Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0509:013
Extra
PDB:
ATOM 1 O3' A A 508 28.204 134.783 79.121 1.00 28.92 O
ATOM 2 P A A 509 28.338 135.738 80.405 1.00 31.42 P
ATOM 3 OP1 A A 509 27.956 134.950 81.597 1.00 29.72 O
ATOM 4 OP2 A A 509 27.660 137.031 80.128 1.00 30.25 O
ATOM 5 O5' A A 509 29.899 136.010 80.523 1.00 33.29 O
ATOM 6 C5' A A 509 30.806 134.953 80.877 1.00 31.20 C
ATOM 7 C4' A A 509 32.226 135.454 80.832 1.00 30.19 C
ATOM 8 O4' A A 509 32.565 135.858 79.483 1.00 30.78 O
ATOM 9 C3' A A 509 32.497 136.698 81.650 1.00 29.51 C
ATOM 10 O3' A A 509 32.704 136.345 83.011 1.00 32.62 O
ATOM 11 C2' A A 509 33.776 137.215 81.010 1.00 29.39 C
ATOM 12 O2' A A 509 34.924 136.535 81.459 1.00 33.26 O
ATOM 13 C1' A A 509 33.550 136.867 79.536 1.00 29.39 C
ATOM 14 N9 A A 509 33.108 138.021 78.761 1.00 30.49 N
ATOM 15 C8 A A 509 31.905 138.676 78.805 1.00 32.17 C
ATOM 16 N7 A A 509 31.872 139.767 78.077 1.00 34.54 N
ATOM 17 C5 A A 509 33.130 139.814 77.489 1.00 33.60 C
ATOM 18 C6 A A 509 33.743 140.741 76.622 1.00 32.96 C
ATOM 19 N6 A A 509 33.157 141.858 76.186 1.00 32.63 N
ATOM 20 N1 A A 509 35.002 140.481 76.218 1.00 32.13 N
ATOM 21 C2 A A 509 35.600 139.375 76.660 1.00 32.40 C
ATOM 22 N3 A A 509 35.140 138.441 77.482 1.00 33.55 N
ATOM 23 C4 A A 509 33.886 138.724 77.871 1.00 32.24 C
ATOM 24 P U A 510 31.874 137.084 84.169 1.00 32.90 P
ATOM 25 OP1 U A 510 32.538 136.725 85.433 1.00 33.26 O
ATOM 26 OP2 U A 510 30.431 136.809 83.999 1.00 33.62 O
ATOM 27 O5' U A 510 32.116 138.629 83.893 1.00 31.58 O
TER
ATOM 1 O3' U B 12 34.471 148.288 73.847 1.00 35.76 O
ATOM 2 P G B 13 34.966 147.882 72.377 1.00 36.73 P
ATOM 3 OP1 G B 13 36.363 148.348 72.237 1.00 37.67 O
ATOM 4 OP2 G B 13 33.943 148.336 71.410 1.00 39.88 O
ATOM 5 O5' G B 13 34.967 146.290 72.379 1.00 38.51 O
ATOM 6 C5' G B 13 35.882 145.536 73.199 1.00 36.51 C
ATOM 7 C4' G B 13 35.547 144.070 73.116 1.00 35.49 C
ATOM 8 O4' G B 13 34.249 143.843 73.723 1.00 38.98 O
ATOM 9 C3' G B 13 35.398 143.548 71.699 1.00 34.65 C
ATOM 10 O3' G B 13 36.659 143.183 71.165 1.00 31.89 O
ATOM 11 C2' G B 13 34.460 142.364 71.879 1.00 36.33 C
ATOM 12 O2' G B 13 35.137 141.234 72.383 1.00 35.58 O
ATOM 13 C1' G B 13 33.517 142.895 72.961 1.00 37.46 C
ATOM 14 N9 G B 13 32.319 143.565 72.460 1.00 38.24 N
ATOM 15 C8 G B 13 32.235 144.840 71.960 1.00 37.21 C
ATOM 16 N7 G B 13 31.021 145.185 71.636 1.00 37.59 N
ATOM 17 C5 G B 13 30.258 144.065 71.927 1.00 37.73 C
ATOM 18 C6 G B 13 28.875 143.843 71.784 1.00 37.01 C
ATOM 19 O6 G B 13 28.017 144.617 71.361 1.00 40.71 O
ATOM 20 N1 G B 13 28.514 142.568 72.190 1.00 36.13 N
ATOM 21 C2 G B 13 29.374 141.625 72.673 1.00 37.85 C
ATOM 22 N2 G B 13 28.836 140.451 73.010 1.00 37.68 N
ATOM 23 N3 G B 13 30.673 141.817 72.815 1.00 40.53 N
ATOM 24 C4 G B 13 31.044 143.053 72.425 1.00 39.15 C
