Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:2885:2888
Extra
PDB:
ATOM 1 O3' G A 884 -40.817 -30.647 101.541 1.00119.36 O
ATOM 2 P U A 885 -42.357 -30.984 101.875 1.00114.39 P
ATOM 3 OP1 U A 885 -43.014 -29.718 102.289 1.00113.34 O
ATOM 4 OP2 U A 885 -42.363 -32.123 102.822 1.00116.06 O
ATOM 5 O5' U A 885 -42.918 -31.441 100.460 1.00114.25 O
ATOM 6 C5' U A 885 -42.939 -30.537 99.368 1.00112.81 C
ATOM 7 C4' U A 885 -42.861 -31.252 98.041 1.00112.98 C
ATOM 8 O4' U A 885 -41.709 -32.141 97.999 1.00113.80 O
ATOM 9 C3' U A 885 -44.024 -32.158 97.699 1.00113.91 C
ATOM 10 O3' U A 885 -45.166 -31.444 97.275 1.00113.13 O
ATOM 11 C2' U A 885 -43.426 -33.057 96.620 1.00114.37 C
ATOM 12 O2' U A 885 -43.391 -32.379 95.369 1.00113.17 O
ATOM 13 C1' U A 885 -41.983 -33.223 97.124 1.00114.62 C
ATOM 14 N1 U A 885 -41.778 -34.505 97.859 1.00116.30 N
ATOM 15 C2 U A 885 -41.603 -35.686 97.143 1.00117.30 C
ATOM 16 O2 U A 885 -41.612 -35.735 95.923 1.00116.88 O
ATOM 17 N3 U A 885 -41.415 -36.824 97.905 1.00118.89 N
ATOM 18 C4 U A 885 -41.380 -36.916 99.287 1.00119.59 C
ATOM 19 O4 U A 885 -41.203 -38.008 99.849 1.00121.09 O
ATOM 20 C5 U A 885 -41.568 -35.659 99.945 1.00118.48 C
ATOM 21 C6 U A 885 -41.751 -34.538 99.233 1.00116.93 C
ATOM 22 P G A 886 -46.627 -32.049 97.523 1.00127.94 P
ATOM 23 OP1 G A 886 -47.557 -30.897 97.626 1.00126.93 O
ATOM 24 OP2 G A 886 -46.523 -32.984 98.669 1.00129.39 O
ATOM 25 O5' G A 886 -46.902 -32.867 96.175 1.00128.32 O
TER
ATOM 1 O3' A B 887 -42.217 -40.441 94.575 1.00129.79 O
ATOM 2 P A B 888 -40.852 -40.632 95.412 1.00120.55 P
ATOM 3 OP1 A B 888 -40.696 -42.084 95.667 1.00122.39 O
ATOM 4 OP2 A B 888 -40.916 -39.702 96.571 1.00119.90 O
ATOM 5 O5' A B 888 -39.738 -40.152 94.391 1.00119.56 O
ATOM 6 C5' A B 888 -38.468 -39.725 94.843 1.00119.19 C
ATOM 7 C4' A B 888 -37.726 -39.021 93.744 1.00117.96 C
ATOM 8 O4' A B 888 -38.463 -37.844 93.334 1.00116.46 O
ATOM 9 C3' A B 888 -36.345 -38.500 94.090 1.00117.48 C
ATOM 10 O3' A B 888 -35.356 -39.513 94.014 1.00118.66 O
ATOM 11 C2' A B 888 -36.151 -37.390 93.064 1.00115.84 C
ATOM 12 O2' A B 888 -35.763 -37.935 91.813 1.00116.07 O
ATOM 13 C1' A B 888 -37.572 -36.840 92.922 1.00115.16 C
ATOM 14 N9 A B 888 -37.806 -35.638 93.748 1.00114.09 N
ATOM 15 C8 A B 888 -38.570 -35.549 94.884 1.00114.40 C
ATOM 16 N7 A B 888 -38.628 -34.351 95.419 1.00113.28 N
ATOM 17 C5 A B 888 -37.854 -33.592 94.563 1.00112.12 C
ATOM 18 C6 A B 888 -37.516 -32.231 94.571 1.00110.65 C
ATOM 19 N6 A B 888 -37.946 -31.386 95.515 1.00110.11 N
ATOM 20 N1 A B 888 -36.719 -31.767 93.579 1.00109.81 N
ATOM 21 C2 A B 888 -36.294 -32.620 92.641 1.00110.41 C
ATOM 22 N3 A B 888 -36.549 -33.922 92.531 1.00111.78 N
ATOM 23 C4 A B 888 -37.344 -34.359 93.528 1.00112.59 C
