Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2DU3:D53:D56
Extra
PDB:
ATOM 1 O3' U A 52 4.529 70.492 -62.099 1.00120.40 O
ATOM 2 P U A 53 2.946 70.220 -61.994 1.00119.60 P
ATOM 3 OP1 U A 53 2.339 70.721 -63.256 1.00111.69 O
ATOM 4 OP2 U A 53 2.450 70.726 -60.686 1.00111.03 O
ATOM 5 O5' U A 53 2.839 68.632 -61.991 1.00106.04 O
ATOM 6 C5' U A 53 3.359 67.881 -63.076 1.00 88.26 C
ATOM 7 C4' U A 53 3.611 66.451 -62.663 1.00 96.38 C
ATOM 8 O4' U A 53 4.610 66.392 -61.607 1.00 89.21 O
ATOM 9 C3' U A 53 2.449 65.695 -62.048 1.00101.08 C
ATOM 10 O3' U A 53 1.488 65.302 -63.023 1.00102.60 O
ATOM 11 C2' U A 53 3.172 64.512 -61.413 1.00 96.27 C
ATOM 12 O2' U A 53 3.529 63.509 -62.349 1.00 91.22 O
ATOM 13 C1' U A 53 4.430 65.195 -60.864 1.00 89.51 C
ATOM 14 N1 U A 53 4.275 65.533 -59.442 1.00 94.15 N
ATOM 15 C2 U A 53 4.836 64.666 -58.518 1.00 99.27 C
ATOM 16 O2 U A 53 5.496 63.692 -58.842 1.00109.47 O
ATOM 17 N3 U A 53 4.599 64.983 -57.201 1.00 97.15 N
ATOM 18 C4 U A 53 3.878 66.059 -56.723 1.00 94.12 C
ATOM 19 O4 U A 53 3.664 66.151 -55.513 1.00 87.50 O
ATOM 20 C5 U A 53 3.359 66.931 -57.741 1.00 96.22 C
ATOM 21 C6 U A 53 3.573 66.645 -59.034 1.00 91.62 C
ATOM 22 P C A 54 -0.079 65.419 -62.680 1.00 87.37 P
ATOM 23 OP1 C A 54 -0.824 65.368 -63.965 1.00 84.72 O
ATOM 24 OP2 C A 54 -0.281 66.564 -61.757 1.00 98.25 O
ATOM 25 O5' C A 54 -0.382 64.094 -61.855 1.00 92.40 O
TER
ATOM 1 O3' G B 55 4.314 60.798 -54.794 1.00112.49 O
ATOM 2 P A B 56 5.381 61.906 -54.333 1.00107.81 P
ATOM 3 OP1 A B 56 5.357 61.940 -52.848 1.00115.32 O
ATOM 4 OP2 A B 56 5.134 63.157 -55.099 1.00114.25 O
ATOM 5 O5' A B 56 6.784 61.310 -54.795 1.00111.52 O
ATOM 6 C5' A B 56 7.401 60.239 -54.080 1.00108.36 C
ATOM 7 C4' A B 56 8.906 60.406 -54.087 1.00106.37 C
ATOM 8 O4' A B 56 9.339 60.551 -55.463 1.00 93.35 O
ATOM 9 C3' A B 56 9.441 61.642 -53.374 1.00109.55 C
ATOM 10 O3' A B 56 9.576 61.460 -51.951 1.00118.64 O
ATOM 11 C2' A B 56 10.723 61.982 -54.127 1.00107.09 C
ATOM 12 O2' A B 56 11.879 61.347 -53.635 1.00127.85 O
ATOM 13 C1' A B 56 10.416 61.465 -55.535 1.00 97.80 C
ATOM 14 N9 A B 56 10.097 62.487 -56.530 1.00 86.87 N
ATOM 15 C8 A B 56 9.212 63.536 -56.447 1.00 81.35 C
ATOM 16 N7 A B 56 9.164 64.274 -57.533 1.00 85.13 N
ATOM 17 C5 A B 56 10.082 63.672 -58.389 1.00 86.33 C
ATOM 18 C6 A B 56 10.503 63.975 -59.705 1.00 87.26 C
ATOM 19 N6 A B 56 10.039 65.007 -60.413 1.00 90.86 N
ATOM 20 N1 A B 56 11.432 63.167 -60.272 1.00 88.02 N
ATOM 21 C2 A B 56 11.904 62.132 -59.558 1.00 84.96 C
ATOM 22 N3 A B 56 11.592 61.748 -58.318 1.00 74.47 N
ATOM 23 C4 A B 56 10.663 62.570 -57.783 1.00 88.66 C
