ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2ZZM:B66:B69

Extra

PDB:
ATOM 1 O3' U A 65 11.426 -61.695 -22.450 1.00 78.64 O
ATOM 2 P U A 66 12.624 -62.396 -23.241 1.00 86.42 P
ATOM 3 OP1 U A 66 12.283 -63.812 -23.541 1.00 97.99 O
ATOM 4 OP2 U A 66 13.878 -62.079 -22.500 1.00 60.51 O
ATOM 5 O5' U A 66 12.597 -61.605 -24.611 1.00 82.59 O
ATOM 6 C5' U A 66 13.779 -61.136 -25.186 1.00 74.80 C
ATOM 7 C4' U A 66 13.494 -59.913 -25.992 1.00 66.79 C
ATOM 8 O4' U A 66 13.123 -58.805 -25.130 1.00 64.99 O
ATOM 9 C3' U A 66 14.734 -59.452 -26.705 1.00 68.81 C
ATOM 10 O3' U A 66 14.761 -60.172 -27.919 1.00 84.12 O
ATOM 11 C2' U A 66 14.453 -57.978 -26.883 1.00 62.87 C
ATOM 12 O2' U A 66 13.529 -57.790 -27.939 1.00 70.06 O
ATOM 13 C1' U A 66 13.825 -57.644 -25.525 1.00 63.21 C
ATOM 14 N1 U A 66 14.822 -57.368 -24.479 1.00 68.52 N
ATOM 15 C2 U A 66 15.573 -56.194 -24.559 1.00 74.73 C
ATOM 16 O2 U A 66 15.396 -55.338 -25.414 1.00 69.42 O
ATOM 17 N3 U A 66 16.538 -56.060 -23.590 1.00 75.25 N
ATOM 18 C4 U A 66 16.821 -56.946 -22.564 1.00 79.26 C
ATOM 19 O4 U A 66 17.814 -56.750 -21.847 1.00 73.76 O
ATOM 20 C5 U A 66 15.968 -58.102 -22.524 1.00 68.61 C
ATOM 21 C6 U A 66 15.024 -58.266 -23.456 1.00 59.16 C
ATOM 22 P C A 67 15.691 -61.471 -28.045 1.00 72.44 P
ATOM 23 OP1 C A 67 14.975 -62.401 -28.953 1.00 76.65 O
ATOM 24 OP2 C A 67 16.087 -61.918 -26.680 1.00 65.73 O
ATOM 25 O5' C A 67 16.988 -60.901 -28.765 1.00 62.83 O
TER

ATOM 1 O3' A B 68 19.302 -52.751 -25.096 1.00 48.90 O
ATOM 2 P A B 69 18.541 -52.349 -23.729 1.00 55.53 P
ATOM 3 OP1 A B 69 19.524 -51.650 -22.871 1.00 64.15 O
ATOM 4 OP2 A B 69 17.788 -53.492 -23.173 1.00 49.77 O
ATOM 5 O5' A B 69 17.459 -51.279 -24.201 1.00 59.73 O
ATOM 6 C5' A B 69 17.733 -49.876 -24.210 1.00 40.96 C
ATOM 7 C4' A B 69 16.639 -49.145 -23.454 1.00 52.01 C
ATOM 8 O4' A B 69 15.358 -49.666 -23.868 1.00 49.46 O
ATOM 9 C3' A B 69 16.744 -49.294 -21.937 1.00 44.40 C
ATOM 10 O3' A B 69 16.694 -48.029 -21.245 1.00 60.61 O
ATOM 11 C2' A B 69 15.469 -50.016 -21.521 1.00 45.38 C
ATOM 12 O2' A B 69 14.852 -49.497 -20.383 1.00 49.43 O
ATOM 13 C1' A B 69 14.562 -49.878 -22.734 1.00 57.91 C
ATOM 14 N9 A B 69 13.721 -51.050 -22.922 1.00 66.93 N
ATOM 15 C8 A B 69 13.963 -52.345 -22.542 1.00 61.04 C
ATOM 16 N7 A B 69 12.978 -53.161 -22.811 1.00 66.38 N
ATOM 17 C5 A B 69 12.029 -52.350 -23.418 1.00 63.36 C
ATOM 18 C6 A B 69 10.770 -52.617 -23.950 1.00 64.26 C
ATOM 19 N6 A B 69 10.199 -53.818 -23.911 1.00 82.68 N
ATOM 20 N1 A B 69 10.101 -51.595 -24.525 1.00 64.78 N
ATOM 21 C2 A B 69 10.664 -50.384 -24.528 1.00 63.26 C
ATOM 22 N3 A B 69 11.834 -50.002 -24.037 1.00 63.76 N
ATOM 23 C4 A B 69 12.478 -51.049 -23.498 1.00 67.42 C
ATOM 24 P A B 70 17.604 -46.769 -21.684 1.00 40.12 P
ATOM 25 OP1 A B 70 17.499 -46.545 -23.146 1.00 51.11 O
ATOM 26 OP2 A B 70 18.938 -46.857 -21.054 1.00 51.24 O
ATOM 27 O5' A B 70 16.825 -45.567 -20.998 1.00 51.65 O
TER

Atoms:
C4: (16.821,-56.946,-22.564)
N3: (16.538,-56.060,-23.590)
OP1: (12.283,-63.812,-23.541)
OP2: (13.878,-62.079,-22.500)
C2: (15.573,-56.194,-24.559)
C1': (13.825,-57.644,-25.525)
C3': (14.734,-59.452,-26.705)
O5': (12.597,-61.605,-24.611)
O4': (13.123,-58.805,-25.130)
C5': (13.779,-61.136,-25.186)
P: (12.624,-62.396,-23.241)
C4': (13.494,-59.913,-25.992)
C2': (14.453,-57.978,-26.883)
O2': (13.529,-57.790,-27.939)
N1: (14.822,-57.368,-24.479)
O4: (17.814,-56.750,-21.847)
O2: (15.396,-55.338,-25.414)
C6: (15.024,-58.266,-23.456)
C5: (15.968,-58.102,-22.524)
O3': (14.761,-60.172,-27.919)
OP1: (19.524,-51.650,-22.871)
OP2: (17.788,-53.492,-23.173)
C3': (16.744,-49.294,-21.937)
C1': (14.562,-49.878,-22.734)
C5': (17.733,-49.876,-24.210)
O4': (15.358,-49.666,-23.868)
C8: (13.963,-52.345,-22.542)
O2': (14.852,-49.497,-20.383)
C6: (10.770,-52.617,-23.950)
C5: (12.029,-52.350,-23.418)
C4: (12.478,-51.049,-23.498)
P: (18.541,-52.349,-23.729)
C4': (16.639,-49.145,-23.454)
C2': (15.469,-50.016,-21.521)
C2: (10.664,-50.384,-24.528)
N1: (10.101,-51.595,-24.525)
N3: (11.834,-50.002,-24.037)
N6: (10.199,-53.818,-23.911)
N7: (12.978,-53.161,-22.811)
N9: (13.721,-51.050,-22.922)
O5': (17.459,-51.279,-24.201)
O3': (16.694,-48.029,-21.245)
Image (generated by PyMOL):
PyMOL image
show in jmol