ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ8:0988:01233

Extra

PDB:
ATOM 1 O3' U A 987 19.180 71.557 71.271 1.00 63.77 O
ATOM 2 P U A 988 17.639 71.899 70.954 1.00 66.31 P
ATOM 3 OP1 U A 988 16.907 72.178 72.215 1.00 66.77 O
ATOM 4 OP2 U A 988 17.165 70.819 70.047 1.00 67.68 O
ATOM 5 O5' U A 988 17.688 73.254 70.111 1.00 67.21 O
ATOM 6 C5' U A 988 17.903 74.526 70.761 1.00 67.07 C
ATOM 7 C4' U A 988 17.494 75.672 69.852 1.00 66.12 C
ATOM 8 O4' U A 988 16.171 75.419 69.293 1.00 67.40 O
ATOM 9 C3' U A 988 17.385 77.015 70.567 1.00 65.26 C
ATOM 10 O3' U A 988 17.621 78.081 69.643 1.00 62.46 O
ATOM 11 C2' U A 988 15.915 77.030 70.970 1.00 66.16 C
ATOM 12 O2' U A 988 15.420 78.319 71.262 1.00 65.77 O
ATOM 13 C1' U A 988 15.276 76.435 69.714 1.00 67.89 C
ATOM 14 N1 U A 988 13.932 75.853 69.888 1.00 69.85 N
ATOM 15 C2 U A 988 12.832 76.659 69.601 1.00 70.45 C
ATOM 16 O2 U A 988 12.929 77.814 69.213 1.00 70.22 O
ATOM 17 N3 U A 988 11.609 76.059 69.783 1.00 72.00 N
ATOM 18 C4 U A 988 11.367 74.763 70.207 1.00 72.72 C
ATOM 19 O4 U A 988 10.202 74.369 70.319 1.00 72.79 O
ATOM 20 C5 U A 988 12.548 73.992 70.479 1.00 72.35 C
ATOM 21 C6 U A 988 13.759 74.548 70.317 1.00 71.10 C
ATOM 22 P U A 989 19.026 78.872 69.652 1.00 61.04 P
ATOM 23 OP1 U A 989 18.743 80.282 69.250 1.00 60.42 O
ATOM 24 OP2 U A 989 19.991 78.056 68.857 1.00 60.39 O
ATOM 25 O5' U A 989 19.519 78.858 71.169 1.00 57.89 O
TER

ATOM 1 O3' C B1232 9.969 79.091 70.943 1.00 50.26 O
ATOM 2 P A B1233 9.516 79.227 69.413 1.00 51.14 P
ATOM 3 OP1 A B1233 9.509 77.854 68.848 1.00 52.87 O
ATOM 4 OP2 A B1233 10.340 80.280 68.763 1.00 52.90 O
ATOM 5 O5' A B1233 8.019 79.757 69.529 1.00 49.78 O
ATOM 6 C5' A B1233 7.000 78.938 70.129 1.00 47.56 C
ATOM 7 C4' A B1233 5.660 79.636 70.075 1.00 47.48 C
ATOM 8 O4' A B1233 5.644 80.780 70.966 1.00 48.08 O
ATOM 9 C3' A B1233 5.262 80.224 68.734 1.00 47.02 C
ATOM 10 O3' A B1233 4.774 79.222 67.858 1.00 47.31 O
ATOM 11 C2' A B1233 4.190 81.227 69.144 1.00 47.90 C
ATOM 12 O2' A B1233 2.956 80.618 69.465 1.00 48.34 O
ATOM 13 C1' A B1233 4.793 81.789 70.432 1.00 47.34 C
ATOM 14 N9 A B1233 5.591 82.996 70.205 1.00 47.27 N
ATOM 15 C8 A B1233 6.955 83.084 70.019 1.00 46.47 C
ATOM 16 N7 A B1233 7.388 84.309 69.849 1.00 46.59 N
ATOM 17 C5 A B1233 6.236 85.084 69.923 1.00 46.49 C
ATOM 18 C6 A B1233 6.023 86.469 69.817 1.00 46.18 C
ATOM 19 N6 A B1233 7.001 87.349 69.599 1.00 46.40 N
ATOM 20 N1 A B1233 4.755 86.923 69.936 1.00 46.72 N
ATOM 21 C2 A B1233 3.772 86.031 70.143 1.00 46.89 C
ATOM 22 N3 A B1233 3.847 84.703 70.259 1.00 46.50 N
ATOM 23 C4 A B1233 5.122 84.288 70.139 1.00 46.40 C
ATOM 24 P C B1234 5.045 79.345 66.282 1.00 47.30 P
ATOM 25 OP1 C B1234 4.391 78.170 65.635 1.00 48.07 O
ATOM 26 OP2 C B1234 6.500 79.584 66.071 1.00 46.75 O
ATOM 27 O5' C B1234 4.231 80.651 65.872 1.00 44.45 O
TER

Atoms:
C4: (11.367,74.763,70.207)
N3: (11.609,76.059,69.783)
OP1: (16.907,72.178,72.215)
OP2: (17.165,70.819,70.047)
C2: (12.832,76.659,69.601)
C1': (15.276,76.435,69.714)
C3': (17.385,77.015,70.567)
O5': (17.688,73.254,70.111)
O4': (16.171,75.419,69.293)
C5': (17.903,74.526,70.761)
P: (17.639,71.899,70.954)
C4': (17.494,75.672,69.852)
C2': (15.915,77.030,70.970)
O2': (15.420,78.319,71.262)
N1: (13.932,75.853,69.888)
O4: (10.202,74.369,70.319)
O2: (12.929,77.814,69.213)
C6: (13.759,74.548,70.317)
C5: (12.548,73.992,70.479)
O3': (17.621,78.081,69.643)
OP1: (9.509,77.854,68.848)
OP2: (10.340,80.280,68.763)
C3': (5.262,80.224,68.734)
C1': (4.793,81.789,70.432)
C5': (7.000,78.938,70.129)
O4': (5.644,80.780,70.966)
C8: (6.955,83.084,70.019)
O2': (2.956,80.618,69.465)
C6: (6.023,86.469,69.817)
C5: (6.236,85.084,69.923)
C4: (5.122,84.288,70.139)
P: (9.516,79.227,69.413)
C4': (5.660,79.636,70.075)
C2': (4.190,81.227,69.144)
C2: (3.772,86.031,70.143)
N1: (4.755,86.923,69.936)
N3: (3.847,84.703,70.259)
N6: (7.001,87.349,69.599)
N7: (7.388,84.309,69.849)
N9: (5.591,82.996,70.205)
O5': (8.019,79.757,69.529)
O3': (4.774,79.222,67.858)
Image (generated by PyMOL):
PyMOL image
show in jmol