ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1Q81:A988:A1233

Extra

PDB:
ATOM 1 O3' U A 987 19.584 72.044 71.658 1.00 72.10 O
ATOM 2 P U A 988 18.062 72.471 71.416 1.00 74.93 P
ATOM 3 OP1 U A 988 17.451 72.865 72.720 1.00 74.75 O
ATOM 4 OP2 U A 988 17.451 71.394 70.612 1.00 76.02 O
ATOM 5 O5' U A 988 18.151 73.767 70.498 1.00 74.19 O
ATOM 6 C5' U A 988 18.381 75.052 71.085 1.00 75.36 C
ATOM 7 C4' U A 988 17.929 76.148 70.155 1.00 75.96 C
ATOM 8 O4' U A 988 16.611 75.828 69.617 1.00 77.52 O
ATOM 9 C3' U A 988 17.788 77.493 70.858 1.00 75.52 C
ATOM 10 O3' U A 988 18.068 78.573 69.967 1.00 71.63 O
ATOM 11 C2' U A 988 16.313 77.492 71.234 1.00 77.01 C
ATOM 12 O2' U A 988 15.819 78.788 71.464 1.00 77.15 O
ATOM 13 C1' U A 988 15.688 76.833 70.001 1.00 78.68 C
ATOM 14 N1 U A 988 14.369 76.210 70.230 1.00 81.22 N
ATOM 15 C2 U A 988 13.222 76.987 70.024 1.00 82.26 C
ATOM 16 O2 U A 988 13.252 78.149 69.651 1.00 82.26 O
ATOM 17 N3 U A 988 12.035 76.346 70.272 1.00 83.06 N
ATOM 18 C4 U A 988 11.866 75.042 70.693 1.00 84.40 C
ATOM 19 O4 U A 988 10.723 74.608 70.874 1.00 86.04 O
ATOM 20 C5 U A 988 13.086 74.307 70.877 1.00 83.23 C
ATOM 21 C6 U A 988 14.262 74.899 70.643 1.00 81.84 C
ATOM 22 P U A 989 19.427 79.426 70.132 1.00 67.83 P
ATOM 23 OP1 U A 989 19.091 80.851 69.872 1.00 67.25 O
ATOM 24 OP2 U A 989 20.478 78.758 69.320 1.00 66.57 O
ATOM 25 O5' U A 989 19.841 79.274 71.662 1.00 66.06 O
TER

ATOM 1 O3' C B1232 10.576 79.367 71.193 1.00 60.37 O
ATOM 2 P A B1233 10.072 79.597 69.689 1.00 60.34 P
ATOM 3 OP1 A B1233 10.016 78.252 69.054 1.00 59.37 O
ATOM 4 OP2 A B1233 10.886 80.674 69.061 1.00 60.92 O
ATOM 5 O5' A B1233 8.592 80.149 69.890 1.00 59.18 O
ATOM 6 C5' A B1233 7.597 79.332 70.522 1.00 59.03 C
ATOM 7 C4' A B1233 6.241 79.989 70.447 1.00 59.50 C
ATOM 8 O4' A B1233 6.172 81.124 71.343 1.00 59.74 O
ATOM 9 C3' A B1233 5.855 80.578 69.106 1.00 60.84 C
ATOM 10 O3' A B1233 5.437 79.597 68.186 1.00 61.17 O
ATOM 11 C2' A B1233 4.745 81.541 69.491 1.00 61.49 C
ATOM 12 O2' A B1233 3.526 80.885 69.787 1.00 61.79 O
ATOM 13 C1' A B1233 5.311 82.114 70.789 1.00 61.64 C
ATOM 14 N9 A B1233 6.092 83.330 70.570 1.00 61.87 N
ATOM 15 C8 A B1233 7.442 83.431 70.343 1.00 62.93 C
ATOM 16 N7 A B1233 7.864 84.665 70.209 1.00 62.92 N
ATOM 17 C5 A B1233 6.713 85.427 70.344 1.00 62.35 C
ATOM 18 C6 A B1233 6.488 86.814 70.290 1.00 62.57 C
ATOM 19 N6 A B1233 7.447 87.710 70.058 1.00 62.18 N
ATOM 20 N1 A B1233 5.226 87.253 70.471 1.00 62.27 N
ATOM 21 C2 A B1233 4.257 86.348 70.667 1.00 62.24 C
ATOM 22 N3 A B1233 4.342 85.017 70.724 1.00 61.54 N
ATOM 23 C4 A B1233 5.613 84.617 70.559 1.00 61.84 C
ATOM 24 P C B1234 5.825 79.763 66.648 1.00 61.32 P
ATOM 25 OP1 C B1234 5.349 78.544 65.958 1.00 61.90 O
ATOM 26 OP2 C B1234 7.269 80.121 66.589 1.00 61.78 O
ATOM 27 O5' C B1234 4.962 81.017 66.178 1.00 60.11 O
TER

Atoms:
C4: (11.866,75.042,70.693)
N3: (12.035,76.346,70.272)
OP1: (17.451,72.865,72.720)
OP2: (17.451,71.394,70.612)
C2: (13.222,76.987,70.024)
C1': (15.688,76.833,70.001)
C3': (17.788,77.493,70.858)
O5': (18.151,73.767,70.498)
O4': (16.611,75.828,69.617)
C5': (18.381,75.052,71.085)
P: (18.062,72.471,71.416)
C4': (17.929,76.148,70.155)
C2': (16.313,77.492,71.234)
O2': (15.819,78.788,71.464)
N1: (14.369,76.210,70.230)
O4: (10.723,74.608,70.874)
O2: (13.252,78.149,69.651)
C6: (14.262,74.899,70.643)
C5: (13.086,74.307,70.877)
O3': (18.068,78.573,69.967)
OP1: (10.016,78.252,69.054)
OP2: (10.886,80.674,69.061)
C3': (5.855,80.578,69.106)
C1': (5.311,82.114,70.789)
C5': (7.597,79.332,70.522)
O4': (6.172,81.124,71.343)
C8: (7.442,83.431,70.343)
O2': (3.526,80.885,69.787)
C6: (6.488,86.814,70.290)
C5: (6.713,85.427,70.344)
C4: (5.613,84.617,70.559)
P: (10.072,79.597,69.689)
C4': (6.241,79.989,70.447)
C2': (4.745,81.541,69.491)
C2: (4.257,86.348,70.667)
N1: (5.226,87.253,70.471)
N3: (4.342,85.017,70.724)
N6: (7.447,87.710,70.058)
N7: (7.864,84.665,70.209)
N9: (6.092,83.330,70.570)
O5': (8.592,80.149,69.890)
O3': (5.437,79.597,68.186)
Image (generated by PyMOL):
PyMOL image
show in jmol