Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01318:02047
Extra
PDB:
ATOM 1 O3' A A1317 49.788 121.287 78.818 1.00 25.31 O
ATOM 2 P U A1318 50.919 122.423 78.730 1.00 27.05 P
ATOM 3 OP1 U A1318 51.301 122.647 77.313 1.00 23.32 O
ATOM 4 OP2 U A1318 51.949 122.010 79.714 1.00 24.86 O
ATOM 5 O5' U A1318 50.219 123.754 79.245 1.00 25.49 O
ATOM 6 C5' U A1318 49.748 123.886 80.594 1.00 28.51 C
ATOM 7 C4' U A1318 50.440 125.046 81.272 1.00 29.46 C
ATOM 8 O4' U A1318 51.787 124.672 81.621 1.00 30.26 O
ATOM 9 C3' U A1318 50.650 126.277 80.409 1.00 29.45 C
ATOM 10 O3' U A1318 49.462 127.049 80.409 1.00 27.60 O
ATOM 11 C2' U A1318 51.789 127.005 81.128 1.00 32.77 C
ATOM 12 O2' U A1318 51.358 127.903 82.134 1.00 35.33 O
ATOM 13 C1' U A1318 52.550 125.845 81.785 1.00 29.46 C
ATOM 14 N1 U A1318 53.927 125.596 81.334 1.00 28.39 N
ATOM 15 C2 U A1318 54.913 126.459 81.793 1.00 28.09 C
ATOM 16 O2 U A1318 54.672 127.432 82.482 1.00 28.79 O
ATOM 17 N3 U A1318 56.188 126.140 81.411 1.00 25.56 N
ATOM 18 C4 U A1318 56.577 125.079 80.627 1.00 28.27 C
ATOM 19 O4 U A1318 57.777 124.886 80.428 1.00 30.23 O
ATOM 20 C5 U A1318 55.503 124.256 80.158 1.00 27.77 C
ATOM 21 C6 U A1318 54.245 124.537 80.515 1.00 27.34 C
ATOM 22 P C A1319 49.110 127.988 79.160 1.00 26.00 P
ATOM 23 OP1 C A1319 50.097 129.079 79.080 1.00 28.85 O
ATOM 24 OP2 C A1319 47.670 128.313 79.288 1.00 21.36 O
ATOM 25 O5' C A1319 49.357 127.071 77.882 1.00 26.82 O
TER
ATOM 1 O3' A B2046 59.932 127.893 84.475 1.00 42.12 O
ATOM 2 P A B2047 58.482 127.449 83.922 1.00 37.27 P
ATOM 3 OP1 A B2047 58.533 127.701 82.459 1.00 38.83 O
ATOM 4 OP2 A B2047 57.402 128.070 84.724 1.00 37.89 O
ATOM 5 O5' A B2047 58.412 125.878 84.199 1.00 39.84 O
ATOM 6 C5' A B2047 59.403 124.969 83.664 1.00 39.33 C
ATOM 7 C4' A B2047 59.405 123.661 84.440 1.00 38.54 C
ATOM 8 O4' A B2047 58.175 122.911 84.175 1.00 37.43 O
ATOM 9 C3' A B2047 60.547 122.706 84.084 1.00 38.24 C
ATOM 10 O3' A B2047 60.948 121.975 85.242 1.00 40.59 O
ATOM 11 C2' A B2047 59.879 121.770 83.088 1.00 37.60 C
ATOM 12 O2' A B2047 60.513 120.524 82.872 1.00 35.44 O
ATOM 13 C1' A B2047 58.515 121.605 83.744 1.00 36.73 C
ATOM 14 N9 A B2047 57.515 121.093 82.810 1.00 36.87 N
ATOM 15 C8 A B2047 56.909 121.723 81.748 1.00 37.09 C
ATOM 16 N7 A B2047 56.122 120.940 81.050 1.00 36.85 N
ATOM 17 C5 A B2047 56.199 119.719 81.707 1.00 36.48 C
ATOM 18 C6 A B2047 55.618 118.464 81.448 1.00 35.18 C
ATOM 19 N6 A B2047 54.840 118.209 80.401 1.00 32.18 N
ATOM 20 N1 A B2047 55.889 117.459 82.309 1.00 35.47 N
ATOM 21 C2 A B2047 56.711 117.696 83.335 1.00 33.76 C
ATOM 22 N3 A B2047 57.336 118.818 83.669 1.00 36.66 N
ATOM 23 C4 A B2047 57.033 119.806 82.806 1.00 36.31 C