ATOM 25 P G B 14 36.962 143.416 69.605 1.00 29.95 P
ATOM 26 OP1 G B 14 38.426 143.338 69.412 1.00 29.80 O
ATOM 27 OP2 G B 14 36.230 144.636 69.180 1.00 31.61 O
ATOM 28 O5' G B 14 36.296 142.165 68.887 1.00 27.24 O
TER
ATOM 2 P A A 509 28.338 135.738 80.405 1.00 31.42 P
ATOM 3 OP1 A A 509 27.956 134.950 81.597 1.00 29.72 O
ATOM 4 OP2 A A 509 27.660 137.031 80.128 1.00 30.25 O
ATOM 5 O5' A A 509 29.899 136.010 80.523 1.00 33.29 O
ATOM 6 C5' A A 509 30.806 134.953 80.877 1.00 31.20 C
ATOM 7 C4' A A 509 32.226 135.454 80.832 1.00 30.19 C
ATOM 8 O4' A A 509 32.565 135.858 79.483 1.00 30.78 O
ATOM 9 C3' A A 509 32.497 136.698 81.650 1.00 29.51 C
ATOM 10 O3' A A 509 32.704 136.345 83.011 1.00 32.62 O
ATOM 11 C2' A A 509 33.776 137.215 81.010 1.00 29.39 C
ATOM 12 O2' A A 509 34.924 136.535 81.459 1.00 33.26 O
ATOM 13 C1' A A 509 33.550 136.867 79.536 1.00 29.39 C
ATOM 14 N9 A A 509 33.108 138.021 78.761 1.00 30.49 N
ATOM 15 C8 A A 509 31.905 138.676 78.805 1.00 32.17 C
ATOM 16 N7 A A 509 31.872 139.767 78.077 1.00 34.54 N
ATOM 17 C5 A A 509 33.130 139.814 77.489 1.00 33.60 C
ATOM 18 C6 A A 509 33.743 140.741 76.622 1.00 32.96 C
ATOM 19 N6 A A 509 33.157 141.858 76.186 1.00 32.63 N
ATOM 20 N1 A A 509 35.002 140.481 76.218 1.00 32.13 N
ATOM 21 C2 A A 509 35.600 139.375 76.660 1.00 32.40 C
ATOM 22 N3 A A 509 35.140 138.441 77.482 1.00 33.55 N
ATOM 23 C4 A A 509 33.886 138.724 77.871 1.00 32.24 C
ATOM 24 P U A 510 31.874 137.084 84.169 1.00 32.90 P
ATOM 25 OP1 U A 510 32.538 136.725 85.433 1.00 33.26 O
ATOM 26 OP2 U A 510 30.431 136.809 83.999 1.00 33.62 O
ATOM 27 O5' U A 510 32.116 138.629 83.893 1.00 31.58 O
TER
ATOM 1 O3' U B 12 34.471 148.288 73.847 1.00 35.76 O
ATOM 2 P G B 13 34.966 147.882 72.377 1.00 36.73 P
ATOM 3 OP1 G B 13 36.363 148.348 72.237 1.00 37.67 O
ATOM 4 OP2 G B 13 33.943 148.336 71.410 1.00 39.88 O
ATOM 5 O5' G B 13 34.967 146.290 72.379 1.00 38.51 O
ATOM 6 C5' G B 13 35.882 145.536 73.199 1.00 36.51 C
ATOM 7 C4' G B 13 35.547 144.070 73.116 1.00 35.49 C
ATOM 8 O4' G B 13 34.249 143.843 73.723 1.00 38.98 O
ATOM 9 C3' G B 13 35.398 143.548 71.699 1.00 34.65 C
ATOM 10 O3' G B 13 36.659 143.183 71.165 1.00 31.89 O
ATOM 11 C2' G B 13 34.460 142.364 71.879 1.00 36.33 C
ATOM 12 O2' G B 13 35.137 141.234 72.383 1.00 35.58 O
ATOM 13 C1' G B 13 33.517 142.895 72.961 1.00 37.46 C
ATOM 14 N9 G B 13 32.319 143.565 72.460 1.00 38.24 N
ATOM 15 C8 G B 13 32.235 144.840 71.960 1.00 37.21 C
ATOM 16 N7 G B 13 31.021 145.185 71.636 1.00 37.59 N
ATOM 17 C5 G B 13 30.258 144.065 71.927 1.00 37.73 C
ATOM 18 C6 G B 13 28.875 143.843 71.784 1.00 37.01 C
ATOM 19 O6 G B 13 28.017 144.617 71.361 1.00 40.71 O
ATOM 20 N1 G B 13 28.514 142.568 72.190 1.00 36.13 N
ATOM 21 C2 G B 13 29.374 141.625 72.673 1.00 37.85 C
ATOM 22 N2 G B 13 28.836 140.451 73.010 1.00 37.68 N
ATOM 23 N3 G B 13 30.673 141.817 72.815 1.00 40.53 N
