Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1Y39:C15:C18
Extra
PDB:
ATOM 1 O3' U A 14 117.685 85.581 5.394 1.00 61.79 O
ATOM 2 P U A 15 118.994 85.166 6.242 1.00 61.19 P
ATOM 3 OP1 U A 15 120.147 85.240 5.303 1.00 60.96 O
ATOM 4 OP2 U A 15 118.702 83.893 6.945 1.00 60.04 O
ATOM 5 O5' U A 15 119.152 86.334 7.320 1.00 59.49 O
ATOM 6 C5' U A 15 119.683 87.596 6.930 1.00 57.41 C
ATOM 7 C4' U A 15 119.541 88.605 8.040 1.00 56.84 C
ATOM 8 O4' U A 15 118.143 88.737 8.397 1.00 57.30 O
ATOM 9 C3' U A 15 120.209 88.276 9.365 1.00 57.16 C
ATOM 10 O3' U A 15 121.608 88.579 9.331 1.00 57.26 O
ATOM 11 C2' U A 15 119.464 89.208 10.317 1.00 56.72 C
ATOM 12 O2' U A 15 119.936 90.535 10.292 1.00 56.86 O
ATOM 13 C1' U A 15 118.043 89.157 9.749 1.00 56.87 C
ATOM 14 N1 U A 15 117.234 88.186 10.491 1.00 57.15 N
ATOM 15 C2 U A 15 116.703 88.599 11.705 1.00 57.59 C
ATOM 16 O2 U A 15 116.834 89.738 12.131 1.00 59.07 O
ATOM 17 N3 U A 15 116.022 87.633 12.403 1.00 56.87 N
ATOM 18 C4 U A 15 115.818 86.324 12.016 1.00 58.08 C
ATOM 19 O4 U A 15 115.284 85.536 12.803 1.00 59.42 O
ATOM 20 C5 U A 15 116.366 85.986 10.729 1.00 58.38 C
ATOM 21 C6 U A 15 117.036 86.908 10.027 1.00 57.41 C
ATOM 22 P A A 16 122.679 87.584 10.027 1.00 54.74 P
ATOM 23 OP1 A A 16 123.994 87.904 9.402 1.00 55.93 O
ATOM 24 OP2 A A 16 122.153 86.200 9.959 1.00 51.62 O
ATOM 25 O5' A A 16 122.707 88.033 11.556 1.00 51.92 O
TER
ATOM 1 O3' G B 17 115.610 90.029 16.670 1.00 58.08 O
ATOM 2 P A B 18 114.568 89.125 15.848 1.00 60.87 P
ATOM 3 OP1 A B 18 113.553 88.577 16.788 1.00 59.35 O
ATOM 4 OP2 A B 18 115.379 88.187 15.012 1.00 60.04 O
ATOM 5 O5' A B 18 113.867 90.177 14.873 1.00 61.39 O
ATOM 6 C5' A B 18 113.255 91.362 15.379 1.00 62.38 C
ATOM 7 C4' A B 18 112.780 92.237 14.240 1.00 63.45 C
ATOM 8 O4' A B 18 113.840 93.121 13.769 1.00 64.54 O
ATOM 9 C3' A B 18 112.276 91.496 12.997 1.00 64.14 C
ATOM 10 O3' A B 18 111.204 92.240 12.414 1.00 64.75 O
ATOM 11 C2' A B 18 113.479 91.598 12.066 1.00 64.01 C
ATOM 12 O2' A B 18 113.171 91.445 10.698 1.00 63.91 O
ATOM 13 C1' A B 18 113.891 93.031 12.363 1.00 64.30 C
ATOM 14 N9 A B 18 115.174 93.508 11.850 1.00 64.39 N
ATOM 15 C8 A B 18 116.215 92.819 11.274 1.00 63.35 C
ATOM 16 N7 A B 18 117.152 93.600 10.783 1.00 63.39 N
ATOM 17 C5 A B 18 116.713 94.885 11.088 1.00 62.93 C
ATOM 18 C6 A B 18 117.240 96.172 10.815 1.00 62.67 C
ATOM 19 N6 A B 18 118.366 96.395 10.134 1.00 62.98 N
ATOM 20 N1 A B 18 116.549 97.240 11.264 1.00 62.11 N
ATOM 21 C2 A B 18 115.413 97.030 11.936 1.00 63.35 C
ATOM 22 N3 A B 18 114.812 95.880 12.246 1.00 63.16 N
ATOM 23 C4 A B 18 115.519 94.837 11.781 1.00 63.49 C
