Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0988:01233
Extra
PDB:
ATOM 1 O3' U A 987 19.249 72.677 71.504 1.00 58.50 O
ATOM 2 P U A 988 17.720 73.137 71.326 1.00 60.40 P
ATOM 3 OP1 U A 988 17.185 73.651 72.616 1.00 58.99 O
ATOM 4 OP2 U A 988 17.028 72.028 70.635 1.00 63.44 O
ATOM 5 O5' U A 988 17.811 74.356 70.309 1.00 60.77 O
ATOM 6 C5' U A 988 18.329 75.615 70.746 1.00 59.63 C
ATOM 7 C4' U A 988 17.785 76.740 69.900 1.00 58.75 C
ATOM 8 O4' U A 988 16.472 76.404 69.364 1.00 58.71 O
ATOM 9 C3' U A 988 17.601 78.024 70.697 1.00 58.26 C
ATOM 10 O3' U A 988 17.821 79.155 69.866 1.00 55.86 O
ATOM 11 C2' U A 988 16.133 77.933 71.098 1.00 59.27 C
ATOM 12 O2' U A 988 15.564 79.171 71.462 1.00 59.93 O
ATOM 13 C1' U A 988 15.520 77.346 69.825 1.00 60.09 C
ATOM 14 N1 U A 988 14.224 76.668 70.011 1.00 62.32 N
ATOM 15 C2 U A 988 13.065 77.432 69.885 1.00 63.64 C
ATOM 16 O2 U A 988 13.070 78.623 69.614 1.00 63.84 O
ATOM 17 N3 U A 988 11.895 76.747 70.090 1.00 65.28 N
ATOM 18 C4 U A 988 11.755 75.408 70.400 1.00 66.25 C
ATOM 19 O4 U A 988 10.628 74.956 70.623 1.00 68.20 O
ATOM 20 C5 U A 988 12.989 74.683 70.497 1.00 64.01 C
ATOM 21 C6 U A 988 14.149 75.319 70.305 1.00 62.91 C
ATOM 22 P U A 989 19.271 79.842 69.826 1.00 53.73 P
ATOM 23 OP1 U A 989 19.071 81.248 69.392 1.00 55.28 O
ATOM 24 OP2 U A 989 20.169 78.950 69.045 1.00 52.38 O
ATOM 25 O5' U A 989 19.762 79.838 71.341 1.00 51.07 O
TER
ATOM 1 O3' C B1232 10.253 79.591 71.239 1.00 50.59 O
ATOM 2 P A B1233 9.722 79.670 69.730 1.00 53.20 P
ATOM 3 OP1 A B1233 9.641 78.265 69.259 1.00 52.44 O
ATOM 4 OP2 A B1233 10.534 80.651 68.969 1.00 52.67 O
ATOM 5 O5' A B1233 8.253 80.275 69.878 1.00 51.13 O
ATOM 6 C5' A B1233 7.203 79.508 70.490 1.00 47.63 C
ATOM 7 C4' A B1233 5.889 80.244 70.417 1.00 47.30 C
ATOM 8 O4' A B1233 5.903 81.388 71.307 1.00 48.44 O
ATOM 9 C3' A B1233 5.515 80.851 69.079 1.00 48.47 C
ATOM 10 O3' A B1233 5.042 79.892 68.150 1.00 48.80 O
ATOM 11 C2' A B1233 4.459 81.868 69.487 1.00 48.17 C
ATOM 12 O2' A B1233 3.220 81.272 69.798 1.00 46.46 O
ATOM 13 C1' A B1233 5.071 82.414 70.778 1.00 48.78 C
ATOM 14 N9 A B1233 5.887 83.614 70.557 1.00 49.67 N
ATOM 15 C8 A B1233 7.247 83.694 70.364 1.00 49.90 C
ATOM 16 N7 A B1233 7.686 84.917 70.186 1.00 50.17 N
ATOM 17 C5 A B1233 6.540 85.697 70.265 1.00 49.20 C
ATOM 18 C6 A B1233 6.331 87.080 70.153 1.00 49.29 C
ATOM 19 N6 A B1233 7.305 87.958 69.914 1.00 49.62 N
ATOM 20 N1 A B1233 5.069 87.538 70.288 1.00 50.06 N
ATOM 21 C2 A B1233 4.090 86.656 70.510 1.00 49.55 C
ATOM 22 N3 A B1233 4.158 85.333 70.629 1.00 49.16 N
ATOM 23 C4 A B1233 5.426 84.910 70.497 1.00 49.38 C
