Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3PDR:A89:A86
Extra
PDB:
ATOM 1 O3' A A 88 5.171 28.859 2.437 1.00 23.93 O
ATOM 2 P U A 89 5.886 30.213 2.916 1.00 29.90 P
ATOM 3 OP1 U A 89 6.444 30.890 1.712 1.00 31.85 O
ATOM 4 OP2 U A 89 6.789 29.929 4.052 1.00 26.66 O
ATOM 5 O5' U A 89 4.623 31.019 3.407 1.00 26.03 O
ATOM 6 C5' U A 89 3.550 31.271 2.515 1.00 26.44 C
ATOM 7 C4' U A 89 2.348 31.758 3.275 1.00 23.51 C
ATOM 8 O4' U A 89 1.910 30.750 4.222 1.00 24.29 O
ATOM 9 C3' U A 89 2.563 33.005 4.119 1.00 24.78 C
ATOM 10 O3' U A 89 2.448 34.171 3.321 1.00 23.26 O
ATOM 11 C2' U A 89 1.473 32.891 5.184 1.00 22.67 C
ATOM 12 O2' U A 89 0.245 33.386 4.671 1.00 25.65 O
ATOM 13 C1' U A 89 1.348 31.373 5.362 1.00 23.86 C
ATOM 14 N1 U A 89 1.974 30.791 6.577 1.00 22.87 N
ATOM 15 C2 U A 89 1.156 30.565 7.662 1.00 22.42 C
ATOM 16 O2 U A 89 -0.043 30.824 7.639 1.00 21.84 O
ATOM 17 N3 U A 89 1.781 30.024 8.763 1.00 19.51 N
ATOM 18 C4 U A 89 3.103 29.676 8.866 1.00 20.39 C
ATOM 19 O4 U A 89 3.525 29.190 9.910 1.00 20.04 O
ATOM 20 C5 U A 89 3.883 29.936 7.691 1.00 20.55 C
ATOM 21 C6 U A 89 3.306 30.472 6.615 1.00 21.30 C
ATOM 22 P A A 90 3.105 35.594 3.697 1.00 24.29 P
ATOM 23 OP1 A A 90 3.441 36.203 2.395 1.00 26.11 O
ATOM 24 OP2 A A 90 4.200 35.424 4.707 1.00 22.65 O
ATOM 25 O5' A A 90 1.904 36.393 4.325 1.00 22.51 O
TER
ATOM 1 O3' G B 85 0.734 31.518 13.134 1.00 16.48 O
ATOM 2 P A B 86 -0.178 30.609 12.133 1.00 18.54 P
ATOM 3 OP1 A B 86 -0.560 31.436 10.956 1.00 22.70 O
ATOM 4 OP2 A B 86 -1.260 30.078 13.006 1.00 18.16 O
ATOM 5 O5' A B 86 0.763 29.440 11.631 1.00 20.36 O
ATOM 6 C5' A B 86 1.330 28.527 12.560 1.00 19.74 C
ATOM 7 C4' A B 86 0.911 27.089 12.323 1.00 20.00 C
ATOM 8 O4' A B 86 -0.508 26.908 12.609 1.00 23.62 O
ATOM 9 C3' A B 86 1.129 26.488 10.931 1.00 20.75 C
ATOM 10 O3' A B 86 1.720 25.210 11.099 1.00 23.00 O
ATOM 11 C2' A B 86 -0.288 26.253 10.406 1.00 26.01 C
ATOM 12 O2' A B 86 -0.417 25.150 9.535 1.00 31.96 O
ATOM 13 C1' A B 86 -1.006 25.940 11.704 1.00 25.36 C
ATOM 14 N9 A B 86 -2.480 25.892 11.647 1.00 21.07 N
ATOM 15 C8 A B 86 -3.318 26.179 10.588 1.00 24.62 C
ATOM 16 N7 A B 86 -4.596 26.010 10.862 1.00 24.45 N
ATOM 17 C5 A B 86 -4.591 25.552 12.176 1.00 24.23 C
ATOM 18 C6 A B 86 -5.626 25.189 13.047 1.00 26.00 C
ATOM 19 N6 A B 86 -6.920 25.219 12.696 1.00 25.81 N
ATOM 20 N1 A B 86 -5.285 24.788 14.292 1.00 24.12 N
ATOM 21 C2 A B 86 -3.986 24.758 14.624 1.00 24.11 C
ATOM 22 N3 A B 86 -2.916 25.077 13.888 1.00 24.51 N
ATOM 23 C4 A B 86 -3.293 25.469 12.662 1.00 23.58 C
