Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A613:A616
Extra
PDB:
ATOM 1 O3' U A 612 50.824 108.188 86.081 1.00 33.38 O
ATOM 2 P U A 613 50.529 106.610 86.247 1.00 35.64 P
ATOM 3 OP1 U A 613 51.824 105.959 85.936 1.00 36.00 O
ATOM 4 OP2 U A 613 49.313 106.205 85.505 1.00 34.08 O
ATOM 5 O5' U A 613 50.246 106.373 87.797 1.00 34.53 O
ATOM 6 C5' U A 613 51.298 106.538 88.764 1.00 33.63 C
ATOM 7 C4' U A 613 50.739 106.518 90.171 1.00 33.87 C
ATOM 8 O4' U A 613 49.664 107.489 90.288 1.00 34.10 O
ATOM 9 C3' U A 613 50.014 105.266 90.635 1.00 32.98 C
ATOM 10 O3' U A 613 50.910 104.172 90.865 1.00 30.74 O
ATOM 11 C2' U A 613 49.326 105.793 91.897 1.00 32.89 C
ATOM 12 O2' U A 613 50.207 106.011 92.979 1.00 33.48 O
ATOM 13 C1' U A 613 48.904 107.192 91.446 1.00 33.73 C
ATOM 14 N1 U A 613 47.469 107.272 91.140 1.00 35.20 N
ATOM 15 C2 U A 613 46.592 107.403 92.210 1.00 35.56 C
ATOM 16 O2 U A 613 46.961 107.507 93.370 1.00 38.07 O
ATOM 17 N3 U A 613 45.264 107.409 91.870 1.00 35.38 N
ATOM 18 C4 U A 613 44.725 107.313 90.609 1.00 36.51 C
ATOM 19 O4 U A 613 43.502 107.294 90.481 1.00 36.45 O
ATOM 20 C5 U A 613 45.685 107.211 89.555 1.00 37.04 C
ATOM 21 C6 U A 613 46.995 107.196 89.849 1.00 35.92 C
ATOM 22 P U A 614 50.418 102.662 90.586 1.00 30.90 P
ATOM 23 OP1 U A 614 51.520 101.695 90.817 1.00 29.99 O
ATOM 24 OP2 U A 614 49.670 102.602 89.316 1.00 29.30 O
ATOM 25 O5' U A 614 49.364 102.434 91.740 1.00 29.82 O
TER
ATOM 1 O3' G B 615 43.187 106.742 96.370 1.00 29.22 O
ATOM 2 P A B 616 42.583 107.591 95.161 1.00 27.83 P
ATOM 3 OP1 A B 616 41.126 107.547 95.327 1.00 26.59 O
ATOM 4 OP2 A B 616 43.191 107.147 93.896 1.00 27.82 O
ATOM 5 O5' A B 616 43.065 109.061 95.499 1.00 28.99 O
ATOM 6 C5' A B 616 42.520 109.735 96.623 1.00 31.46 C
ATOM 7 C4' A B 616 42.549 111.220 96.424 1.00 32.11 C
ATOM 8 O4' A B 616 43.931 111.657 96.407 1.00 34.12 O
ATOM 9 C3' A B 616 41.884 111.799 95.187 1.00 31.78 C
ATOM 10 O3' A B 616 41.175 112.966 95.587 1.00 30.19 O
ATOM 11 C2' A B 616 43.088 112.144 94.304 1.00 33.68 C
ATOM 12 O2' A B 616 42.871 113.212 93.410 1.00 35.87 O
ATOM 13 C1' A B 616 44.142 112.537 95.336 1.00 34.36 C
ATOM 14 N9 A B 616 45.534 112.382 94.912 1.00 36.10 N
ATOM 15 C8 A B 616 46.005 111.901 93.717 1.00 36.04 C
ATOM 16 N7 A B 616 47.314 111.835 93.653 1.00 35.94 N
ATOM 17 C5 A B 616 47.737 112.314 94.886 1.00 35.30 C
ATOM 18 C6 A B 616 49.011 112.472 95.449 1.00 34.80 C
ATOM 19 N6 A B 616 50.133 112.182 94.801 1.00 33.99 N
ATOM 20 N1 A B 616 49.094 112.950 96.711 1.00 33.85 N
ATOM 21 C2 A B 616 47.962 113.260 97.350 1.00 36.07 C
ATOM 22 N3 A B 616 46.699 113.163 96.928 1.00 36.89 N
ATOM 23 C4 A B 616 46.654 112.671 95.670 1.00 36.67 C
