Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2DR9:B13:B16
Extra
PDB:
ATOM 1 O3' U A 12 -22.813 0.964 -12.556 1.00 43.93 O
ATOM 2 P U A 13 -23.392 2.174 -11.681 1.00 45.66 P
ATOM 3 OP1 U A 13 -24.209 1.561 -10.604 1.00 47.35 O
ATOM 4 OP2 U A 13 -24.004 3.168 -12.601 1.00 43.45 O
ATOM 5 O5' U A 13 -22.096 2.836 -11.034 1.00 41.95 O
ATOM 6 C5' U A 13 -21.354 2.145 -10.041 1.00 39.48 C
ATOM 7 C4' U A 13 -20.293 3.044 -9.465 1.00 39.75 C
ATOM 8 O4' U A 13 -19.285 3.333 -10.476 1.00 38.56 O
ATOM 9 C3' U A 13 -20.757 4.422 -9.030 1.00 39.91 C
ATOM 10 O3' U A 13 -21.400 4.381 -7.758 1.00 41.64 O
ATOM 11 C2' U A 13 -19.434 5.175 -8.996 1.00 38.70 C
ATOM 12 O2' U A 13 -18.670 4.832 -7.863 1.00 38.11 O
ATOM 13 C1' U A 13 -18.743 4.624 -10.250 1.00 37.98 C
ATOM 14 N1 U A 13 -19.014 5.460 -11.429 1.00 36.91 N
ATOM 15 C2 U A 13 -18.215 6.582 -11.634 1.00 35.48 C
ATOM 16 O2 U A 13 -17.248 6.855 -10.939 1.00 33.06 O
ATOM 17 N3 U A 13 -18.591 7.371 -12.691 1.00 34.58 N
ATOM 18 C4 U A 13 -19.645 7.159 -13.557 1.00 34.53 C
ATOM 19 O4 U A 13 -19.955 8.050 -14.354 1.00 34.55 O
ATOM 20 C5 U A 13 -20.383 5.953 -13.314 1.00 34.52 C
ATOM 21 C6 U A 13 -20.050 5.165 -12.285 1.00 35.64 C
ATOM 22 P C A 14 -22.744 5.240 -7.512 1.00 41.87 P
ATOM 23 OP1 C A 14 -23.470 4.583 -6.399 1.00 42.62 O
ATOM 24 OP2 C A 14 -23.418 5.407 -8.823 1.00 42.63 O
ATOM 25 O5' C A 14 -22.205 6.670 -7.040 1.00 41.99 O
TER
ATOM 1 O3' G B 15 -16.056 11.400 -11.367 1.00 50.53 O
ATOM 2 P A B 16 -16.301 10.853 -12.859 1.00 51.52 P
ATOM 3 OP1 A B 16 -16.905 11.917 -13.701 1.00 53.71 O
ATOM 4 OP2 A B 16 -16.977 9.539 -12.745 1.00 54.04 O
ATOM 5 O5' A B 16 -14.838 10.576 -13.393 1.00 52.41 O
ATOM 6 C5' A B 16 -14.008 9.671 -12.713 1.00 54.68 C
ATOM 7 C4' A B 16 -12.710 9.512 -13.437 1.00 57.94 C
ATOM 8 O4' A B 16 -12.038 8.401 -12.801 1.00 59.43 O
ATOM 9 C3' A B 16 -12.841 9.143 -14.912 1.00 60.04 C
ATOM 10 O3' A B 16 -12.808 10.292 -15.780 1.00 62.82 O
ATOM 11 C2' A B 16 -11.746 8.112 -15.109 1.00 61.10 C
ATOM 12 O2' A B 16 -10.466 8.673 -15.301 1.00 63.78 O
ATOM 13 C1' A B 16 -11.778 7.400 -13.755 1.00 61.18 C
ATOM 14 N9 A B 16 -12.818 6.385 -13.590 1.00 60.65 N
ATOM 15 C8 A B 16 -14.036 6.255 -14.220 1.00 60.92 C
ATOM 16 N7 A B 16 -14.732 5.220 -13.815 1.00 60.40 N
ATOM 17 C5 A B 16 -13.918 4.631 -12.855 1.00 60.53 C
ATOM 18 C6 A B 16 -14.077 3.490 -12.046 1.00 61.32 C
ATOM 19 N6 A B 16 -15.158 2.706 -12.070 1.00 60.87 N
ATOM 20 N1 A B 16 -13.070 3.177 -11.198 1.00 61.89 N
ATOM 21 C2 A B 16 -11.985 3.966 -11.170 1.00 61.84 C
ATOM 22 N3 A B 16 -11.722 5.061 -11.877 1.00 59.87 N
ATOM 23 C4 A B 16 -12.739 5.339 -12.710 1.00 60.07 C
