Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0988:01233
Extra
PDB:
ATOM 1 O3' U A 987 19.220 72.683 71.397 1.00 63.50 O
ATOM 2 P U A 988 17.725 73.242 71.257 1.00 66.24 P
ATOM 3 OP1 U A 988 17.293 73.775 72.578 1.00 64.78 O
ATOM 4 OP2 U A 988 16.918 72.198 70.590 1.00 68.59 O
ATOM 5 O5' U A 988 17.867 74.457 70.242 1.00 65.94 O
ATOM 6 C5' U A 988 18.275 75.734 70.723 1.00 66.42 C
ATOM 7 C4' U A 988 17.714 76.832 69.862 1.00 66.30 C
ATOM 8 O4' U A 988 16.426 76.445 69.308 1.00 66.62 O
ATOM 9 C3' U A 988 17.474 78.112 70.649 1.00 66.66 C
ATOM 10 O3' U A 988 17.727 79.240 69.832 1.00 64.25 O
ATOM 11 C2' U A 988 15.996 77.999 71.005 1.00 67.88 C
ATOM 12 O2' U A 988 15.387 79.234 71.313 1.00 67.41 O
ATOM 13 C1' U A 988 15.432 77.359 69.736 1.00 68.20 C
ATOM 14 N1 U A 988 14.174 76.622 69.943 1.00 70.08 N
ATOM 15 C2 U A 988 12.974 77.290 69.708 1.00 70.68 C
ATOM 16 O2 U A 988 12.911 78.447 69.322 1.00 70.03 O
ATOM 17 N3 U A 988 11.847 76.547 69.942 1.00 72.30 N
ATOM 18 C4 U A 988 11.788 75.234 70.373 1.00 73.64 C
ATOM 19 O4 U A 988 10.689 74.717 70.589 1.00 75.53 O
ATOM 20 C5 U A 988 13.062 74.612 70.577 1.00 72.06 C
ATOM 21 C6 U A 988 14.179 75.307 70.363 1.00 70.53 C
ATOM 22 P U A 989 19.206 79.851 69.778 1.00 62.36 P
ATOM 23 OP1 U A 989 19.120 81.261 69.325 1.00 63.77 O
ATOM 24 OP2 U A 989 20.041 78.882 69.021 1.00 62.28 O
ATOM 25 O5' U A 989 19.699 79.828 71.290 1.00 60.24 O
TER
ATOM 1 O3' C B1232 10.292 79.599 71.038 1.00 56.27 O
ATOM 2 P A B1233 9.707 79.737 69.554 1.00 57.53 P
ATOM 3 OP1 A B1233 9.569 78.346 69.062 1.00 59.90 O
ATOM 4 OP2 A B1233 10.528 80.704 68.790 1.00 57.96 O
ATOM 5 O5' A B1233 8.257 80.366 69.765 1.00 55.52 O
ATOM 6 C5' A B1233 7.202 79.579 70.345 1.00 54.42 C
ATOM 7 C4' A B1233 5.872 80.296 70.254 1.00 54.06 C
ATOM 8 O4' A B1233 5.854 81.447 71.136 1.00 53.89 O
ATOM 9 C3' A B1233 5.490 80.881 68.911 1.00 53.90 C
ATOM 10 O3' A B1233 5.039 79.905 67.992 1.00 54.37 O
ATOM 11 C2' A B1233 4.415 81.880 69.310 1.00 53.84 C
ATOM 12 O2' A B1233 3.195 81.260 69.657 1.00 52.00 O
ATOM 13 C1' A B1233 5.030 82.463 70.580 1.00 54.18 C
ATOM 14 N9 A B1233 5.861 83.645 70.317 1.00 55.74 N
ATOM 15 C8 A B1233 7.213 83.694 70.059 1.00 56.09 C
ATOM 16 N7 A B1233 7.673 84.909 69.878 1.00 55.67 N
ATOM 17 C5 A B1233 6.552 85.714 70.023 1.00 54.15 C
ATOM 18 C6 A B1233 6.372 87.102 69.946 1.00 53.52 C
ATOM 19 N6 A B1233 7.355 87.964 69.694 1.00 53.67 N
ATOM 20 N1 A B1233 5.129 87.584 70.136 1.00 53.69 N
ATOM 21 C2 A B1233 4.140 86.724 70.380 1.00 54.07 C
ATOM 22 N3 A B1233 4.180 85.401 70.475 1.00 54.49 N
ATOM 23 C4 A B1233 5.430 84.951 70.286 1.00 54.68 C
