ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J00:A767:A770

Extra

PDB:
ATOM 1 O3' U A 766 -52.318 127.675 92.900 1.00 38.64 O
ATOM 2 P U A 767 -53.691 127.235 93.591 1.00 35.99 P
ATOM 3 OP1 U A 767 -54.674 126.972 92.502 1.00 41.06 O
ATOM 4 OP2 U A 767 -54.020 128.214 94.660 1.00 42.50 O
ATOM 5 O5' U A 767 -53.306 125.850 94.274 1.00 33.29 O
ATOM 6 C5' U A 767 -52.969 124.715 93.458 1.00 31.12 C
ATOM 7 C4' U A 767 -52.657 123.521 94.315 1.00 29.32 C
ATOM 8 O4' U A 767 -51.366 123.694 94.939 1.00 29.65 O
ATOM 9 C3' U A 767 -53.624 123.260 95.459 1.00 30.10 C
ATOM 10 O3' U A 767 -54.756 122.514 95.044 1.00 31.30 O
ATOM 11 C2' U A 767 -52.771 122.462 96.427 1.00 30.15 C
ATOM 12 O2' U A 767 -52.730 121.102 96.047 1.00 31.31 O
ATOM 13 C1' U A 767 -51.392 123.100 96.224 1.00 31.07 C
ATOM 14 N1 U A 767 -51.102 124.132 97.234 1.00 58.85 N
ATOM 15 C2 U A 767 -50.431 123.738 98.379 1.00 59.72 C
ATOM 16 O2 U A 767 -50.061 122.595 98.579 1.00 59.34 O
ATOM 17 N3 U A 767 -50.207 124.735 99.290 1.00 60.44 N
ATOM 18 C4 U A 767 -50.574 126.052 99.186 1.00 59.29 C
ATOM 19 O4 U A 767 -50.289 126.830 100.100 1.00 62.61 O
ATOM 20 C5 U A 767 -51.259 126.386 97.976 1.00 57.81 C
ATOM 21 C6 U A 767 -51.490 125.440 97.063 1.00 58.23 C
ATOM 22 P A A 768 -56.134 122.652 95.854 1.00 27.12 P
ATOM 23 OP1 A A 768 -57.177 121.893 95.123 1.00 46.31 O
ATOM 24 OP2 A A 768 -56.355 124.081 96.164 1.00 45.90 O
ATOM 25 O5' A A 768 -55.858 121.913 97.234 1.00 20.80 O
TER

ATOM 1 O3' G B 769 -49.325 122.205 103.108 1.00 31.05 O
ATOM 2 P A B 770 -48.525 123.516 102.641 1.00 23.44 P
ATOM 3 OP1 A B 770 -47.660 123.926 103.777 1.00 23.72 O
ATOM 4 OP2 A B 770 -49.476 124.487 102.059 1.00 22.57 O
ATOM 5 O5' A B 770 -47.545 122.978 101.515 1.00 12.20 O
ATOM 6 C5' A B 770 -46.369 122.282 101.906 1.00 11.09 C
ATOM 7 C4' A B 770 -45.433 122.118 100.745 1.00 10.36 C
ATOM 8 O4' A B 770 -45.918 121.083 99.851 1.00 9.82 O
ATOM 9 C3' A B 770 -45.166 123.344 99.878 1.00 10.55 C
ATOM 10 O3' A B 770 -43.788 123.336 99.535 1.00 12.16 O
ATOM 11 C2' A B 770 -45.931 123.006 98.600 1.00 10.26 C
ATOM 12 O2' A B 770 -45.414 123.615 97.436 1.00 8.53 O
ATOM 13 C1' A B 770 -45.687 121.505 98.539 1.00 10.81 C
ATOM 14 N9 A B 770 -46.498 120.713 97.637 1.00 8.24 N
ATOM 15 C8 A B 770 -47.852 120.691 97.463 1.00 9.93 C
ATOM 16 N7 A B 770 -48.249 119.851 96.538 1.00 10.82 N
ATOM 17 C5 A B 770 -47.074 119.284 96.085 1.00 10.61 C
ATOM 18 C6 A B 770 -46.818 118.339 95.113 1.00 11.15 C
ATOM 19 N6 A B 770 -47.774 117.773 94.387 1.00 12.02 N
ATOM 20 N1 A B 770 -45.531 117.990 94.896 1.00 11.39 N
ATOM 21 C2 A B 770 -44.583 118.573 95.622 1.00 10.47 C
ATOM 22 N3 A B 770 -44.703 119.485 96.572 1.00 9.13 N
ATOM 23 C4 A B 770 -45.991 119.802 96.755 1.00 9.21 C
ATOM 24 P U B 771 -42.724 124.028 100.498 1.00 6.93 P
ATOM 25 OP1 U B 771 -43.494 124.933 101.402 1.00 11.45 O
ATOM 26 OP2 U B 771 -41.631 124.584 99.656 1.00 10.56 O
ATOM 27 O5' U B 771 -42.113 122.820 101.334 1.00 31.82 O
TER

Atoms:
C4: (-50.574,126.052,99.186)
N3: (-50.207,124.735,99.290)
OP1: (-54.674,126.972,92.502)
OP2: (-54.020,128.214,94.660)
C2: (-50.431,123.738,98.379)
C1': (-51.392,123.100,96.224)
C3': (-53.624,123.260,95.459)
O5': (-53.306,125.850,94.274)
O4': (-51.366,123.694,94.939)
C5': (-52.969,124.715,93.458)
P: (-53.691,127.235,93.591)
C4': (-52.657,123.521,94.315)
C2': (-52.771,122.462,96.427)
O2': (-52.730,121.102,96.047)
N1: (-51.102,124.132,97.234)
O4: (-50.289,126.830,100.100)
O2: (-50.061,122.595,98.579)
C6: (-51.490,125.440,97.063)
C5: (-51.259,126.386,97.976)
O3': (-54.756,122.514,95.044)
OP1: (-47.660,123.926,103.777)
OP2: (-49.476,124.487,102.059)
C3': (-45.166,123.344,99.878)
C1': (-45.687,121.505,98.539)
C5': (-46.369,122.282,101.906)
O4': (-45.918,121.083,99.851)
C8: (-47.852,120.691,97.463)
O2': (-45.414,123.615,97.436)
C6: (-46.818,118.339,95.113)
C5: (-47.074,119.284,96.085)
C4: (-45.991,119.802,96.755)
P: (-48.525,123.516,102.641)
C4': (-45.433,122.118,100.745)
C2': (-45.931,123.006,98.600)
C2: (-44.583,118.573,95.622)
N1: (-45.531,117.990,94.896)
N3: (-44.703,119.485,96.572)
N6: (-47.774,117.773,94.387)
N7: (-48.249,119.851,96.538)
N9: (-46.498,120.713,97.637)
O5': (-47.545,122.978,101.515)
O3': (-43.788,123.336,99.535)
Image (generated by PyMOL):
PyMOL image
show in jmol