ATOM 24 P U B 17 -11.448 11.159 -15.965 1.00 64.01 P
ATOM 25 OP1 U B 17 -10.672 11.158 -14.699 1.00 64.71 O
ATOM 26 OP2 U B 17 -11.829 12.461 -16.571 1.00 63.30 O
ATOM 27 O5' U B 17 -10.589 10.370 -17.048 1.00 64.49 O
TER
ATOM 2 P U A 13 -23.392 2.174 -11.681 1.00 45.66 P
ATOM 3 OP1 U A 13 -24.209 1.561 -10.604 1.00 47.35 O
ATOM 4 OP2 U A 13 -24.004 3.168 -12.601 1.00 43.45 O
ATOM 5 O5' U A 13 -22.096 2.836 -11.034 1.00 41.95 O
ATOM 6 C5' U A 13 -21.354 2.145 -10.041 1.00 39.48 C
ATOM 7 C4' U A 13 -20.293 3.044 -9.465 1.00 39.75 C
ATOM 8 O4' U A 13 -19.285 3.333 -10.476 1.00 38.56 O
ATOM 9 C3' U A 13 -20.757 4.422 -9.030 1.00 39.91 C
ATOM 10 O3' U A 13 -21.400 4.381 -7.758 1.00 41.64 O
ATOM 11 C2' U A 13 -19.434 5.175 -8.996 1.00 38.70 C
ATOM 12 O2' U A 13 -18.670 4.832 -7.863 1.00 38.11 O
ATOM 13 C1' U A 13 -18.743 4.624 -10.250 1.00 37.98 C
ATOM 14 N1 U A 13 -19.014 5.460 -11.429 1.00 36.91 N
ATOM 15 C2 U A 13 -18.215 6.582 -11.634 1.00 35.48 C
ATOM 16 O2 U A 13 -17.248 6.855 -10.939 1.00 33.06 O
ATOM 17 N3 U A 13 -18.591 7.371 -12.691 1.00 34.58 N
ATOM 18 C4 U A 13 -19.645 7.159 -13.557 1.00 34.53 C
ATOM 19 O4 U A 13 -19.955 8.050 -14.354 1.00 34.55 O
ATOM 20 C5 U A 13 -20.383 5.953 -13.314 1.00 34.52 C
ATOM 21 C6 U A 13 -20.050 5.165 -12.285 1.00 35.64 C
ATOM 22 P C A 14 -22.744 5.240 -7.512 1.00 41.87 P
ATOM 23 OP1 C A 14 -23.470 4.583 -6.399 1.00 42.62 O
ATOM 24 OP2 C A 14 -23.418 5.407 -8.823 1.00 42.63 O
ATOM 25 O5' C A 14 -22.205 6.670 -7.040 1.00 41.99 O
TER
ATOM 1 O3' G B 15 -16.056 11.400 -11.367 1.00 50.53 O
ATOM 2 P A B 16 -16.301 10.853 -12.859 1.00 51.52 P
ATOM 3 OP1 A B 16 -16.905 11.917 -13.701 1.00 53.71 O
ATOM 4 OP2 A B 16 -16.977 9.539 -12.745 1.00 54.04 O
ATOM 5 O5' A B 16 -14.838 10.576 -13.393 1.00 52.41 O
ATOM 6 C5' A B 16 -14.008 9.671 -12.713 1.00 54.68 C
ATOM 7 C4' A B 16 -12.710 9.512 -13.437 1.00 57.94 C
ATOM 8 O4' A B 16 -12.038 8.401 -12.801 1.00 59.43 O
ATOM 9 C3' A B 16 -12.841 9.143 -14.912 1.00 60.04 C
ATOM 10 O3' A B 16 -12.808 10.292 -15.780 1.00 62.82 O
ATOM 11 C2' A B 16 -11.746 8.112 -15.109 1.00 61.10 C
ATOM 12 O2' A B 16 -10.466 8.673 -15.301 1.00 63.78 O
ATOM 13 C1' A B 16 -11.778 7.400 -13.755 1.00 61.18 C
ATOM 14 N9 A B 16 -12.818 6.385 -13.590 1.00 60.65 N
ATOM 15 C8 A B 16 -14.036 6.255 -14.220 1.00 60.92 C
ATOM 16 N7 A B 16 -14.732 5.220 -13.815 1.00 60.40 N
ATOM 17 C5 A B 16 -13.918 4.631 -12.855 1.00 60.53 C
ATOM 18 C6 A B 16 -14.077 3.490 -12.046 1.00 61.32 C
ATOM 19 N6 A B 16 -15.158 2.706 -12.070 1.00 60.87 N
ATOM 20 N1 A B 16 -13.070 3.177 -11.198 1.00 61.89 N
ATOM 21 C2 A B 16 -11.985 3.966 -11.170 1.00 61.84 C
ATOM 22 N3 A B 16 -11.722 5.061 -11.877 1.00 59.87 N