ATOM 24 P G B2048 62.479 121.519 85.410 1.00 42.67 P
ATOM 25 OP1 G B2048 63.319 122.738 85.306 1.00 50.66 O
ATOM 26 OP2 G B2048 62.763 120.372 84.521 1.00 42.84 O
ATOM 27 O5' G B2048 62.556 120.992 86.912 1.00 46.12 O
TER
ATOM 2 P U A1318 50.919 122.423 78.730 1.00 27.05 P
ATOM 3 OP1 U A1318 51.301 122.647 77.313 1.00 23.32 O
ATOM 4 OP2 U A1318 51.949 122.010 79.714 1.00 24.86 O
ATOM 5 O5' U A1318 50.219 123.754 79.245 1.00 25.49 O
ATOM 6 C5' U A1318 49.748 123.886 80.594 1.00 28.51 C
ATOM 7 C4' U A1318 50.440 125.046 81.272 1.00 29.46 C
ATOM 8 O4' U A1318 51.787 124.672 81.621 1.00 30.26 O
ATOM 9 C3' U A1318 50.650 126.277 80.409 1.00 29.45 C
ATOM 10 O3' U A1318 49.462 127.049 80.409 1.00 27.60 O
ATOM 11 C2' U A1318 51.789 127.005 81.128 1.00 32.77 C
ATOM 12 O2' U A1318 51.358 127.903 82.134 1.00 35.33 O
ATOM 13 C1' U A1318 52.550 125.845 81.785 1.00 29.46 C
ATOM 14 N1 U A1318 53.927 125.596 81.334 1.00 28.39 N
ATOM 15 C2 U A1318 54.913 126.459 81.793 1.00 28.09 C
ATOM 16 O2 U A1318 54.672 127.432 82.482 1.00 28.79 O
ATOM 17 N3 U A1318 56.188 126.140 81.411 1.00 25.56 N
ATOM 18 C4 U A1318 56.577 125.079 80.627 1.00 28.27 C
ATOM 19 O4 U A1318 57.777 124.886 80.428 1.00 30.23 O
ATOM 20 C5 U A1318 55.503 124.256 80.158 1.00 27.77 C
ATOM 21 C6 U A1318 54.245 124.537 80.515 1.00 27.34 C
ATOM 22 P C A1319 49.110 127.988 79.160 1.00 26.00 P
ATOM 23 OP1 C A1319 50.097 129.079 79.080 1.00 28.85 O
ATOM 24 OP2 C A1319 47.670 128.313 79.288 1.00 21.36 O
ATOM 25 O5' C A1319 49.357 127.071 77.882 1.00 26.82 O
TER
ATOM 1 O3' A B2046 59.932 127.893 84.475 1.00 42.12 O
ATOM 2 P A B2047 58.482 127.449 83.922 1.00 37.27 P
ATOM 3 OP1 A B2047 58.533 127.701 82.459 1.00 38.83 O
ATOM 4 OP2 A B2047 57.402 128.070 84.724 1.00 37.89 O
ATOM 5 O5' A B2047 58.412 125.878 84.199 1.00 39.84 O
ATOM 6 C5' A B2047 59.403 124.969 83.664 1.00 39.33 C
ATOM 7 C4' A B2047 59.405 123.661 84.440 1.00 38.54 C
ATOM 8 O4' A B2047 58.175 122.911 84.175 1.00 37.43 O
ATOM 9 C3' A B2047 60.547 122.706 84.084 1.00 38.24 C
ATOM 10 O3' A B2047 60.948 121.975 85.242 1.00 40.59 O
ATOM 11 C2' A B2047 59.879 121.770 83.088 1.00 37.60 C
ATOM 12 O2' A B2047 60.513 120.524 82.872 1.00 35.44 O
ATOM 13 C1' A B2047 58.515 121.605 83.744 1.00 36.73 C
ATOM 14 N9 A B2047 57.515 121.093 82.810 1.00 36.87 N
ATOM 15 C8 A B2047 56.909 121.723 81.748 1.00 37.09 C
ATOM 16 N7 A B2047 56.122 120.940 81.050 1.00 36.85 N
ATOM 17 C5 A B2047 56.199 119.719 81.707 1.00 36.48 C
ATOM 18 C6 A B2047 55.618 118.464 81.448 1.00 35.18 C
ATOM 19 N6 A B2047 54.840 118.209 80.401 1.00 32.18 N
ATOM 20 N1 A B2047 55.889 117.459 82.309 1.00 35.47 N
ATOM 21 C2 A B2047 56.711 117.696 83.335 1.00 33.76 C
