Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2859:A2843
Extra
PDB:
ATOM 1 O3' U A2858 -6.338 -51.075 -51.617 1.00 0.01 O
ATOM 2 P U A2859 -7.448 -52.191 -51.395 1.00 7.41 P
ATOM 3 OP1 U A2859 -7.312 -52.667 -50.008 1.00 7.41 O
ATOM 4 OP2 U A2859 -7.302 -53.158 -52.503 1.00 7.41 O
ATOM 5 O5' U A2859 -8.807 -51.382 -51.552 1.00 7.41 O
ATOM 6 C5' U A2859 -10.056 -52.054 -51.625 1.00 7.41 C
ATOM 7 C4' U A2859 -11.131 -51.242 -50.975 1.00 7.41 C
ATOM 8 O4' U A2859 -10.950 -51.311 -49.526 1.00 7.41 O
ATOM 9 C3' U A2859 -11.119 -49.742 -51.342 1.00 7.41 C
ATOM 10 O3' U A2859 -12.460 -49.223 -51.429 1.00 7.41 O
ATOM 11 C2' U A2859 -10.441 -49.119 -50.144 1.00 7.41 C
ATOM 12 O2' U A2859 -10.790 -47.782 -49.948 1.00 7.41 O
ATOM 13 C1' U A2859 -10.968 -50.001 -49.013 1.00 7.41 C
ATOM 14 N1 U A2859 -10.184 -49.932 -47.733 1.00 7.71 N
ATOM 15 C2 U A2859 -10.719 -49.105 -46.740 1.00 7.71 C
ATOM 16 O2 U A2859 -11.747 -48.461 -46.782 1.00 7.71 O
ATOM 17 N3 U A2859 -10.038 -48.994 -45.598 1.00 7.71 N
ATOM 18 C4 U A2859 -8.880 -49.594 -45.271 1.00 7.71 C
ATOM 19 O4 U A2859 -8.440 -49.321 -44.150 1.00 7.71 O
ATOM 20 C5 U A2859 -8.348 -50.443 -46.297 1.00 7.71 C
ATOM 21 C6 U A2859 -9.002 -50.575 -47.468 1.00 7.71 C
ATOM 22 P G A2860 -13.130 -48.839 -52.855 1.00 0.02 P
ATOM 23 OP1 G A2860 -12.032 -48.660 -53.800 1.00 0.02 O
ATOM 24 OP2 G A2860 -14.058 -47.705 -52.631 1.00 0.02 O
ATOM 25 O5' G A2860 -13.944 -50.157 -53.229 1.00 0.02 O
TER
ATOM 1 O3' U B2842 -13.155 -47.907 -43.826 1.00 0.01 O
ATOM 2 P A B2843 -12.085 -47.456 -42.743 1.00 0.01 P
ATOM 3 OP1 A B2843 -12.531 -46.163 -42.226 1.00 0.01 O
ATOM 4 OP2 A B2843 -10.740 -47.566 -43.365 1.00 0.01 O
ATOM 5 O5' A B2843 -12.241 -48.557 -41.630 1.00 0.01 O
ATOM 6 C5' A B2843 -12.978 -48.308 -40.461 1.00 0.01 C
ATOM 7 C4' A B2843 -12.646 -49.324 -39.429 1.00 0.01 C
ATOM 8 O4' A B2843 -12.771 -50.641 -40.013 1.00 0.01 O
ATOM 9 C3' A B2843 -11.225 -49.285 -38.944 1.00 0.01 C
ATOM 10 O3' A B2843 -11.011 -48.311 -37.958 1.00 0.01 O
ATOM 11 C2' A B2843 -11.015 -50.686 -38.451 1.00 0.01 C
ATOM 12 O2' A B2843 -11.650 -50.851 -37.203 1.00 0.01 O
ATOM 13 C1' A B2843 -11.781 -51.485 -39.495 1.00 0.01 C
ATOM 14 N9 A B2843 -10.918 -51.919 -40.599 1.00 0.01 N
ATOM 15 C8 A B2843 -10.927 -51.427 -41.865 1.00 0.01 C
ATOM 16 N7 A B2843 -10.046 -51.997 -42.652 1.00 0.01 N
ATOM 17 C5 A B2843 -9.419 -52.929 -41.846 1.00 0.01 C
ATOM 18 C6 A B2843 -8.392 -53.851 -42.088 1.00 0.01 C
ATOM 19 N6 A B2843 -7.784 -53.990 -43.248 1.00 0.01 N
ATOM 20 N1 A B2843 -7.988 -54.660 -41.098 1.00 0.01 N
ATOM 21 C2 A B2843 -8.602 -54.517 -39.917 1.00 0.01 C