ATOM 24 P A B 617 39.599 112.882 95.901 1.00 28.17 P
ATOM 25 OP1 A B 617 39.330 111.755 96.809 1.00 27.86 O
ATOM 26 OP2 A B 617 38.863 112.989 94.636 1.00 26.52 O
ATOM 27 O5' A B 617 39.286 114.225 96.689 1.00 27.94 O
TER
ATOM 2 P U A 613 50.529 106.610 86.247 1.00 35.64 P
ATOM 3 OP1 U A 613 51.824 105.959 85.936 1.00 36.00 O
ATOM 4 OP2 U A 613 49.313 106.205 85.505 1.00 34.08 O
ATOM 5 O5' U A 613 50.246 106.373 87.797 1.00 34.53 O
ATOM 6 C5' U A 613 51.298 106.538 88.764 1.00 33.63 C
ATOM 7 C4' U A 613 50.739 106.518 90.171 1.00 33.87 C
ATOM 8 O4' U A 613 49.664 107.489 90.288 1.00 34.10 O
ATOM 9 C3' U A 613 50.014 105.266 90.635 1.00 32.98 C
ATOM 10 O3' U A 613 50.910 104.172 90.865 1.00 30.74 O
ATOM 11 C2' U A 613 49.326 105.793 91.897 1.00 32.89 C
ATOM 12 O2' U A 613 50.207 106.011 92.979 1.00 33.48 O
ATOM 13 C1' U A 613 48.904 107.192 91.446 1.00 33.73 C
ATOM 14 N1 U A 613 47.469 107.272 91.140 1.00 35.20 N
ATOM 15 C2 U A 613 46.592 107.403 92.210 1.00 35.56 C
ATOM 16 O2 U A 613 46.961 107.507 93.370 1.00 38.07 O
ATOM 17 N3 U A 613 45.264 107.409 91.870 1.00 35.38 N
ATOM 18 C4 U A 613 44.725 107.313 90.609 1.00 36.51 C
ATOM 19 O4 U A 613 43.502 107.294 90.481 1.00 36.45 O
ATOM 20 C5 U A 613 45.685 107.211 89.555 1.00 37.04 C
ATOM 21 C6 U A 613 46.995 107.196 89.849 1.00 35.92 C
ATOM 22 P U A 614 50.418 102.662 90.586 1.00 30.90 P
ATOM 23 OP1 U A 614 51.520 101.695 90.817 1.00 29.99 O
ATOM 24 OP2 U A 614 49.670 102.602 89.316 1.00 29.30 O
ATOM 25 O5' U A 614 49.364 102.434 91.740 1.00 29.82 O
TER
ATOM 1 O3' G B 615 43.187 106.742 96.370 1.00 29.22 O
ATOM 2 P A B 616 42.583 107.591 95.161 1.00 27.83 P
ATOM 3 OP1 A B 616 41.126 107.547 95.327 1.00 26.59 O
ATOM 4 OP2 A B 616 43.191 107.147 93.896 1.00 27.82 O
ATOM 5 O5' A B 616 43.065 109.061 95.499 1.00 28.99 O
ATOM 6 C5' A B 616 42.520 109.735 96.623 1.00 31.46 C
ATOM 7 C4' A B 616 42.549 111.220 96.424 1.00 32.11 C
ATOM 8 O4' A B 616 43.931 111.657 96.407 1.00 34.12 O
ATOM 9 C3' A B 616 41.884 111.799 95.187 1.00 31.78 C
ATOM 10 O3' A B 616 41.175 112.966 95.587 1.00 30.19 O
ATOM 11 C2' A B 616 43.088 112.144 94.304 1.00 33.68 C
ATOM 12 O2' A B 616 42.871 113.212 93.410 1.00 35.87 O
ATOM 13 C1' A B 616 44.142 112.537 95.336 1.00 34.36 C
ATOM 14 N9 A B 616 45.534 112.382 94.912 1.00 36.10 N
ATOM 15 C8 A B 616 46.005 111.901 93.717 1.00 36.04 C
ATOM 16 N7 A B 616 47.314 111.835 93.653 1.00 35.94 N
ATOM 17 C5 A B 616 47.737 112.314 94.886 1.00 35.30 C
ATOM 18 C6 A B 616 49.011 112.472 95.449 1.00 34.80 C
ATOM 19 N6 A B 616 50.133 112.182 94.801 1.00 33.99 N
ATOM 20 N1 A B 616 49.094 112.950 96.711 1.00 33.85 N
ATOM 21 C2 A B 616 47.962 113.260 97.350 1.00 36.07 C