ATOM 22 N3 A B2047 57.336 118.818 83.669 1.00 36.66 N
ATOM 23 C4 A B2047 57.033 119.806 82.806 1.00 36.31 C
ATOM 24 P G B2048 62.479 121.519 85.410 1.00 42.67 P
ATOM 25 OP1 G B2048 63.319 122.738 85.306 1.00 50.66 O
ATOM 26 OP2 G B2048 62.763 120.372 84.521 1.00 42.84 O
ATOM 27 O5' G B2048 62.556 120.992 86.912 1.00 46.12 O
TER
Atoms:
C4: (56.577,125.079,80.627)
N3: (56.188,126.140,81.411)
OP1: (51.301,122.647,77.313)
OP2: (51.949,122.010,79.714)
C2: (54.913,126.459,81.793)
C1': (52.550,125.845,81.785)
C3': (50.650,126.277,80.409)
O5': (50.219,123.754,79.245)
O4': (51.787,124.672,81.621)
C5': (49.748,123.886,80.594)
P: (50.919,122.423,78.730)
C4': (50.440,125.046,81.272)
C2': (51.789,127.005,81.128)
O2': (51.358,127.903,82.134)
N1: (53.927,125.596,81.334)
O4: (57.777,124.886,80.428)
O2: (54.672,127.432,82.482)
C6: (54.245,124.537,80.515)
C5: (55.503,124.256,80.158)
O3': (49.462,127.049,80.409)
N3: (56.188,126.140,81.411)
OP1: (51.301,122.647,77.313)
OP2: (51.949,122.010,79.714)
C2: (54.913,126.459,81.793)
C1': (52.550,125.845,81.785)
C3': (50.650,126.277,80.409)
O5': (50.219,123.754,79.245)
O4': (51.787,124.672,81.621)
C5': (49.748,123.886,80.594)
P: (50.919,122.423,78.730)
C4': (50.440,125.046,81.272)
C2': (51.789,127.005,81.128)
O2': (51.358,127.903,82.134)
N1: (53.927,125.596,81.334)
O4: (57.777,124.886,80.428)
O2: (54.672,127.432,82.482)
C6: (54.245,124.537,80.515)
C5: (55.503,124.256,80.158)
O3': (49.462,127.049,80.409)
OP1: (58.533,127.701,82.459)
OP2: (57.402,128.070,84.724)
C3': (60.547,122.706,84.084)
C1': (58.515,121.605,83.744)
C5': (59.403,124.969,83.664)
O4': (58.175,122.911,84.175)
C8: (56.909,121.723,81.748)
O2': (60.513,120.524,82.872)
C6: (55.618,118.464,81.448)
C5: (56.199,119.719,81.707)
C4: (57.033,119.806,82.806)
P: (58.482,127.449,83.922)
C4': (59.405,123.661,84.440)
C2': (59.879,121.770,83.088)
C2: (56.711,117.696,83.335)
N1: (55.889,117.459,82.309)
N3: (57.336,118.818,83.669)
N6: (54.840,118.209,80.401)
N7: (56.122,120.940,81.050)
N9: (57.515,121.093,82.810)
O5': (58.412,125.878,84.199)
O3': (60.948,121.975,85.242)
OP2: (57.402,128.070,84.724)
C3': (60.547,122.706,84.084)
C1': (58.515,121.605,83.744)
C5': (59.403,124.969,83.664)
O4': (58.175,122.911,84.175)
C8: (56.909,121.723,81.748)
O2': (60.513,120.524,82.872)
C6: (55.618,118.464,81.448)
C5: (56.199,119.719,81.707)
C4: (57.033,119.806,82.806)
P: (58.482,127.449,83.922)
C4': (59.405,123.661,84.440)
C2': (59.879,121.770,83.088)
C2: (56.711,117.696,83.335)
N1: (55.889,117.459,82.309)
N3: (57.336,118.818,83.669)
N6: (54.840,118.209,80.401)
N7: (56.122,120.940,81.050)
N9: (57.515,121.093,82.810)
O5': (58.412,125.878,84.199)
O3': (60.948,121.975,85.242)
Image (generated by PyMOL):