ATOM 24 P A B 19 109.723 91.622 12.381 1.00 64.46 P
ATOM 25 OP1 A B 19 109.850 90.165 12.111 1.00 65.11 O
ATOM 26 OP2 A B 19 108.872 92.461 11.489 1.00 66.21 O
ATOM 27 O5' A B 19 109.210 91.793 13.880 1.00 64.94 O
TER
ATOM 2 P U A 15 118.994 85.166 6.242 1.00 61.19 P
ATOM 3 OP1 U A 15 120.147 85.240 5.303 1.00 60.96 O
ATOM 4 OP2 U A 15 118.702 83.893 6.945 1.00 60.04 O
ATOM 5 O5' U A 15 119.152 86.334 7.320 1.00 59.49 O
ATOM 6 C5' U A 15 119.683 87.596 6.930 1.00 57.41 C
ATOM 7 C4' U A 15 119.541 88.605 8.040 1.00 56.84 C
ATOM 8 O4' U A 15 118.143 88.737 8.397 1.00 57.30 O
ATOM 9 C3' U A 15 120.209 88.276 9.365 1.00 57.16 C
ATOM 10 O3' U A 15 121.608 88.579 9.331 1.00 57.26 O
ATOM 11 C2' U A 15 119.464 89.208 10.317 1.00 56.72 C
ATOM 12 O2' U A 15 119.936 90.535 10.292 1.00 56.86 O
ATOM 13 C1' U A 15 118.043 89.157 9.749 1.00 56.87 C
ATOM 14 N1 U A 15 117.234 88.186 10.491 1.00 57.15 N
ATOM 15 C2 U A 15 116.703 88.599 11.705 1.00 57.59 C
ATOM 16 O2 U A 15 116.834 89.738 12.131 1.00 59.07 O
ATOM 17 N3 U A 15 116.022 87.633 12.403 1.00 56.87 N
ATOM 18 C4 U A 15 115.818 86.324 12.016 1.00 58.08 C
ATOM 19 O4 U A 15 115.284 85.536 12.803 1.00 59.42 O
ATOM 20 C5 U A 15 116.366 85.986 10.729 1.00 58.38 C
ATOM 21 C6 U A 15 117.036 86.908 10.027 1.00 57.41 C
ATOM 22 P A A 16 122.679 87.584 10.027 1.00 54.74 P
ATOM 23 OP1 A A 16 123.994 87.904 9.402 1.00 55.93 O
ATOM 24 OP2 A A 16 122.153 86.200 9.959 1.00 51.62 O
ATOM 25 O5' A A 16 122.707 88.033 11.556 1.00 51.92 O
TER
ATOM 1 O3' G B 17 115.610 90.029 16.670 1.00 58.08 O
ATOM 2 P A B 18 114.568 89.125 15.848 1.00 60.87 P
ATOM 3 OP1 A B 18 113.553 88.577 16.788 1.00 59.35 O
ATOM 4 OP2 A B 18 115.379 88.187 15.012 1.00 60.04 O
ATOM 5 O5' A B 18 113.867 90.177 14.873 1.00 61.39 O
ATOM 6 C5' A B 18 113.255 91.362 15.379 1.00 62.38 C
ATOM 7 C4' A B 18 112.780 92.237 14.240 1.00 63.45 C
ATOM 8 O4' A B 18 113.840 93.121 13.769 1.00 64.54 O
ATOM 9 C3' A B 18 112.276 91.496 12.997 1.00 64.14 C
ATOM 10 O3' A B 18 111.204 92.240 12.414 1.00 64.75 O
ATOM 11 C2' A B 18 113.479 91.598 12.066 1.00 64.01 C
ATOM 12 O2' A B 18 113.171 91.445 10.698 1.00 63.91 O
ATOM 13 C1' A B 18 113.891 93.031 12.363 1.00 64.30 C
ATOM 14 N9 A B 18 115.174 93.508 11.850 1.00 64.39 N
ATOM 15 C8 A B 18 116.215 92.819 11.274 1.00 63.35 C
ATOM 16 N7 A B 18 117.152 93.600 10.783 1.00 63.39 N
ATOM 17 C5 A B 18 116.713 94.885 11.088 1.00 62.93 C
ATOM 18 C6 A B 18 117.240 96.172 10.815 1.00 62.67 C
ATOM 19 N6 A B 18 118.366 96.395 10.134 1.00 62.98 N
ATOM 20 N1 A B 18 116.549 97.240 11.264 1.00 62.11 N
ATOM 21 C2 A B 18 115.413 97.030 11.936 1.00 63.35 C
ATOM 22 N3 A B 18 114.812 95.880 12.246 1.00 63.16 N