ATOM 22 N3 A B 616 46.699 113.163 96.928 1.00 36.89 N
ATOM 23 C4 A B 616 46.654 112.671 95.670 1.00 36.67 C
ATOM 24 P A B 617 39.599 112.882 95.901 1.00 28.17 P
ATOM 25 OP1 A B 617 39.330 111.755 96.809 1.00 27.86 O
ATOM 26 OP2 A B 617 38.863 112.989 94.636 1.00 26.52 O
ATOM 27 O5' A B 617 39.286 114.225 96.689 1.00 27.94 O
TER
Atoms:
C4: (44.725,107.313,90.609)
N3: (45.264,107.409,91.870)
OP1: (51.824,105.959,85.936)
OP2: (49.313,106.205,85.505)
C2: (46.592,107.403,92.210)
C1': (48.904,107.192,91.446)
C3': (50.014,105.266,90.635)
O5': (50.246,106.373,87.797)
O4': (49.664,107.489,90.288)
C5': (51.298,106.538,88.764)
P: (50.529,106.610,86.247)
C4': (50.739,106.518,90.171)
C2': (49.326,105.793,91.897)
O2': (50.207,106.011,92.979)
N1: (47.469,107.272,91.140)
O4: (43.502,107.294,90.481)
O2: (46.961,107.507,93.370)
C6: (46.995,107.196,89.849)
C5: (45.685,107.211,89.555)
O3': (50.910,104.172,90.865)
N3: (45.264,107.409,91.870)
OP1: (51.824,105.959,85.936)
OP2: (49.313,106.205,85.505)
C2: (46.592,107.403,92.210)
C1': (48.904,107.192,91.446)
C3': (50.014,105.266,90.635)
O5': (50.246,106.373,87.797)
O4': (49.664,107.489,90.288)
C5': (51.298,106.538,88.764)
P: (50.529,106.610,86.247)
C4': (50.739,106.518,90.171)
C2': (49.326,105.793,91.897)
O2': (50.207,106.011,92.979)
N1: (47.469,107.272,91.140)
O4: (43.502,107.294,90.481)
O2: (46.961,107.507,93.370)
C6: (46.995,107.196,89.849)
C5: (45.685,107.211,89.555)
O3': (50.910,104.172,90.865)
OP1: (41.126,107.547,95.327)
OP2: (43.191,107.147,93.896)
C3': (41.884,111.799,95.187)
C1': (44.142,112.537,95.336)
C5': (42.520,109.735,96.623)
O4': (43.931,111.657,96.407)
C8: (46.005,111.901,93.717)
O2': (42.871,113.212,93.410)
C6: (49.011,112.472,95.449)
C5: (47.737,112.314,94.886)
C4: (46.654,112.671,95.670)
P: (42.583,107.591,95.161)
C4': (42.549,111.220,96.424)
C2': (43.088,112.144,94.304)
C2: (47.962,113.260,97.350)
N1: (49.094,112.950,96.711)
N3: (46.699,113.163,96.928)
N6: (50.133,112.182,94.801)
N7: (47.314,111.835,93.653)
N9: (45.534,112.382,94.912)
O5': (43.065,109.061,95.499)
O3': (41.175,112.966,95.587)
OP2: (43.191,107.147,93.896)
C3': (41.884,111.799,95.187)
C1': (44.142,112.537,95.336)
C5': (42.520,109.735,96.623)
O4': (43.931,111.657,96.407)
C8: (46.005,111.901,93.717)
O2': (42.871,113.212,93.410)
C6: (49.011,112.472,95.449)
C5: (47.737,112.314,94.886)
C4: (46.654,112.671,95.670)
P: (42.583,107.591,95.161)
C4': (42.549,111.220,96.424)
C2': (43.088,112.144,94.304)
C2: (47.962,113.260,97.350)
N1: (49.094,112.950,96.711)
N3: (46.699,113.163,96.928)
N6: (50.133,112.182,94.801)
N7: (47.314,111.835,93.653)
N9: (45.534,112.382,94.912)
O5': (43.065,109.061,95.499)
O3': (41.175,112.966,95.587)
Image (generated by PyMOL):