ATOM 24 P A B 57 10.326 60.156 -51.340 1.00122.67 P
ATOM 25 OP1 A B 57 9.778 58.934 -51.987 1.00123.12 O
ATOM 26 OP2 A B 57 10.267 60.279 -49.859 1.00122.16 O
ATOM 27 O5' A B 57 11.856 60.284 -51.767 1.00126.77 O
TER
ATOM 2 P U A 53 2.946 70.220 -61.994 1.00119.60 P
ATOM 3 OP1 U A 53 2.339 70.721 -63.256 1.00111.69 O
ATOM 4 OP2 U A 53 2.450 70.726 -60.686 1.00111.03 O
ATOM 5 O5' U A 53 2.839 68.632 -61.991 1.00106.04 O
ATOM 6 C5' U A 53 3.359 67.881 -63.076 1.00 88.26 C
ATOM 7 C4' U A 53 3.611 66.451 -62.663 1.00 96.38 C
ATOM 8 O4' U A 53 4.610 66.392 -61.607 1.00 89.21 O
ATOM 9 C3' U A 53 2.449 65.695 -62.048 1.00101.08 C
ATOM 10 O3' U A 53 1.488 65.302 -63.023 1.00102.60 O
ATOM 11 C2' U A 53 3.172 64.512 -61.413 1.00 96.27 C
ATOM 12 O2' U A 53 3.529 63.509 -62.349 1.00 91.22 O
ATOM 13 C1' U A 53 4.430 65.195 -60.864 1.00 89.51 C
ATOM 14 N1 U A 53 4.275 65.533 -59.442 1.00 94.15 N
ATOM 15 C2 U A 53 4.836 64.666 -58.518 1.00 99.27 C
ATOM 16 O2 U A 53 5.496 63.692 -58.842 1.00109.47 O
ATOM 17 N3 U A 53 4.599 64.983 -57.201 1.00 97.15 N
ATOM 18 C4 U A 53 3.878 66.059 -56.723 1.00 94.12 C
ATOM 19 O4 U A 53 3.664 66.151 -55.513 1.00 87.50 O
ATOM 20 C5 U A 53 3.359 66.931 -57.741 1.00 96.22 C
ATOM 21 C6 U A 53 3.573 66.645 -59.034 1.00 91.62 C
ATOM 22 P C A 54 -0.079 65.419 -62.680 1.00 87.37 P
ATOM 23 OP1 C A 54 -0.824 65.368 -63.965 1.00 84.72 O
ATOM 24 OP2 C A 54 -0.281 66.564 -61.757 1.00 98.25 O
ATOM 25 O5' C A 54 -0.382 64.094 -61.855 1.00 92.40 O
TER
ATOM 1 O3' G B 55 4.314 60.798 -54.794 1.00112.49 O
ATOM 2 P A B 56 5.381 61.906 -54.333 1.00107.81 P
ATOM 3 OP1 A B 56 5.357 61.940 -52.848 1.00115.32 O
ATOM 4 OP2 A B 56 5.134 63.157 -55.099 1.00114.25 O
ATOM 5 O5' A B 56 6.784 61.310 -54.795 1.00111.52 O
ATOM 6 C5' A B 56 7.401 60.239 -54.080 1.00108.36 C
ATOM 7 C4' A B 56 8.906 60.406 -54.087 1.00106.37 C
ATOM 8 O4' A B 56 9.339 60.551 -55.463 1.00 93.35 O
ATOM 9 C3' A B 56 9.441 61.642 -53.374 1.00109.55 C
ATOM 10 O3' A B 56 9.576 61.460 -51.951 1.00118.64 O
ATOM 11 C2' A B 56 10.723 61.982 -54.127 1.00107.09 C
ATOM 12 O2' A B 56 11.879 61.347 -53.635 1.00127.85 O
ATOM 13 C1' A B 56 10.416 61.465 -55.535 1.00 97.80 C
ATOM 14 N9 A B 56 10.097 62.487 -56.530 1.00 86.87 N
ATOM 15 C8 A B 56 9.212 63.536 -56.447 1.00 81.35 C
ATOM 16 N7 A B 56 9.164 64.274 -57.533 1.00 85.13 N
ATOM 17 C5 A B 56 10.082 63.672 -58.389 1.00 86.33 C
ATOM 18 C6 A B 56 10.503 63.975 -59.705 1.00 87.26 C
ATOM 19 N6 A B 56 10.039 65.007 -60.413 1.00 90.86 N
ATOM 20 N1 A B 56 11.432 63.167 -60.272 1.00 88.02 N
ATOM 21 C2 A B 56 11.904 62.132 -59.558 1.00 84.96 C
ATOM 22 N3 A B 56 11.592 61.748 -58.318 1.00 74.47 N