ATOM 24 C4 G B 13 31.044 143.053 72.425 1.00 39.15 C
ATOM 25 P G B 14 36.962 143.416 69.605 1.00 29.95 P
ATOM 26 OP1 G B 14 38.426 143.338 69.412 1.00 29.80 O
ATOM 27 OP2 G B 14 36.230 144.636 69.180 1.00 31.61 O
ATOM 28 O5' G B 14 36.296 142.165 68.887 1.00 27.24 O
TER
Atoms:
OP1: (27.956,134.950,81.597)
OP2: (27.660,137.031,80.128)
C3': (32.497,136.698,81.650)
C1': (33.550,136.867,79.536)
C5': (30.806,134.953,80.877)
O4': (32.565,135.858,79.483)
C8: (31.905,138.676,78.805)
O2': (34.924,136.535,81.459)
C6: (33.743,140.741,76.622)
C5: (33.130,139.814,77.489)
C4: (33.886,138.724,77.871)
P: (28.338,135.738,80.405)
C4': (32.226,135.454,80.832)
C2': (33.776,137.215,81.010)
C2: (35.600,139.375,76.660)
N1: (35.002,140.481,76.218)
N3: (35.140,138.441,77.482)
N6: (33.157,141.858,76.186)
N7: (31.872,139.767,78.077)
N9: (33.108,138.021,78.761)
O5': (29.899,136.010,80.523)
O3': (32.704,136.345,83.011)
OP2: (27.660,137.031,80.128)
C3': (32.497,136.698,81.650)
C1': (33.550,136.867,79.536)
C5': (30.806,134.953,80.877)
O4': (32.565,135.858,79.483)
C8: (31.905,138.676,78.805)
O2': (34.924,136.535,81.459)
C6: (33.743,140.741,76.622)
C5: (33.130,139.814,77.489)
C4: (33.886,138.724,77.871)
P: (28.338,135.738,80.405)
C4': (32.226,135.454,80.832)
C2': (33.776,137.215,81.010)
C2: (35.600,139.375,76.660)
N1: (35.002,140.481,76.218)
N3: (35.140,138.441,77.482)
N6: (33.157,141.858,76.186)
N7: (31.872,139.767,78.077)
N9: (33.108,138.021,78.761)
O5': (29.899,136.010,80.523)
O3': (32.704,136.345,83.011)
OP1: (36.363,148.348,72.237)
OP2: (33.943,148.336,71.410)
C3': (35.398,143.548,71.699)
C1': (33.517,142.895,72.961)
C5': (35.882,145.536,73.199)
O6: (28.017,144.617,71.361)
O4': (34.249,143.843,73.723)
C8: (32.235,144.840,71.960)
C2: (29.374,141.625,72.673)
C6: (28.875,143.843,71.784)
C5: (30.258,144.065,71.927)
C4: (31.044,143.053,72.425)
P: (34.966,147.882,72.377)
C4': (35.547,144.070,73.116)
C2': (34.460,142.364,71.879)
O2': (35.137,141.234,72.383)
N1: (28.514,142.568,72.190)
N2: (28.836,140.451,73.010)
N3: (30.673,141.817,72.815)
N7: (31.021,145.185,71.636)
N9: (32.319,143.565,72.460)
O5': (34.967,146.290,72.379)
O3': (36.659,143.183,71.165)
OP2: (33.943,148.336,71.410)
C3': (35.398,143.548,71.699)
C1': (33.517,142.895,72.961)
C5': (35.882,145.536,73.199)
O6: (28.017,144.617,71.361)
O4': (34.249,143.843,73.723)
C8: (32.235,144.840,71.960)
C2: (29.374,141.625,72.673)
C6: (28.875,143.843,71.784)
C5: (30.258,144.065,71.927)
C4: (31.044,143.053,72.425)
P: (34.966,147.882,72.377)
C4': (35.547,144.070,73.116)
C2': (34.460,142.364,71.879)
O2': (35.137,141.234,72.383)
N1: (28.514,142.568,72.190)
N2: (28.836,140.451,73.010)
N3: (30.673,141.817,72.815)
N7: (31.021,145.185,71.636)
N9: (32.319,143.565,72.460)
O5': (34.967,146.290,72.379)
O3': (36.659,143.183,71.165)
Image (generated by PyMOL):