ATOM 24 P C B1234 5.445 80.036 66.604 1.00 50.98 P
ATOM 25 OP1 C B1234 4.940 78.845 65.884 1.00 51.30 O
ATOM 26 OP2 C B1234 6.893 80.376 66.531 1.00 52.13 O
ATOM 27 O5' C B1234 4.614 81.302 66.116 1.00 49.93 O
TER
ATOM 2 P U A 988 17.720 73.137 71.326 1.00 60.40 P
ATOM 3 OP1 U A 988 17.185 73.651 72.616 1.00 58.99 O
ATOM 4 OP2 U A 988 17.028 72.028 70.635 1.00 63.44 O
ATOM 5 O5' U A 988 17.811 74.356 70.309 1.00 60.77 O
ATOM 6 C5' U A 988 18.329 75.615 70.746 1.00 59.63 C
ATOM 7 C4' U A 988 17.785 76.740 69.900 1.00 58.75 C
ATOM 8 O4' U A 988 16.472 76.404 69.364 1.00 58.71 O
ATOM 9 C3' U A 988 17.601 78.024 70.697 1.00 58.26 C
ATOM 10 O3' U A 988 17.821 79.155 69.866 1.00 55.86 O
ATOM 11 C2' U A 988 16.133 77.933 71.098 1.00 59.27 C
ATOM 12 O2' U A 988 15.564 79.171 71.462 1.00 59.93 O
ATOM 13 C1' U A 988 15.520 77.346 69.825 1.00 60.09 C
ATOM 14 N1 U A 988 14.224 76.668 70.011 1.00 62.32 N
ATOM 15 C2 U A 988 13.065 77.432 69.885 1.00 63.64 C
ATOM 16 O2 U A 988 13.070 78.623 69.614 1.00 63.84 O
ATOM 17 N3 U A 988 11.895 76.747 70.090 1.00 65.28 N
ATOM 18 C4 U A 988 11.755 75.408 70.400 1.00 66.25 C
ATOM 19 O4 U A 988 10.628 74.956 70.623 1.00 68.20 O
ATOM 20 C5 U A 988 12.989 74.683 70.497 1.00 64.01 C
ATOM 21 C6 U A 988 14.149 75.319 70.305 1.00 62.91 C
ATOM 22 P U A 989 19.271 79.842 69.826 1.00 53.73 P
ATOM 23 OP1 U A 989 19.071 81.248 69.392 1.00 55.28 O
ATOM 24 OP2 U A 989 20.169 78.950 69.045 1.00 52.38 O
ATOM 25 O5' U A 989 19.762 79.838 71.341 1.00 51.07 O
TER
ATOM 1 O3' C B1232 10.253 79.591 71.239 1.00 50.59 O
ATOM 2 P A B1233 9.722 79.670 69.730 1.00 53.20 P
ATOM 3 OP1 A B1233 9.641 78.265 69.259 1.00 52.44 O
ATOM 4 OP2 A B1233 10.534 80.651 68.969 1.00 52.67 O
ATOM 5 O5' A B1233 8.253 80.275 69.878 1.00 51.13 O
ATOM 6 C5' A B1233 7.203 79.508 70.490 1.00 47.63 C
ATOM 7 C4' A B1233 5.889 80.244 70.417 1.00 47.30 C
ATOM 8 O4' A B1233 5.903 81.388 71.307 1.00 48.44 O
ATOM 9 C3' A B1233 5.515 80.851 69.079 1.00 48.47 C
ATOM 10 O3' A B1233 5.042 79.892 68.150 1.00 48.80 O
ATOM 11 C2' A B1233 4.459 81.868 69.487 1.00 48.17 C
ATOM 12 O2' A B1233 3.220 81.272 69.798 1.00 46.46 O
ATOM 13 C1' A B1233 5.071 82.414 70.778 1.00 48.78 C
ATOM 14 N9 A B1233 5.887 83.614 70.557 1.00 49.67 N
ATOM 15 C8 A B1233 7.247 83.694 70.364 1.00 49.90 C
ATOM 16 N7 A B1233 7.686 84.917 70.186 1.00 50.17 N
ATOM 17 C5 A B1233 6.540 85.697 70.265 1.00 49.20 C
ATOM 18 C6 A B1233 6.331 87.080 70.153 1.00 49.29 C
ATOM 19 N6 A B1233 7.305 87.958 69.914 1.00 49.62 N
ATOM 20 N1 A B1233 5.069 87.538 70.288 1.00 50.06 N
ATOM 21 C2 A B1233 4.090 86.656 70.510 1.00 49.55 C
