Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1248:A2053
Extra
PDB:
ATOM 1 O3' A A1247 -70.119 -74.100 20.991 1.00 0.01 O
ATOM 2 P U A1248 -68.986 -73.058 20.752 1.00 0.01 P
ATOM 3 OP1 U A1248 -68.421 -72.759 22.043 1.00 0.01 O
ATOM 4 OP2 U A1248 -69.554 -71.959 19.961 1.00 0.01 O
ATOM 5 O5' U A1248 -67.958 -73.869 19.890 1.00 0.01 O
ATOM 6 C5' U A1248 -68.241 -74.200 18.558 1.00 0.01 C
ATOM 7 C4' U A1248 -67.249 -73.583 17.620 1.00 0.01 C
ATOM 8 O4' U A1248 -67.667 -72.272 17.251 1.00 0.01 O
ATOM 9 C3' U A1248 -65.867 -73.364 18.158 1.00 0.01 C
ATOM 10 O3' U A1248 -65.118 -74.539 18.146 1.00 0.01 O
ATOM 11 C2' U A1248 -65.315 -72.297 17.228 1.00 0.01 C
ATOM 12 O2' U A1248 -64.727 -72.872 16.102 1.00 0.01 O
ATOM 13 C1' U A1248 -66.563 -71.568 16.778 1.00 0.01 C
ATOM 14 N1 U A1248 -66.608 -70.209 17.272 1.00 0.01 N
ATOM 15 C2 U A1248 -66.151 -69.320 16.391 1.00 0.01 C
ATOM 16 O2 U A1248 -65.760 -69.713 15.324 1.00 0.01 O
ATOM 17 N3 U A1248 -66.164 -68.041 16.819 1.00 0.01 N
ATOM 18 C4 U A1248 -66.574 -67.621 18.022 1.00 0.01 C
ATOM 19 O4 U A1248 -66.541 -66.469 18.284 1.00 0.01 O
ATOM 20 C5 U A1248 -67.010 -68.578 18.900 1.00 0.01 C
ATOM 21 C6 U A1248 -67.011 -69.829 18.500 1.00 0.01 C
ATOM 22 P G A1249 -63.907 -74.729 19.131 1.00 0.01 P
ATOM 23 OP1 G A1249 -62.925 -73.699 18.818 1.00 0.01 O
ATOM 24 OP2 G A1249 -63.495 -76.130 19.060 1.00 0.01 O
ATOM 25 O5' G A1249 -64.575 -74.450 20.512 1.00 0.01 O
TER
ATOM 1 O3' A B2052 -65.141 -63.569 14.238 1.00 0.01 O
ATOM 2 P A B2053 -65.853 -64.633 15.181 1.00 0.01 P
ATOM 3 OP1 A B2053 -65.820 -64.084 16.558 1.00 0.01 O
ATOM 4 OP2 A B2053 -65.234 -65.929 14.935 1.00 0.01 O
ATOM 5 O5' A B2053 -67.320 -64.640 14.638 1.00 0.01 O
ATOM 6 C5' A B2053 -68.286 -65.469 15.235 1.00 0.01 C
ATOM 7 C4' A B2053 -69.659 -65.216 14.688 1.00 0.01 C
ATOM 8 O4' A B2053 -70.516 -66.307 15.098 1.00 0.01 O
ATOM 9 C3' A B2053 -70.318 -63.986 15.225 1.00 0.01 C
ATOM 10 O3' A B2053 -71.395 -63.627 14.383 1.00 0.01 O
ATOM 11 C2' A B2053 -70.865 -64.511 16.502 1.00 0.01 C
ATOM 12 O2' A B2053 -71.842 -63.710 17.083 1.00 0.01 O
ATOM 13 C1' A B2053 -71.436 -65.831 16.026 1.00 0.01 C
ATOM 14 N9 A B2053 -71.567 -66.803 17.090 1.00 0.01 N
ATOM 15 C8 A B2053 -70.606 -67.426 17.805 1.00 0.01 C
ATOM 16 N7 A B2053 -71.095 -68.176 18.754 1.00 0.01 N
ATOM 17 C5 A B2053 -72.450 -67.997 18.658 1.00 0.01 C
ATOM 18 C6 A B2053 -73.511 -68.492 19.392 1.00 0.01 C
ATOM 19 N6 A B2053 -73.413 -69.329 20.415 1.00 0.01 N
ATOM 20 N1 A B2053 -74.716 -68.086 19.018 1.00 0.01 N
ATOM 21 C2 A B2053 -74.826 -67.257 17.991 1.00 0.01 C
ATOM 22 N3 A B2053 -73.912 -66.722 17.229 1.00 0.01 N
ATOM 23 C4 A B2053 -72.743 -67.148 17.640 1.00 0.01 C
ATOM 24 P G B2054 -71.762 -62.090 14.176 1.00 0.01 P