ATOM 24 P C B1234 5.395 80.078 66.437 1.00 55.75 P
ATOM 25 OP1 C B1234 4.785 78.948 65.698 1.00 55.69 O
ATOM 26 OP2 C B1234 6.857 80.320 66.328 1.00 57.05 O
ATOM 27 O5' C B1234 4.624 81.408 66.035 1.00 53.09 O
TER
ATOM 2 P U A 988 17.725 73.242 71.257 1.00 66.24 P
ATOM 3 OP1 U A 988 17.293 73.775 72.578 1.00 64.78 O
ATOM 4 OP2 U A 988 16.918 72.198 70.590 1.00 68.59 O
ATOM 5 O5' U A 988 17.867 74.457 70.242 1.00 65.94 O
ATOM 6 C5' U A 988 18.275 75.734 70.723 1.00 66.42 C
ATOM 7 C4' U A 988 17.714 76.832 69.862 1.00 66.30 C
ATOM 8 O4' U A 988 16.426 76.445 69.308 1.00 66.62 O
ATOM 9 C3' U A 988 17.474 78.112 70.649 1.00 66.66 C
ATOM 10 O3' U A 988 17.727 79.240 69.832 1.00 64.25 O
ATOM 11 C2' U A 988 15.996 77.999 71.005 1.00 67.88 C
ATOM 12 O2' U A 988 15.387 79.234 71.313 1.00 67.41 O
ATOM 13 C1' U A 988 15.432 77.359 69.736 1.00 68.20 C
ATOM 14 N1 U A 988 14.174 76.622 69.943 1.00 70.08 N
ATOM 15 C2 U A 988 12.974 77.290 69.708 1.00 70.68 C
ATOM 16 O2 U A 988 12.911 78.447 69.322 1.00 70.03 O
ATOM 17 N3 U A 988 11.847 76.547 69.942 1.00 72.30 N
ATOM 18 C4 U A 988 11.788 75.234 70.373 1.00 73.64 C
ATOM 19 O4 U A 988 10.689 74.717 70.589 1.00 75.53 O
ATOM 20 C5 U A 988 13.062 74.612 70.577 1.00 72.06 C
ATOM 21 C6 U A 988 14.179 75.307 70.363 1.00 70.53 C
ATOM 22 P U A 989 19.206 79.851 69.778 1.00 62.36 P
ATOM 23 OP1 U A 989 19.120 81.261 69.325 1.00 63.77 O
ATOM 24 OP2 U A 989 20.041 78.882 69.021 1.00 62.28 O
ATOM 25 O5' U A 989 19.699 79.828 71.290 1.00 60.24 O
TER
ATOM 1 O3' C B1232 10.292 79.599 71.038 1.00 56.27 O
ATOM 2 P A B1233 9.707 79.737 69.554 1.00 57.53 P
ATOM 3 OP1 A B1233 9.569 78.346 69.062 1.00 59.90 O
ATOM 4 OP2 A B1233 10.528 80.704 68.790 1.00 57.96 O
ATOM 5 O5' A B1233 8.257 80.366 69.765 1.00 55.52 O
ATOM 6 C5' A B1233 7.202 79.579 70.345 1.00 54.42 C
ATOM 7 C4' A B1233 5.872 80.296 70.254 1.00 54.06 C
ATOM 8 O4' A B1233 5.854 81.447 71.136 1.00 53.89 O
ATOM 9 C3' A B1233 5.490 80.881 68.911 1.00 53.90 C
ATOM 10 O3' A B1233 5.039 79.905 67.992 1.00 54.37 O
ATOM 11 C2' A B1233 4.415 81.880 69.310 1.00 53.84 C
ATOM 12 O2' A B1233 3.195 81.260 69.657 1.00 52.00 O
ATOM 13 C1' A B1233 5.030 82.463 70.580 1.00 54.18 C
ATOM 14 N9 A B1233 5.861 83.645 70.317 1.00 55.74 N
ATOM 15 C8 A B1233 7.213 83.694 70.059 1.00 56.09 C
ATOM 16 N7 A B1233 7.673 84.909 69.878 1.00 55.67 N
ATOM 17 C5 A B1233 6.552 85.714 70.023 1.00 54.15 C
ATOM 18 C6 A B1233 6.372 87.102 69.946 1.00 53.52 C
ATOM 19 N6 A B1233 7.355 87.964 69.694 1.00 53.67 N
ATOM 20 N1 A B1233 5.129 87.584 70.136 1.00 53.69 N
ATOM 21 C2 A B1233 4.140 86.724 70.380 1.00 54.07 C
