Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1J1U:B55:B58
Extra
PDB:
ATOM 1 O3' U A 54 -26.774 47.276 83.316 1.00 44.79 O
ATOM 2 P U A 55 -27.742 47.902 84.435 1.00 42.51 P
ATOM 3 OP1 U A 55 -29.060 47.968 83.751 1.00 57.32 O
ATOM 4 OP2 U A 55 -27.210 49.115 85.079 1.00 41.33 O
ATOM 5 O5' U A 55 -27.876 46.775 85.552 1.00 38.49 O
ATOM 6 C5' U A 55 -28.355 45.500 85.227 1.00 39.38 C
ATOM 7 C4' U A 55 -28.120 44.543 86.388 1.00 46.74 C
ATOM 8 O4' U A 55 -26.697 44.304 86.496 1.00 47.81 O
ATOM 9 C3' U A 55 -28.477 45.001 87.792 1.00 48.48 C
ATOM 10 O3' U A 55 -29.872 44.893 88.085 1.00 45.33 O
ATOM 11 C2' U A 55 -27.649 44.048 88.654 1.00 38.75 C
ATOM 12 O2' U A 55 -28.179 42.726 88.685 1.00 38.00 O
ATOM 13 C1' U A 55 -26.344 43.983 87.832 1.00 43.73 C
ATOM 14 N1 U A 55 -25.306 44.940 88.255 1.00 33.17 N
ATOM 15 C2 U A 55 -24.403 44.518 89.190 1.00 37.14 C
ATOM 16 O2 U A 55 -24.404 43.366 89.617 1.00 35.61 O
ATOM 17 N3 U A 55 -23.485 45.476 89.586 1.00 29.57 N
ATOM 18 C4 U A 55 -23.379 46.762 89.115 1.00 36.94 C
ATOM 19 O4 U A 55 -22.530 47.521 89.597 1.00 40.99 O
ATOM 20 C5 U A 55 -24.345 47.116 88.111 1.00 44.36 C
ATOM 21 C6 U A 55 -25.253 46.219 87.731 1.00 32.42 C
ATOM 22 P C A 56 -30.555 46.055 88.946 1.00 49.08 P
ATOM 23 OP1 C A 56 -31.990 45.727 88.887 1.00 63.38 O
ATOM 24 OP2 C A 56 -30.099 47.456 88.638 1.00 47.08 O
ATOM 25 O5' C A 56 -30.030 45.839 90.433 1.00 47.14 O
TER
ATOM 1 O3' A B 57 -22.148 43.827 93.687 1.00 39.45 O
ATOM 2 P A B 58 -21.017 44.074 92.556 1.00 37.50 P
ATOM 3 OP1 A B 58 -19.986 44.951 93.210 1.00 48.01 O
ATOM 4 OP2 A B 58 -21.572 44.481 91.239 1.00 37.58 O
ATOM 5 O5' A B 58 -20.508 42.571 92.297 1.00 28.75 O
ATOM 6 C5' A B 58 -19.919 41.701 93.291 1.00 32.99 C
ATOM 7 C4' A B 58 -18.867 40.806 92.554 1.00 31.88 C
ATOM 8 O4' A B 58 -19.393 40.261 91.299 1.00 34.24 O
ATOM 9 C3' A B 58 -17.671 41.654 92.131 1.00 30.63 C
ATOM 10 O3' A B 58 -16.533 40.777 92.113 1.00 29.89 O
ATOM 11 C2' A B 58 -17.913 41.984 90.676 1.00 28.03 C
ATOM 12 O2' A B 58 -16.832 42.313 89.850 1.00 32.18 O
ATOM 13 C1' A B 58 -18.698 40.770 90.203 1.00 28.12 C
ATOM 14 N9 A B 58 -19.615 41.043 89.092 1.00 26.02 N
ATOM 15 C8 A B 58 -20.122 42.260 88.650 1.00 32.13 C
ATOM 16 N7 A B 58 -20.918 42.147 87.614 1.00 39.81 N
ATOM 17 C5 A B 58 -20.935 40.756 87.372 1.00 27.85 C
ATOM 18 C6 A B 58 -21.625 39.974 86.432 1.00 36.33 C
ATOM 19 N6 A B 58 -22.456 40.517 85.480 1.00 36.92 N
ATOM 20 N1 A B 58 -21.446 38.648 86.474 1.00 27.03 N
ATOM 21 C2 A B 58 -20.644 38.137 87.406 1.00 31.36 C
ATOM 22 N3 A B 58 -19.936 38.773 88.358 1.00 28.42 N
ATOM 23 C4 A B 58 -20.135 40.089 88.273 1.00 29.74 C