ATOM 23 C4 A B 56 10.663 62.570 -57.783 1.00 88.66 C
ATOM 24 P A B 57 10.326 60.156 -51.340 1.00122.67 P
ATOM 25 OP1 A B 57 9.778 58.934 -51.987 1.00123.12 O
ATOM 26 OP2 A B 57 10.267 60.279 -49.859 1.00122.16 O
ATOM 27 O5' A B 57 11.856 60.284 -51.767 1.00126.77 O
TER
Atoms:
C4: (3.878,66.059,-56.723)
N3: (4.599,64.983,-57.201)
OP1: (2.339,70.721,-63.256)
OP2: (2.450,70.726,-60.686)
C2: (4.836,64.666,-58.518)
C1': (4.430,65.195,-60.864)
C3': (2.449,65.695,-62.048)
O5': (2.839,68.632,-61.991)
O4': (4.610,66.392,-61.607)
C5': (3.359,67.881,-63.076)
P: (2.946,70.220,-61.994)
C4': (3.611,66.451,-62.663)
C2': (3.172,64.512,-61.413)
O2': (3.529,63.509,-62.349)
N1: (4.275,65.533,-59.442)
O4: (3.664,66.151,-55.513)
O2: (5.496,63.692,-58.842)
C6: (3.573,66.645,-59.034)
C5: (3.359,66.931,-57.741)
O3': (1.488,65.302,-63.023)
N3: (4.599,64.983,-57.201)
OP1: (2.339,70.721,-63.256)
OP2: (2.450,70.726,-60.686)
C2: (4.836,64.666,-58.518)
C1': (4.430,65.195,-60.864)
C3': (2.449,65.695,-62.048)
O5': (2.839,68.632,-61.991)
O4': (4.610,66.392,-61.607)
C5': (3.359,67.881,-63.076)
P: (2.946,70.220,-61.994)
C4': (3.611,66.451,-62.663)
C2': (3.172,64.512,-61.413)
O2': (3.529,63.509,-62.349)
N1: (4.275,65.533,-59.442)
O4: (3.664,66.151,-55.513)
O2: (5.496,63.692,-58.842)
C6: (3.573,66.645,-59.034)
C5: (3.359,66.931,-57.741)
O3': (1.488,65.302,-63.023)
OP1: (5.357,61.940,-52.848)
OP2: (5.134,63.157,-55.099)
C3': (9.441,61.642,-53.374)
C1': (10.416,61.465,-55.535)
C5': (7.401,60.239,-54.080)
O4': (9.339,60.551,-55.463)
C8: (9.212,63.536,-56.447)
O2': (11.879,61.347,-53.635)
C6: (10.503,63.975,-59.705)
C5: (10.082,63.672,-58.389)
C4: (10.663,62.570,-57.783)
P: (5.381,61.906,-54.333)
C4': (8.906,60.406,-54.087)
C2': (10.723,61.982,-54.127)
C2: (11.904,62.132,-59.558)
N1: (11.432,63.167,-60.272)
N3: (11.592,61.748,-58.318)
N6: (10.039,65.007,-60.413)
N7: (9.164,64.274,-57.533)
N9: (10.097,62.487,-56.530)
O5': (6.784,61.310,-54.795)
O3': (9.576,61.460,-51.951)
OP2: (5.134,63.157,-55.099)
C3': (9.441,61.642,-53.374)
C1': (10.416,61.465,-55.535)
C5': (7.401,60.239,-54.080)
O4': (9.339,60.551,-55.463)
C8: (9.212,63.536,-56.447)
O2': (11.879,61.347,-53.635)
C6: (10.503,63.975,-59.705)
C5: (10.082,63.672,-58.389)
C4: (10.663,62.570,-57.783)
P: (5.381,61.906,-54.333)
C4': (8.906,60.406,-54.087)
C2': (10.723,61.982,-54.127)
C2: (11.904,62.132,-59.558)
N1: (11.432,63.167,-60.272)
N3: (11.592,61.748,-58.318)
N6: (10.039,65.007,-60.413)
N7: (9.164,64.274,-57.533)
N9: (10.097,62.487,-56.530)
O5': (6.784,61.310,-54.795)
O3': (9.576,61.460,-51.951)
Image (generated by PyMOL):