ATOM 22 N3 A B1233 4.180 85.401 70.475 1.00 54.49 N
ATOM 23 C4 A B1233 5.430 84.951 70.286 1.00 54.68 C
ATOM 24 P C B1234 5.395 80.078 66.437 1.00 55.75 P
ATOM 25 OP1 C B1234 4.785 78.948 65.698 1.00 55.69 O
ATOM 26 OP2 C B1234 6.857 80.320 66.328 1.00 57.05 O
ATOM 27 O5' C B1234 4.624 81.408 66.035 1.00 53.09 O
TER
Atoms:
C4: (11.788,75.234,70.373)
N3: (11.847,76.547,69.942)
OP1: (17.293,73.775,72.578)
OP2: (16.918,72.198,70.590)
C2: (12.974,77.290,69.708)
C1': (15.432,77.359,69.736)
C3': (17.474,78.112,70.649)
O5': (17.867,74.457,70.242)
O4': (16.426,76.445,69.308)
C5': (18.275,75.734,70.723)
P: (17.725,73.242,71.257)
C4': (17.714,76.832,69.862)
C2': (15.996,77.999,71.005)
O2': (15.387,79.234,71.313)
N1: (14.174,76.622,69.943)
O4: (10.689,74.717,70.589)
O2: (12.911,78.447,69.322)
C6: (14.179,75.307,70.363)
C5: (13.062,74.612,70.577)
O3': (17.727,79.240,69.832)
N3: (11.847,76.547,69.942)
OP1: (17.293,73.775,72.578)
OP2: (16.918,72.198,70.590)
C2: (12.974,77.290,69.708)
C1': (15.432,77.359,69.736)
C3': (17.474,78.112,70.649)
O5': (17.867,74.457,70.242)
O4': (16.426,76.445,69.308)
C5': (18.275,75.734,70.723)
P: (17.725,73.242,71.257)
C4': (17.714,76.832,69.862)
C2': (15.996,77.999,71.005)
O2': (15.387,79.234,71.313)
N1: (14.174,76.622,69.943)
O4: (10.689,74.717,70.589)
O2: (12.911,78.447,69.322)
C6: (14.179,75.307,70.363)
C5: (13.062,74.612,70.577)
O3': (17.727,79.240,69.832)
OP1: (9.569,78.346,69.062)
OP2: (10.528,80.704,68.790)
C3': (5.490,80.881,68.911)
C1': (5.030,82.463,70.580)
C5': (7.202,79.579,70.345)
O4': (5.854,81.447,71.136)
C8: (7.213,83.694,70.059)
O2': (3.195,81.260,69.657)
C6: (6.372,87.102,69.946)
C5: (6.552,85.714,70.023)
C4: (5.430,84.951,70.286)
P: (9.707,79.737,69.554)
C4': (5.872,80.296,70.254)
C2': (4.415,81.880,69.310)
C2: (4.140,86.724,70.380)
N1: (5.129,87.584,70.136)
N3: (4.180,85.401,70.475)
N6: (7.355,87.964,69.694)
N7: (7.673,84.909,69.878)
N9: (5.861,83.645,70.317)
O5': (8.257,80.366,69.765)
O3': (5.039,79.905,67.992)
OP2: (10.528,80.704,68.790)
C3': (5.490,80.881,68.911)
C1': (5.030,82.463,70.580)
C5': (7.202,79.579,70.345)
O4': (5.854,81.447,71.136)
C8: (7.213,83.694,70.059)
O2': (3.195,81.260,69.657)
C6: (6.372,87.102,69.946)
C5: (6.552,85.714,70.023)
C4: (5.430,84.951,70.286)
P: (9.707,79.737,69.554)
C4': (5.872,80.296,70.254)
C2': (4.415,81.880,69.310)
C2: (4.140,86.724,70.380)
N1: (5.129,87.584,70.136)
N3: (4.180,85.401,70.475)
N6: (7.355,87.964,69.694)
N7: (7.673,84.909,69.878)
N9: (5.861,83.645,70.317)
O5': (8.257,80.366,69.765)
O3': (5.039,79.905,67.992)
Image (generated by PyMOL):