ATOM 25 OP1 G B2054 -70.600 -61.459 13.562 1.00 0.01 O
ATOM 26 OP2 G B2054 -72.245 -61.570 15.441 1.00 0.01 O
ATOM 27 O5' G B2054 -72.940 -62.128 13.137 1.00 0.01 O
TER
ATOM 2 P U A1248 -68.986 -73.058 20.752 1.00 0.01 P
ATOM 3 OP1 U A1248 -68.421 -72.759 22.043 1.00 0.01 O
ATOM 4 OP2 U A1248 -69.554 -71.959 19.961 1.00 0.01 O
ATOM 5 O5' U A1248 -67.958 -73.869 19.890 1.00 0.01 O
ATOM 6 C5' U A1248 -68.241 -74.200 18.558 1.00 0.01 C
ATOM 7 C4' U A1248 -67.249 -73.583 17.620 1.00 0.01 C
ATOM 8 O4' U A1248 -67.667 -72.272 17.251 1.00 0.01 O
ATOM 9 C3' U A1248 -65.867 -73.364 18.158 1.00 0.01 C
ATOM 10 O3' U A1248 -65.118 -74.539 18.146 1.00 0.01 O
ATOM 11 C2' U A1248 -65.315 -72.297 17.228 1.00 0.01 C
ATOM 12 O2' U A1248 -64.727 -72.872 16.102 1.00 0.01 O
ATOM 13 C1' U A1248 -66.563 -71.568 16.778 1.00 0.01 C
ATOM 14 N1 U A1248 -66.608 -70.209 17.272 1.00 0.01 N
ATOM 15 C2 U A1248 -66.151 -69.320 16.391 1.00 0.01 C
ATOM 16 O2 U A1248 -65.760 -69.713 15.324 1.00 0.01 O
ATOM 17 N3 U A1248 -66.164 -68.041 16.819 1.00 0.01 N
ATOM 18 C4 U A1248 -66.574 -67.621 18.022 1.00 0.01 C
ATOM 19 O4 U A1248 -66.541 -66.469 18.284 1.00 0.01 O
ATOM 20 C5 U A1248 -67.010 -68.578 18.900 1.00 0.01 C
ATOM 21 C6 U A1248 -67.011 -69.829 18.500 1.00 0.01 C
ATOM 22 P G A1249 -63.907 -74.729 19.131 1.00 0.01 P
ATOM 23 OP1 G A1249 -62.925 -73.699 18.818 1.00 0.01 O
ATOM 24 OP2 G A1249 -63.495 -76.130 19.060 1.00 0.01 O
ATOM 25 O5' G A1249 -64.575 -74.450 20.512 1.00 0.01 O
TER
ATOM 1 O3' A B2052 -65.141 -63.569 14.238 1.00 0.01 O
ATOM 2 P A B2053 -65.853 -64.633 15.181 1.00 0.01 P
ATOM 3 OP1 A B2053 -65.820 -64.084 16.558 1.00 0.01 O
ATOM 4 OP2 A B2053 -65.234 -65.929 14.935 1.00 0.01 O
ATOM 5 O5' A B2053 -67.320 -64.640 14.638 1.00 0.01 O
ATOM 6 C5' A B2053 -68.286 -65.469 15.235 1.00 0.01 C
ATOM 7 C4' A B2053 -69.659 -65.216 14.688 1.00 0.01 C
ATOM 8 O4' A B2053 -70.516 -66.307 15.098 1.00 0.01 O
ATOM 9 C3' A B2053 -70.318 -63.986 15.225 1.00 0.01 C
ATOM 10 O3' A B2053 -71.395 -63.627 14.383 1.00 0.01 O
ATOM 11 C2' A B2053 -70.865 -64.511 16.502 1.00 0.01 C
ATOM 12 O2' A B2053 -71.842 -63.710 17.083 1.00 0.01 O
ATOM 13 C1' A B2053 -71.436 -65.831 16.026 1.00 0.01 C
ATOM 14 N9 A B2053 -71.567 -66.803 17.090 1.00 0.01 N
ATOM 15 C8 A B2053 -70.606 -67.426 17.805 1.00 0.01 C
ATOM 16 N7 A B2053 -71.095 -68.176 18.754 1.00 0.01 N
ATOM 17 C5 A B2053 -72.450 -67.997 18.658 1.00 0.01 C
ATOM 18 C6 A B2053 -73.511 -68.492 19.392 1.00 0.01 C
ATOM 19 N6 A B2053 -73.413 -69.329 20.415 1.00 0.01 N
ATOM 20 N1 A B2053 -74.716 -68.086 19.018 1.00 0.01 N
ATOM 21 C2 A B2053 -74.826 -67.257 17.991 1.00 0.01 C
ATOM 22 N3 A B2053 -73.912 -66.722 17.229 1.00 0.01 N