ATOM 22 N3 A B2843 -9.580 -53.676 -39.571 1.00 0.01 N
ATOM 23 C4 A B2843 -9.955 -52.892 -40.588 1.00 0.01 C
ATOM 24 P A B2844 -9.599 -47.583 -37.876 1.00 0.01 P
ATOM 25 OP1 A B2844 -9.649 -46.630 -36.762 1.00 0.01 O
ATOM 26 OP2 A B2844 -9.308 -47.091 -39.227 1.00 0.01 O
ATOM 27 O5' A B2844 -8.616 -48.759 -37.520 1.00 0.01 O
TER
ATOM 2 P U A2859 -7.448 -52.191 -51.395 1.00 7.41 P
ATOM 3 OP1 U A2859 -7.312 -52.667 -50.008 1.00 7.41 O
ATOM 4 OP2 U A2859 -7.302 -53.158 -52.503 1.00 7.41 O
ATOM 5 O5' U A2859 -8.807 -51.382 -51.552 1.00 7.41 O
ATOM 6 C5' U A2859 -10.056 -52.054 -51.625 1.00 7.41 C
ATOM 7 C4' U A2859 -11.131 -51.242 -50.975 1.00 7.41 C
ATOM 8 O4' U A2859 -10.950 -51.311 -49.526 1.00 7.41 O
ATOM 9 C3' U A2859 -11.119 -49.742 -51.342 1.00 7.41 C
ATOM 10 O3' U A2859 -12.460 -49.223 -51.429 1.00 7.41 O
ATOM 11 C2' U A2859 -10.441 -49.119 -50.144 1.00 7.41 C
ATOM 12 O2' U A2859 -10.790 -47.782 -49.948 1.00 7.41 O
ATOM 13 C1' U A2859 -10.968 -50.001 -49.013 1.00 7.41 C
ATOM 14 N1 U A2859 -10.184 -49.932 -47.733 1.00 7.71 N
ATOM 15 C2 U A2859 -10.719 -49.105 -46.740 1.00 7.71 C
ATOM 16 O2 U A2859 -11.747 -48.461 -46.782 1.00 7.71 O
ATOM 17 N3 U A2859 -10.038 -48.994 -45.598 1.00 7.71 N
ATOM 18 C4 U A2859 -8.880 -49.594 -45.271 1.00 7.71 C
ATOM 19 O4 U A2859 -8.440 -49.321 -44.150 1.00 7.71 O
ATOM 20 C5 U A2859 -8.348 -50.443 -46.297 1.00 7.71 C
ATOM 21 C6 U A2859 -9.002 -50.575 -47.468 1.00 7.71 C
ATOM 22 P G A2860 -13.130 -48.839 -52.855 1.00 0.02 P
ATOM 23 OP1 G A2860 -12.032 -48.660 -53.800 1.00 0.02 O
ATOM 24 OP2 G A2860 -14.058 -47.705 -52.631 1.00 0.02 O
ATOM 25 O5' G A2860 -13.944 -50.157 -53.229 1.00 0.02 O
TER
ATOM 1 O3' U B2842 -13.155 -47.907 -43.826 1.00 0.01 O
ATOM 2 P A B2843 -12.085 -47.456 -42.743 1.00 0.01 P
ATOM 3 OP1 A B2843 -12.531 -46.163 -42.226 1.00 0.01 O
ATOM 4 OP2 A B2843 -10.740 -47.566 -43.365 1.00 0.01 O
ATOM 5 O5' A B2843 -12.241 -48.557 -41.630 1.00 0.01 O
ATOM 6 C5' A B2843 -12.978 -48.308 -40.461 1.00 0.01 C
ATOM 7 C4' A B2843 -12.646 -49.324 -39.429 1.00 0.01 C
ATOM 8 O4' A B2843 -12.771 -50.641 -40.013 1.00 0.01 O
ATOM 9 C3' A B2843 -11.225 -49.285 -38.944 1.00 0.01 C
ATOM 10 O3' A B2843 -11.011 -48.311 -37.958 1.00 0.01 O
ATOM 11 C2' A B2843 -11.015 -50.686 -38.451 1.00 0.01 C
ATOM 12 O2' A B2843 -11.650 -50.851 -37.203 1.00 0.01 O
ATOM 13 C1' A B2843 -11.781 -51.485 -39.495 1.00 0.01 C
ATOM 14 N9 A B2843 -10.918 -51.919 -40.599 1.00 0.01 N
ATOM 15 C8 A B2843 -10.927 -51.427 -41.865 1.00 0.01 C
ATOM 16 N7 A B2843 -10.046 -51.997 -42.652 1.00 0.01 N
ATOM 17 C5 A B2843 -9.419 -52.929 -41.846 1.00 0.01 C
ATOM 18 C6 A B2843 -8.392 -53.851 -42.088 1.00 0.01 C