ATOM 24 P A B 889 -34.225 -39.640 95.144 1.00119.74 P
ATOM 25 OP1 A B 889 -33.731 -41.038 95.127 1.00121.44 O
ATOM 26 OP2 A B 889 -34.795 -39.104 96.399 1.00119.56 O
ATOM 27 O5' A B 889 -33.099 -38.670 94.600 1.00118.45 O
TER
ATOM 2 P U A 885 -42.357 -30.984 101.875 1.00114.39 P
ATOM 3 OP1 U A 885 -43.014 -29.718 102.289 1.00113.34 O
ATOM 4 OP2 U A 885 -42.363 -32.123 102.822 1.00116.06 O
ATOM 5 O5' U A 885 -42.918 -31.441 100.460 1.00114.25 O
ATOM 6 C5' U A 885 -42.939 -30.537 99.368 1.00112.81 C
ATOM 7 C4' U A 885 -42.861 -31.252 98.041 1.00112.98 C
ATOM 8 O4' U A 885 -41.709 -32.141 97.999 1.00113.80 O
ATOM 9 C3' U A 885 -44.024 -32.158 97.699 1.00113.91 C
ATOM 10 O3' U A 885 -45.166 -31.444 97.275 1.00113.13 O
ATOM 11 C2' U A 885 -43.426 -33.057 96.620 1.00114.37 C
ATOM 12 O2' U A 885 -43.391 -32.379 95.369 1.00113.17 O
ATOM 13 C1' U A 885 -41.983 -33.223 97.124 1.00114.62 C
ATOM 14 N1 U A 885 -41.778 -34.505 97.859 1.00116.30 N
ATOM 15 C2 U A 885 -41.603 -35.686 97.143 1.00117.30 C
ATOM 16 O2 U A 885 -41.612 -35.735 95.923 1.00116.88 O
ATOM 17 N3 U A 885 -41.415 -36.824 97.905 1.00118.89 N
ATOM 18 C4 U A 885 -41.380 -36.916 99.287 1.00119.59 C
ATOM 19 O4 U A 885 -41.203 -38.008 99.849 1.00121.09 O
ATOM 20 C5 U A 885 -41.568 -35.659 99.945 1.00118.48 C
ATOM 21 C6 U A 885 -41.751 -34.538 99.233 1.00116.93 C
ATOM 22 P G A 886 -46.627 -32.049 97.523 1.00127.94 P
ATOM 23 OP1 G A 886 -47.557 -30.897 97.626 1.00126.93 O
ATOM 24 OP2 G A 886 -46.523 -32.984 98.669 1.00129.39 O
ATOM 25 O5' G A 886 -46.902 -32.867 96.175 1.00128.32 O
TER
ATOM 1 O3' A B 887 -42.217 -40.441 94.575 1.00129.79 O
ATOM 2 P A B 888 -40.852 -40.632 95.412 1.00120.55 P
ATOM 3 OP1 A B 888 -40.696 -42.084 95.667 1.00122.39 O
ATOM 4 OP2 A B 888 -40.916 -39.702 96.571 1.00119.90 O
ATOM 5 O5' A B 888 -39.738 -40.152 94.391 1.00119.56 O
ATOM 6 C5' A B 888 -38.468 -39.725 94.843 1.00119.19 C
ATOM 7 C4' A B 888 -37.726 -39.021 93.744 1.00117.96 C
ATOM 8 O4' A B 888 -38.463 -37.844 93.334 1.00116.46 O
ATOM 9 C3' A B 888 -36.345 -38.500 94.090 1.00117.48 C
ATOM 10 O3' A B 888 -35.356 -39.513 94.014 1.00118.66 O
ATOM 11 C2' A B 888 -36.151 -37.390 93.064 1.00115.84 C
ATOM 12 O2' A B 888 -35.763 -37.935 91.813 1.00116.07 O
ATOM 13 C1' A B 888 -37.572 -36.840 92.922 1.00115.16 C
ATOM 14 N9 A B 888 -37.806 -35.638 93.748 1.00114.09 N
ATOM 15 C8 A B 888 -38.570 -35.549 94.884 1.00114.40 C
ATOM 16 N7 A B 888 -38.628 -34.351 95.419 1.00113.28 N
ATOM 17 C5 A B 888 -37.854 -33.592 94.563 1.00112.12 C
ATOM 18 C6 A B 888 -37.516 -32.231 94.571 1.00110.65 C
ATOM 19 N6 A B 888 -37.946 -31.386 95.515 1.00110.11 N
ATOM 20 N1 A B 888 -36.719 -31.767 93.579 1.00109.81 N
ATOM 21 C2 A B 888 -36.294 -32.620 92.641 1.00110.41 C
ATOM 22 N3 A B 888 -36.549 -33.922 92.531 1.00111.78 N