ATOM 24 P A B 59 -15.641 40.608 93.416 1.00 33.88 P
ATOM 25 OP1 A B 59 -16.345 39.893 94.463 1.00 34.67 O
ATOM 26 OP2 A B 59 -15.130 41.917 93.657 1.00 29.42 O
ATOM 27 O5' A B 59 -14.439 39.646 92.891 1.00 33.13 O
TER
ATOM 2 P U A 55 -27.742 47.902 84.435 1.00 42.51 P
ATOM 3 OP1 U A 55 -29.060 47.968 83.751 1.00 57.32 O
ATOM 4 OP2 U A 55 -27.210 49.115 85.079 1.00 41.33 O
ATOM 5 O5' U A 55 -27.876 46.775 85.552 1.00 38.49 O
ATOM 6 C5' U A 55 -28.355 45.500 85.227 1.00 39.38 C
ATOM 7 C4' U A 55 -28.120 44.543 86.388 1.00 46.74 C
ATOM 8 O4' U A 55 -26.697 44.304 86.496 1.00 47.81 O
ATOM 9 C3' U A 55 -28.477 45.001 87.792 1.00 48.48 C
ATOM 10 O3' U A 55 -29.872 44.893 88.085 1.00 45.33 O
ATOM 11 C2' U A 55 -27.649 44.048 88.654 1.00 38.75 C
ATOM 12 O2' U A 55 -28.179 42.726 88.685 1.00 38.00 O
ATOM 13 C1' U A 55 -26.344 43.983 87.832 1.00 43.73 C
ATOM 14 N1 U A 55 -25.306 44.940 88.255 1.00 33.17 N
ATOM 15 C2 U A 55 -24.403 44.518 89.190 1.00 37.14 C
ATOM 16 O2 U A 55 -24.404 43.366 89.617 1.00 35.61 O
ATOM 17 N3 U A 55 -23.485 45.476 89.586 1.00 29.57 N
ATOM 18 C4 U A 55 -23.379 46.762 89.115 1.00 36.94 C
ATOM 19 O4 U A 55 -22.530 47.521 89.597 1.00 40.99 O
ATOM 20 C5 U A 55 -24.345 47.116 88.111 1.00 44.36 C
ATOM 21 C6 U A 55 -25.253 46.219 87.731 1.00 32.42 C
ATOM 22 P C A 56 -30.555 46.055 88.946 1.00 49.08 P
ATOM 23 OP1 C A 56 -31.990 45.727 88.887 1.00 63.38 O
ATOM 24 OP2 C A 56 -30.099 47.456 88.638 1.00 47.08 O
ATOM 25 O5' C A 56 -30.030 45.839 90.433 1.00 47.14 O
TER
ATOM 1 O3' A B 57 -22.148 43.827 93.687 1.00 39.45 O
ATOM 2 P A B 58 -21.017 44.074 92.556 1.00 37.50 P
ATOM 3 OP1 A B 58 -19.986 44.951 93.210 1.00 48.01 O
ATOM 4 OP2 A B 58 -21.572 44.481 91.239 1.00 37.58 O
ATOM 5 O5' A B 58 -20.508 42.571 92.297 1.00 28.75 O
ATOM 6 C5' A B 58 -19.919 41.701 93.291 1.00 32.99 C
ATOM 7 C4' A B 58 -18.867 40.806 92.554 1.00 31.88 C
ATOM 8 O4' A B 58 -19.393 40.261 91.299 1.00 34.24 O
ATOM 9 C3' A B 58 -17.671 41.654 92.131 1.00 30.63 C
ATOM 10 O3' A B 58 -16.533 40.777 92.113 1.00 29.89 O
ATOM 11 C2' A B 58 -17.913 41.984 90.676 1.00 28.03 C
ATOM 12 O2' A B 58 -16.832 42.313 89.850 1.00 32.18 O
ATOM 13 C1' A B 58 -18.698 40.770 90.203 1.00 28.12 C
ATOM 14 N9 A B 58 -19.615 41.043 89.092 1.00 26.02 N
ATOM 15 C8 A B 58 -20.122 42.260 88.650 1.00 32.13 C
ATOM 16 N7 A B 58 -20.918 42.147 87.614 1.00 39.81 N
ATOM 17 C5 A B 58 -20.935 40.756 87.372 1.00 27.85 C
ATOM 18 C6 A B 58 -21.625 39.974 86.432 1.00 36.33 C
ATOM 19 N6 A B 58 -22.456 40.517 85.480 1.00 36.92 N
ATOM 20 N1 A B 58 -21.446 38.648 86.474 1.00 27.03 N
ATOM 21 C2 A B 58 -20.644 38.137 87.406 1.00 31.36 C
ATOM 22 N3 A B 58 -19.936 38.773 88.358 1.00 28.42 N