ATOM 23 C4 A B 18 115.519 94.837 11.781 1.00 63.49 C
ATOM 24 P A B 19 109.723 91.622 12.381 1.00 64.46 P
ATOM 25 OP1 A B 19 109.850 90.165 12.111 1.00 65.11 O
ATOM 26 OP2 A B 19 108.872 92.461 11.489 1.00 66.21 O
ATOM 27 O5' A B 19 109.210 91.793 13.880 1.00 64.94 O
TER
Atoms:
C4: (115.818,86.324,12.016)
N3: (116.022,87.633,12.403)
OP1: (120.147,85.240,5.303)
OP2: (118.702,83.893,6.945)
C2: (116.703,88.599,11.705)
C1': (118.043,89.157,9.749)
C3': (120.209,88.276,9.365)
O5': (119.152,86.334,7.320)
O4': (118.143,88.737,8.397)
C5': (119.683,87.596,6.930)
P: (118.994,85.166,6.242)
C4': (119.541,88.605,8.040)
C2': (119.464,89.208,10.317)
O2': (119.936,90.535,10.292)
N1: (117.234,88.186,10.491)
O4: (115.284,85.536,12.803)
O2: (116.834,89.738,12.131)
C6: (117.036,86.908,10.027)
C5: (116.366,85.986,10.729)
O3': (121.608,88.579,9.331)
N3: (116.022,87.633,12.403)
OP1: (120.147,85.240,5.303)
OP2: (118.702,83.893,6.945)
C2: (116.703,88.599,11.705)
C1': (118.043,89.157,9.749)
C3': (120.209,88.276,9.365)
O5': (119.152,86.334,7.320)
O4': (118.143,88.737,8.397)
C5': (119.683,87.596,6.930)
P: (118.994,85.166,6.242)
C4': (119.541,88.605,8.040)
C2': (119.464,89.208,10.317)
O2': (119.936,90.535,10.292)
N1: (117.234,88.186,10.491)
O4: (115.284,85.536,12.803)
O2: (116.834,89.738,12.131)
C6: (117.036,86.908,10.027)
C5: (116.366,85.986,10.729)
O3': (121.608,88.579,9.331)
OP1: (113.553,88.577,16.788)
OP2: (115.379,88.187,15.012)
C3': (112.276,91.496,12.997)
C1': (113.891,93.031,12.363)
C5': (113.255,91.362,15.379)
O4': (113.840,93.121,13.769)
C8: (116.215,92.819,11.274)
O2': (113.171,91.445,10.698)
C6: (117.240,96.172,10.815)
C5: (116.713,94.885,11.088)
C4: (115.519,94.837,11.781)
P: (114.568,89.125,15.848)
C4': (112.780,92.237,14.240)
C2': (113.479,91.598,12.066)
C2: (115.413,97.030,11.936)
N1: (116.549,97.240,11.264)
N3: (114.812,95.880,12.246)
N6: (118.366,96.395,10.134)
N7: (117.152,93.600,10.783)
N9: (115.174,93.508,11.850)
O5': (113.867,90.177,14.873)
O3': (111.204,92.240,12.414)
OP2: (115.379,88.187,15.012)
C3': (112.276,91.496,12.997)
C1': (113.891,93.031,12.363)
C5': (113.255,91.362,15.379)
O4': (113.840,93.121,13.769)
C8: (116.215,92.819,11.274)
O2': (113.171,91.445,10.698)
C6: (117.240,96.172,10.815)
C5: (116.713,94.885,11.088)
C4: (115.519,94.837,11.781)
P: (114.568,89.125,15.848)
C4': (112.780,92.237,14.240)
C2': (113.479,91.598,12.066)
C2: (115.413,97.030,11.936)
N1: (116.549,97.240,11.264)
N3: (114.812,95.880,12.246)
N6: (118.366,96.395,10.134)
N7: (117.152,93.600,10.783)
N9: (115.174,93.508,11.850)
O5': (113.867,90.177,14.873)
O3': (111.204,92.240,12.414)
Image (generated by PyMOL):