ATOM 23 C4 A B2053 -72.743 -67.148 17.640 1.00 0.01 C
ATOM 24 P G B2054 -71.762 -62.090 14.176 1.00 0.01 P
ATOM 25 OP1 G B2054 -70.600 -61.459 13.562 1.00 0.01 O
ATOM 26 OP2 G B2054 -72.245 -61.570 15.441 1.00 0.01 O
ATOM 27 O5' G B2054 -72.940 -62.128 13.137 1.00 0.01 O
TER
Atoms:
C4: (-66.574,-67.621,18.022)
N3: (-66.164,-68.041,16.819)
OP1: (-68.421,-72.759,22.043)
OP2: (-69.554,-71.959,19.961)
C2: (-66.151,-69.320,16.391)
C1': (-66.563,-71.568,16.778)
C3': (-65.867,-73.364,18.158)
O5': (-67.958,-73.869,19.890)
O4': (-67.667,-72.272,17.251)
C5': (-68.241,-74.200,18.558)
P: (-68.986,-73.058,20.752)
C4': (-67.249,-73.583,17.620)
C2': (-65.315,-72.297,17.228)
O2': (-64.727,-72.872,16.102)
N1: (-66.608,-70.209,17.272)
O4: (-66.541,-66.469,18.284)
O2: (-65.760,-69.713,15.324)
C6: (-67.011,-69.829,18.500)
C5: (-67.010,-68.578,18.900)
O3': (-65.118,-74.539,18.146)
N3: (-66.164,-68.041,16.819)
OP1: (-68.421,-72.759,22.043)
OP2: (-69.554,-71.959,19.961)
C2: (-66.151,-69.320,16.391)
C1': (-66.563,-71.568,16.778)
C3': (-65.867,-73.364,18.158)
O5': (-67.958,-73.869,19.890)
O4': (-67.667,-72.272,17.251)
C5': (-68.241,-74.200,18.558)
P: (-68.986,-73.058,20.752)
C4': (-67.249,-73.583,17.620)
C2': (-65.315,-72.297,17.228)
O2': (-64.727,-72.872,16.102)
N1: (-66.608,-70.209,17.272)
O4: (-66.541,-66.469,18.284)
O2: (-65.760,-69.713,15.324)
C6: (-67.011,-69.829,18.500)
C5: (-67.010,-68.578,18.900)
O3': (-65.118,-74.539,18.146)
OP1: (-65.820,-64.084,16.558)
OP2: (-65.234,-65.929,14.935)
C3': (-70.318,-63.986,15.225)
C1': (-71.436,-65.831,16.026)
C5': (-68.286,-65.469,15.235)
O4': (-70.516,-66.307,15.098)
C8: (-70.606,-67.426,17.805)
O2': (-71.842,-63.710,17.083)
C6: (-73.511,-68.492,19.392)
C5: (-72.450,-67.997,18.658)
C4: (-72.743,-67.148,17.640)
P: (-65.853,-64.633,15.181)
C4': (-69.659,-65.216,14.688)
C2': (-70.865,-64.511,16.502)
C2: (-74.826,-67.257,17.991)
N1: (-74.716,-68.086,19.018)
N3: (-73.912,-66.722,17.229)
N6: (-73.413,-69.329,20.415)
N7: (-71.095,-68.176,18.754)
N9: (-71.567,-66.803,17.090)
O5': (-67.320,-64.640,14.638)
O3': (-71.395,-63.627,14.383)
OP2: (-65.234,-65.929,14.935)
C3': (-70.318,-63.986,15.225)
C1': (-71.436,-65.831,16.026)
C5': (-68.286,-65.469,15.235)
O4': (-70.516,-66.307,15.098)
C8: (-70.606,-67.426,17.805)
O2': (-71.842,-63.710,17.083)
C6: (-73.511,-68.492,19.392)
C5: (-72.450,-67.997,18.658)
C4: (-72.743,-67.148,17.640)
P: (-65.853,-64.633,15.181)
C4': (-69.659,-65.216,14.688)
C2': (-70.865,-64.511,16.502)
C2: (-74.826,-67.257,17.991)
N1: (-74.716,-68.086,19.018)
N3: (-73.912,-66.722,17.229)
N6: (-73.413,-69.329,20.415)
N7: (-71.095,-68.176,18.754)
N9: (-71.567,-66.803,17.090)
O5': (-67.320,-64.640,14.638)
O3': (-71.395,-63.627,14.383)
Image (generated by PyMOL):