ATOM 23 C4 A B 16 -12.739 5.339 -12.710 1.00 60.07 C
ATOM 24 P U B 17 -11.448 11.159 -15.965 1.00 64.01 P
ATOM 25 OP1 U B 17 -10.672 11.158 -14.699 1.00 64.71 O
ATOM 26 OP2 U B 17 -11.829 12.461 -16.571 1.00 63.30 O
ATOM 27 O5' U B 17 -10.589 10.370 -17.048 1.00 64.49 O
TER
Atoms:
C4: (-19.645,7.159,-13.557)
N3: (-18.591,7.371,-12.691)
OP1: (-24.209,1.561,-10.604)
OP2: (-24.004,3.168,-12.601)
C2: (-18.215,6.582,-11.634)
C1': (-18.743,4.624,-10.250)
C3': (-20.757,4.422,-9.030)
O5': (-22.096,2.836,-11.034)
O4': (-19.285,3.333,-10.476)
C5': (-21.354,2.145,-10.041)
P: (-23.392,2.174,-11.681)
C4': (-20.293,3.044,-9.465)
C2': (-19.434,5.175,-8.996)
O2': (-18.670,4.832,-7.863)
N1: (-19.014,5.460,-11.429)
O4: (-19.955,8.050,-14.354)
O2: (-17.248,6.855,-10.939)
C6: (-20.050,5.165,-12.285)
C5: (-20.383,5.953,-13.314)
O3': (-21.400,4.381,-7.758)
N3: (-18.591,7.371,-12.691)
OP1: (-24.209,1.561,-10.604)
OP2: (-24.004,3.168,-12.601)
C2: (-18.215,6.582,-11.634)
C1': (-18.743,4.624,-10.250)
C3': (-20.757,4.422,-9.030)
O5': (-22.096,2.836,-11.034)
O4': (-19.285,3.333,-10.476)
C5': (-21.354,2.145,-10.041)
P: (-23.392,2.174,-11.681)
C4': (-20.293,3.044,-9.465)
C2': (-19.434,5.175,-8.996)
O2': (-18.670,4.832,-7.863)
N1: (-19.014,5.460,-11.429)
O4: (-19.955,8.050,-14.354)
O2: (-17.248,6.855,-10.939)
C6: (-20.050,5.165,-12.285)
C5: (-20.383,5.953,-13.314)
O3': (-21.400,4.381,-7.758)
OP1: (-16.905,11.917,-13.701)
OP2: (-16.977,9.539,-12.745)
C3': (-12.841,9.143,-14.912)
C1': (-11.778,7.400,-13.755)
C5': (-14.008,9.671,-12.713)
O4': (-12.038,8.401,-12.801)
C8: (-14.036,6.255,-14.220)
O2': (-10.466,8.673,-15.301)
C6: (-14.077,3.490,-12.046)
C5: (-13.918,4.631,-12.855)
C4: (-12.739,5.339,-12.710)
P: (-16.301,10.853,-12.859)
C4': (-12.710,9.512,-13.437)
C2': (-11.746,8.112,-15.109)
C2: (-11.985,3.966,-11.170)
N1: (-13.070,3.177,-11.198)
N3: (-11.722,5.061,-11.877)
N6: (-15.158,2.706,-12.070)
N7: (-14.732,5.220,-13.815)
N9: (-12.818,6.385,-13.590)
O5': (-14.838,10.576,-13.393)
O3': (-12.808,10.292,-15.780)
OP2: (-16.977,9.539,-12.745)
C3': (-12.841,9.143,-14.912)
C1': (-11.778,7.400,-13.755)
C5': (-14.008,9.671,-12.713)
O4': (-12.038,8.401,-12.801)
C8: (-14.036,6.255,-14.220)
O2': (-10.466,8.673,-15.301)
C6: (-14.077,3.490,-12.046)
C5: (-13.918,4.631,-12.855)
C4: (-12.739,5.339,-12.710)
P: (-16.301,10.853,-12.859)
C4': (-12.710,9.512,-13.437)
C2': (-11.746,8.112,-15.109)
C2: (-11.985,3.966,-11.170)
N1: (-13.070,3.177,-11.198)
N3: (-11.722,5.061,-11.877)
N6: (-15.158,2.706,-12.070)
N7: (-14.732,5.220,-13.815)
N9: (-12.818,6.385,-13.590)
O5': (-14.838,10.576,-13.393)
O3': (-12.808,10.292,-15.780)
Image (generated by PyMOL):