ATOM 24 P C B 87 3.317 25.079 11.180 1.00 24.07 P
ATOM 25 OP1 C B 87 3.629 24.340 12.423 1.00 24.20 O
ATOM 26 OP2 C B 87 3.806 26.446 10.991 1.00 21.18 O
ATOM 27 O5' C B 87 3.654 24.236 9.876 1.00 24.26 O
TER
ATOM 2 P U A 89 5.886 30.213 2.916 1.00 29.90 P
ATOM 3 OP1 U A 89 6.444 30.890 1.712 1.00 31.85 O
ATOM 4 OP2 U A 89 6.789 29.929 4.052 1.00 26.66 O
ATOM 5 O5' U A 89 4.623 31.019 3.407 1.00 26.03 O
ATOM 6 C5' U A 89 3.550 31.271 2.515 1.00 26.44 C
ATOM 7 C4' U A 89 2.348 31.758 3.275 1.00 23.51 C
ATOM 8 O4' U A 89 1.910 30.750 4.222 1.00 24.29 O
ATOM 9 C3' U A 89 2.563 33.005 4.119 1.00 24.78 C
ATOM 10 O3' U A 89 2.448 34.171 3.321 1.00 23.26 O
ATOM 11 C2' U A 89 1.473 32.891 5.184 1.00 22.67 C
ATOM 12 O2' U A 89 0.245 33.386 4.671 1.00 25.65 O
ATOM 13 C1' U A 89 1.348 31.373 5.362 1.00 23.86 C
ATOM 14 N1 U A 89 1.974 30.791 6.577 1.00 22.87 N
ATOM 15 C2 U A 89 1.156 30.565 7.662 1.00 22.42 C
ATOM 16 O2 U A 89 -0.043 30.824 7.639 1.00 21.84 O
ATOM 17 N3 U A 89 1.781 30.024 8.763 1.00 19.51 N
ATOM 18 C4 U A 89 3.103 29.676 8.866 1.00 20.39 C
ATOM 19 O4 U A 89 3.525 29.190 9.910 1.00 20.04 O
ATOM 20 C5 U A 89 3.883 29.936 7.691 1.00 20.55 C
ATOM 21 C6 U A 89 3.306 30.472 6.615 1.00 21.30 C
ATOM 22 P A A 90 3.105 35.594 3.697 1.00 24.29 P
ATOM 23 OP1 A A 90 3.441 36.203 2.395 1.00 26.11 O
ATOM 24 OP2 A A 90 4.200 35.424 4.707 1.00 22.65 O
ATOM 25 O5' A A 90 1.904 36.393 4.325 1.00 22.51 O
TER
ATOM 1 O3' G B 85 0.734 31.518 13.134 1.00 16.48 O
ATOM 2 P A B 86 -0.178 30.609 12.133 1.00 18.54 P
ATOM 3 OP1 A B 86 -0.560 31.436 10.956 1.00 22.70 O
ATOM 4 OP2 A B 86 -1.260 30.078 13.006 1.00 18.16 O
ATOM 5 O5' A B 86 0.763 29.440 11.631 1.00 20.36 O
ATOM 6 C5' A B 86 1.330 28.527 12.560 1.00 19.74 C
ATOM 7 C4' A B 86 0.911 27.089 12.323 1.00 20.00 C
ATOM 8 O4' A B 86 -0.508 26.908 12.609 1.00 23.62 O
ATOM 9 C3' A B 86 1.129 26.488 10.931 1.00 20.75 C
ATOM 10 O3' A B 86 1.720 25.210 11.099 1.00 23.00 O
ATOM 11 C2' A B 86 -0.288 26.253 10.406 1.00 26.01 C
ATOM 12 O2' A B 86 -0.417 25.150 9.535 1.00 31.96 O
ATOM 13 C1' A B 86 -1.006 25.940 11.704 1.00 25.36 C
ATOM 14 N9 A B 86 -2.480 25.892 11.647 1.00 21.07 N
ATOM 15 C8 A B 86 -3.318 26.179 10.588 1.00 24.62 C
ATOM 16 N7 A B 86 -4.596 26.010 10.862 1.00 24.45 N
ATOM 17 C5 A B 86 -4.591 25.552 12.176 1.00 24.23 C
ATOM 18 C6 A B 86 -5.626 25.189 13.047 1.00 26.00 C
ATOM 19 N6 A B 86 -6.920 25.219 12.696 1.00 25.81 N
ATOM 20 N1 A B 86 -5.285 24.788 14.292 1.00 24.12 N
ATOM 21 C2 A B 86 -3.986 24.758 14.624 1.00 24.11 C