ATOM 23 C4 A B 888 -37.344 -34.359 93.528 1.00112.59 C
ATOM 24 P A B 889 -34.225 -39.640 95.144 1.00119.74 P
ATOM 25 OP1 A B 889 -33.731 -41.038 95.127 1.00121.44 O
ATOM 26 OP2 A B 889 -34.795 -39.104 96.399 1.00119.56 O
ATOM 27 O5' A B 889 -33.099 -38.670 94.600 1.00118.45 O
TER
Atoms:
C4: (-41.380,-36.916,99.287)
N3: (-41.415,-36.824,97.905)
OP1: (-43.014,-29.718,102.289)
OP2: (-42.363,-32.123,102.822)
C2: (-41.603,-35.686,97.143)
C1': (-41.983,-33.223,97.124)
C3': (-44.024,-32.158,97.699)
O5': (-42.918,-31.441,100.460)
O4': (-41.709,-32.141,97.999)
C5': (-42.939,-30.537,99.368)
P: (-42.357,-30.984,101.875)
C4': (-42.861,-31.252,98.041)
C2': (-43.426,-33.057,96.620)
O2': (-43.391,-32.379,95.369)
N1: (-41.778,-34.505,97.859)
O4: (-41.203,-38.008,99.849)
O2: (-41.612,-35.735,95.923)
C6: (-41.751,-34.538,99.233)
C5: (-41.568,-35.659,99.945)
O3': (-45.166,-31.444,97.275)
N3: (-41.415,-36.824,97.905)
OP1: (-43.014,-29.718,102.289)
OP2: (-42.363,-32.123,102.822)
C2: (-41.603,-35.686,97.143)
C1': (-41.983,-33.223,97.124)
C3': (-44.024,-32.158,97.699)
O5': (-42.918,-31.441,100.460)
O4': (-41.709,-32.141,97.999)
C5': (-42.939,-30.537,99.368)
P: (-42.357,-30.984,101.875)
C4': (-42.861,-31.252,98.041)
C2': (-43.426,-33.057,96.620)
O2': (-43.391,-32.379,95.369)
N1: (-41.778,-34.505,97.859)
O4: (-41.203,-38.008,99.849)
O2: (-41.612,-35.735,95.923)
C6: (-41.751,-34.538,99.233)
C5: (-41.568,-35.659,99.945)
O3': (-45.166,-31.444,97.275)
OP1: (-40.696,-42.084,95.667)
OP2: (-40.916,-39.702,96.571)
C3': (-36.345,-38.500,94.090)
C1': (-37.572,-36.840,92.922)
C5': (-38.468,-39.725,94.843)
O4': (-38.463,-37.844,93.334)
C8: (-38.570,-35.549,94.884)
O2': (-35.763,-37.935,91.813)
C6: (-37.516,-32.231,94.571)
C5: (-37.854,-33.592,94.563)
C4: (-37.344,-34.359,93.528)
P: (-40.852,-40.632,95.412)
C4': (-37.726,-39.021,93.744)
C2': (-36.151,-37.390,93.064)
C2: (-36.294,-32.620,92.641)
N1: (-36.719,-31.767,93.579)
N3: (-36.549,-33.922,92.531)
N6: (-37.946,-31.386,95.515)
N7: (-38.628,-34.351,95.419)
N9: (-37.806,-35.638,93.748)
O5': (-39.738,-40.152,94.391)
O3': (-35.356,-39.513,94.014)
OP2: (-40.916,-39.702,96.571)
C3': (-36.345,-38.500,94.090)
C1': (-37.572,-36.840,92.922)
C5': (-38.468,-39.725,94.843)
O4': (-38.463,-37.844,93.334)
C8: (-38.570,-35.549,94.884)
O2': (-35.763,-37.935,91.813)
C6: (-37.516,-32.231,94.571)
C5: (-37.854,-33.592,94.563)
C4: (-37.344,-34.359,93.528)
P: (-40.852,-40.632,95.412)
C4': (-37.726,-39.021,93.744)
C2': (-36.151,-37.390,93.064)
C2: (-36.294,-32.620,92.641)
N1: (-36.719,-31.767,93.579)
N3: (-36.549,-33.922,92.531)
N6: (-37.946,-31.386,95.515)
N7: (-38.628,-34.351,95.419)
N9: (-37.806,-35.638,93.748)
O5': (-39.738,-40.152,94.391)
O3': (-35.356,-39.513,94.014)
Image (generated by PyMOL):