.641)
C4: (16.956,56.296,90.213)
P: (23.690,55.123,89.390)
C4': (20.568,53.233,90.763)
C2': (18.450,53.105,89.694)
C2: (14.851,56.864,90.551)
N1: (14.931,58.106,90.031)
N3: (15.778,55.887,90.691)
N6: (16.226,59.684,89.015)
N7: (18.495,57.653,89.273)
N9: (18.139,55.578,90.161)
O5': (22.214,54.674,89.753)
O3': (20.257,51.507,89.064)
Image (generated by PyMOL):