ATOM 22 N3 A B1233 4.158 85.333 70.629 1.00 49.16 N
ATOM 23 C4 A B1233 5.426 84.910 70.497 1.00 49.38 C
ATOM 24 P C B1234 5.445 80.036 66.604 1.00 50.98 P
ATOM 25 OP1 C B1234 4.940 78.845 65.884 1.00 51.30 O
ATOM 26 OP2 C B1234 6.893 80.376 66.531 1.00 52.13 O
ATOM 27 O5' C B1234 4.614 81.302 66.116 1.00 49.93 O
TER
Atoms:
C4: (11.755,75.408,70.400)
N3: (11.895,76.747,70.090)
OP1: (17.185,73.651,72.616)
OP2: (17.028,72.028,70.635)
C2: (13.065,77.432,69.885)
C1': (15.520,77.346,69.825)
C3': (17.601,78.024,70.697)
O5': (17.811,74.356,70.309)
O4': (16.472,76.404,69.364)
C5': (18.329,75.615,70.746)
P: (17.720,73.137,71.326)
C4': (17.785,76.740,69.900)
C2': (16.133,77.933,71.098)
O2': (15.564,79.171,71.462)
N1: (14.224,76.668,70.011)
O4: (10.628,74.956,70.623)
O2: (13.070,78.623,69.614)
C6: (14.149,75.319,70.305)
C5: (12.989,74.683,70.497)
O3': (17.821,79.155,69.866)
N3: (11.895,76.747,70.090)
OP1: (17.185,73.651,72.616)
OP2: (17.028,72.028,70.635)
C2: (13.065,77.432,69.885)
C1': (15.520,77.346,69.825)
C3': (17.601,78.024,70.697)
O5': (17.811,74.356,70.309)
O4': (16.472,76.404,69.364)
C5': (18.329,75.615,70.746)
P: (17.720,73.137,71.326)
C4': (17.785,76.740,69.900)
C2': (16.133,77.933,71.098)
O2': (15.564,79.171,71.462)
N1: (14.224,76.668,70.011)
O4: (10.628,74.956,70.623)
O2: (13.070,78.623,69.614)
C6: (14.149,75.319,70.305)
C5: (12.989,74.683,70.497)
O3': (17.821,79.155,69.866)
OP1: (9.641,78.265,69.259)
OP2: (10.534,80.651,68.969)
C3': (5.515,80.851,69.079)
C1': (5.071,82.414,70.778)
C5': (7.203,79.508,70.490)
O4': (5.903,81.388,71.307)
C8: (7.247,83.694,70.364)
O2': (3.220,81.272,69.798)
C6: (6.331,87.080,70.153)
C5: (6.540,85.697,70.265)
C4: (5.426,84.910,70.497)
P: (9.722,79.670,69.730)
C4': (5.889,80.244,70.417)
C2': (4.459,81.868,69.487)
C2: (4.090,86.656,70.510)
N1: (5.069,87.538,70.288)
N3: (4.158,85.333,70.629)
N6: (7.305,87.958,69.914)
N7: (7.686,84.917,70.186)
N9: (5.887,83.614,70.557)
O5': (8.253,80.275,69.878)
O3': (5.042,79.892,68.150)
OP2: (10.534,80.651,68.969)
C3': (5.515,80.851,69.079)
C1': (5.071,82.414,70.778)
C5': (7.203,79.508,70.490)
O4': (5.903,81.388,71.307)
C8: (7.247,83.694,70.364)
O2': (3.220,81.272,69.798)
C6: (6.331,87.080,70.153)
C5: (6.540,85.697,70.265)
C4: (5.426,84.910,70.497)
P: (9.722,79.670,69.730)
C4': (5.889,80.244,70.417)
C2': (4.459,81.868,69.487)
C2: (4.090,86.656,70.510)
N1: (5.069,87.538,70.288)
N3: (4.158,85.333,70.629)
N6: (7.305,87.958,69.914)
N7: (7.686,84.917,70.186)
N9: (5.887,83.614,70.557)
O5': (8.253,80.275,69.878)
O3': (5.042,79.892,68.150)
Image (generated by PyMOL):