ATOM 22 N3 A B 86 -2.916 25.077 13.888 1.00 24.51 N
ATOM 23 C4 A B 86 -3.293 25.469 12.662 1.00 23.58 C
ATOM 24 P C B 87 3.317 25.079 11.180 1.00 24.07 P
ATOM 25 OP1 C B 87 3.629 24.340 12.423 1.00 24.20 O
ATOM 26 OP2 C B 87 3.806 26.446 10.991 1.00 21.18 O
ATOM 27 O5' C B 87 3.654 24.236 9.876 1.00 24.26 O
TER
Atoms:
C4: (3.103,29.676,8.866)
N3: (1.781,30.024,8.763)
OP1: (6.444,30.890,1.712)
OP2: (6.789,29.929,4.052)
C2: (1.156,30.565,7.662)
C1': (1.348,31.373,5.362)
C3': (2.563,33.005,4.119)
O5': (4.623,31.019,3.407)
O4': (1.910,30.750,4.222)
C5': (3.550,31.271,2.515)
P: (5.886,30.213,2.916)
C4': (2.348,31.758,3.275)
C2': (1.473,32.891,5.184)
O2': (0.245,33.386,4.671)
N1: (1.974,30.791,6.577)
O4: (3.525,29.190,9.910)
O2: (-0.043,30.824,7.639)
C6: (3.306,30.472,6.615)
C5: (3.883,29.936,7.691)
O3': (2.448,34.171,3.321)
N3: (1.781,30.024,8.763)
OP1: (6.444,30.890,1.712)
OP2: (6.789,29.929,4.052)
C2: (1.156,30.565,7.662)
C1': (1.348,31.373,5.362)
C3': (2.563,33.005,4.119)
O5': (4.623,31.019,3.407)
O4': (1.910,30.750,4.222)
C5': (3.550,31.271,2.515)
P: (5.886,30.213,2.916)
C4': (2.348,31.758,3.275)
C2': (1.473,32.891,5.184)
O2': (0.245,33.386,4.671)
N1: (1.974,30.791,6.577)
O4: (3.525,29.190,9.910)
O2: (-0.043,30.824,7.639)
C6: (3.306,30.472,6.615)
C5: (3.883,29.936,7.691)
O3': (2.448,34.171,3.321)
OP1: (-0.560,31.436,10.956)
OP2: (-1.260,30.078,13.006)
C3': (1.129,26.488,10.931)
C1': (-1.006,25.940,11.704)
C5': (1.330,28.527,12.560)
O4': (-0.508,26.908,12.609)
C8: (-3.318,26.179,10.588)
O2': (-0.417,25.150,9.535)
C6: (-5.626,25.189,13.047)
C5: (-4.591,25.552,12.176)
C4: (-3.293,25.469,12.662)
P: (-0.178,30.609,12.133)
C4': (0.911,27.089,12.323)
C2': (-0.288,26.253,10.406)
C2: (-3.986,24.758,14.624)
N1: (-5.285,24.788,14.292)
N3: (-2.916,25.077,13.888)
N6: (-6.920,25.219,12.696)
N7: (-4.596,26.010,10.862)
N9: (-2.480,25.892,11.647)
O5': (0.763,29.440,11.631)
O3': (1.720,25.210,11.099)
OP2: (-1.260,30.078,13.006)
C3': (1.129,26.488,10.931)
C1': (-1.006,25.940,11.704)
C5': (1.330,28.527,12.560)
O4': (-0.508,26.908,12.609)
C8: (-3.318,26.179,10.588)
O2': (-0.417,25.150,9.535)
C6: (-5.626,25.189,13.047)
C5: (-4.591,25.552,12.176)
C4: (-3.293,25.469,12.662)
P: (-0.178,30.609,12.133)
C4': (0.911,27.089,12.323)
C2': (-0.288,26.253,10.406)
C2: (-3.986,24.758,14.624)
N1: (-5.285,24.788,14.292)
N3: (-2.916,25.077,13.888)
N6: (-6.920,25.219,12.696)
N7: (-4.596,26.010,10.862)
N9: (-2.480,25.892,11.647)
O5': (0.763,29.440,11.631)
O3': (1.720,25.210,11.099)
Image (generated by PyMOL):