ATOM 23 C4 A B 58 -20.135 40.089 88.273 1.00 29.74 C
ATOM 24 P A B 59 -15.641 40.608 93.416 1.00 33.88 P
ATOM 25 OP1 A B 59 -16.345 39.893 94.463 1.00 34.67 O
ATOM 26 OP2 A B 59 -15.130 41.917 93.657 1.00 29.42 O
ATOM 27 O5' A B 59 -14.439 39.646 92.891 1.00 33.13 O
TER
Atoms:
C4: (-23.379,46.762,89.115)
N3: (-23.485,45.476,89.586)
OP1: (-29.060,47.968,83.751)
OP2: (-27.210,49.115,85.079)
C2: (-24.403,44.518,89.190)
C1': (-26.344,43.983,87.832)
C3': (-28.477,45.001,87.792)
O5': (-27.876,46.775,85.552)
O4': (-26.697,44.304,86.496)
C5': (-28.355,45.500,85.227)
P: (-27.742,47.902,84.435)
C4': (-28.120,44.543,86.388)
C2': (-27.649,44.048,88.654)
O2': (-28.179,42.726,88.685)
N1: (-25.306,44.940,88.255)
O4: (-22.530,47.521,89.597)
O2: (-24.404,43.366,89.617)
C6: (-25.253,46.219,87.731)
C5: (-24.345,47.116,88.111)
O3': (-29.872,44.893,88.085)
N3: (-23.485,45.476,89.586)
OP1: (-29.060,47.968,83.751)
OP2: (-27.210,49.115,85.079)
C2: (-24.403,44.518,89.190)
C1': (-26.344,43.983,87.832)
C3': (-28.477,45.001,87.792)
O5': (-27.876,46.775,85.552)
O4': (-26.697,44.304,86.496)
C5': (-28.355,45.500,85.227)
P: (-27.742,47.902,84.435)
C4': (-28.120,44.543,86.388)
C2': (-27.649,44.048,88.654)
O2': (-28.179,42.726,88.685)
N1: (-25.306,44.940,88.255)
O4: (-22.530,47.521,89.597)
O2: (-24.404,43.366,89.617)
C6: (-25.253,46.219,87.731)
C5: (-24.345,47.116,88.111)
O3': (-29.872,44.893,88.085)
OP1: (-19.986,44.951,93.210)
OP2: (-21.572,44.481,91.239)
C3': (-17.671,41.654,92.131)
C1': (-18.698,40.770,90.203)
C5': (-19.919,41.701,93.291)
O4': (-19.393,40.261,91.299)
C8: (-20.122,42.260,88.650)
O2': (-16.832,42.313,89.850)
C6: (-21.625,39.974,86.432)
C5: (-20.935,40.756,87.372)
C4: (-20.135,40.089,88.273)
P: (-21.017,44.074,92.556)
C4': (-18.867,40.806,92.554)
C2': (-17.913,41.984,90.676)
C2: (-20.644,38.137,87.406)
N1: (-21.446,38.648,86.474)
N3: (-19.936,38.773,88.358)
N6: (-22.456,40.517,85.480)
N7: (-20.918,42.147,87.614)
N9: (-19.615,41.043,89.092)
O5': (-20.508,42.571,92.297)
O3': (-16.533,40.777,92.113)
OP2: (-21.572,44.481,91.239)
C3': (-17.671,41.654,92.131)
C1': (-18.698,40.770,90.203)
C5': (-19.919,41.701,93.291)
O4': (-19.393,40.261,91.299)
C8: (-20.122,42.260,88.650)
O2': (-16.832,42.313,89.850)
C6: (-21.625,39.974,86.432)
C5: (-20.935,40.756,87.372)
C4: (-20.135,40.089,88.273)
P: (-21.017,44.074,92.556)
C4': (-18.867,40.806,92.554)
C2': (-17.913,41.984,90.676)
C2: (-20.644,38.137,87.406)
N1: (-21.446,38.648,86.474)
N3: (-19.936,38.773,88.358)
N6: (-22.456,40.517,85.480)
N7: (-20.918,42.147,87.614)
N9: (-19.615,41.043,89.092)
O5': (-20.508,42.571,92.297)
O3': (-16.533,40.777,92.113)
Image (generated by PyMOL):