ATOM 19 N6 A B2843 -7.784 -53.990 -43.248 1.00 0.01 N
ATOM 20 N1 A B2843 -7.988 -54.660 -41.098 1.00 0.01 N
ATOM 21 C2 A B2843 -8.602 -54.517 -39.917 1.00 0.01 C
ATOM 22 N3 A B2843 -9.580 -53.676 -39.571 1.00 0.01 N
ATOM 23 C4 A B2843 -9.955 -52.892 -40.588 1.00 0.01 C
ATOM 24 P A B2844 -9.599 -47.583 -37.876 1.00 0.01 P
ATOM 25 OP1 A B2844 -9.649 -46.630 -36.762 1.00 0.01 O
ATOM 26 OP2 A B2844 -9.308 -47.091 -39.227 1.00 0.01 O
ATOM 27 O5' A B2844 -8.616 -48.759 -37.520 1.00 0.01 O
TER
Atoms:
C4: (-8.880,-49.594,-45.271)
N3: (-10.038,-48.994,-45.598)
OP1: (-7.312,-52.667,-50.008)
OP2: (-7.302,-53.158,-52.503)
C2: (-10.719,-49.105,-46.740)
C1': (-10.968,-50.001,-49.013)
C3': (-11.119,-49.742,-51.342)
O5': (-8.807,-51.382,-51.552)
O4': (-10.950,-51.311,-49.526)
C5': (-10.056,-52.054,-51.625)
P: (-7.448,-52.191,-51.395)
C4': (-11.131,-51.242,-50.975)
C2': (-10.441,-49.119,-50.144)
O2': (-10.790,-47.782,-49.948)
N1: (-10.184,-49.932,-47.733)
O4: (-8.440,-49.321,-44.150)
O2: (-11.747,-48.461,-46.782)
C6: (-9.002,-50.575,-47.468)
C5: (-8.348,-50.443,-46.297)
O3': (-12.460,-49.223,-51.429)
N3: (-10.038,-48.994,-45.598)
OP1: (-7.312,-52.667,-50.008)
OP2: (-7.302,-53.158,-52.503)
C2: (-10.719,-49.105,-46.740)
C1': (-10.968,-50.001,-49.013)
C3': (-11.119,-49.742,-51.342)
O5': (-8.807,-51.382,-51.552)
O4': (-10.950,-51.311,-49.526)
C5': (-10.056,-52.054,-51.625)
P: (-7.448,-52.191,-51.395)
C4': (-11.131,-51.242,-50.975)
C2': (-10.441,-49.119,-50.144)
O2': (-10.790,-47.782,-49.948)
N1: (-10.184,-49.932,-47.733)
O4: (-8.440,-49.321,-44.150)
O2: (-11.747,-48.461,-46.782)
C6: (-9.002,-50.575,-47.468)
C5: (-8.348,-50.443,-46.297)
O3': (-12.460,-49.223,-51.429)
OP1: (-12.531,-46.163,-42.226)
OP2: (-10.740,-47.566,-43.365)
C3': (-11.225,-49.285,-38.944)
C1': (-11.781,-51.485,-39.495)
C5': (-12.978,-48.308,-40.461)
O4': (-12.771,-50.641,-40.013)
C8: (-10.927,-51.427,-41.865)
O2': (-11.650,-50.851,-37.203)
C6: (-8.392,-53.851,-42.088)
C5: (-9.419,-52.929,-41.846)
C4: (-9.955,-52.892,-40.588)
P: (-12.085,-47.456,-42.743)
C4': (-12.646,-49.324,-39.429)
C2': (-11.015,-50.686,-38.451)
C2: (-8.602,-54.517,-39.917)
N1: (-7.988,-54.660,-41.098)
N3: (-9.580,-53.676,-39.571)
N6: (-7.784,-53.990,-43.248)
N7: (-10.046,-51.997,-42.652)
N9: (-10.918,-51.919,-40.599)
O5': (-12.241,-48.557,-41.630)
O3': (-11.011,-48.311,-37.958)
OP2: (-10.740,-47.566,-43.365)
C3': (-11.225,-49.285,-38.944)
C1': (-11.781,-51.485,-39.495)
C5': (-12.978,-48.308,-40.461)
O4': (-12.771,-50.641,-40.013)
C8: (-10.927,-51.427,-41.865)
O2': (-11.650,-50.851,-37.203)
C6: (-8.392,-53.851,-42.088)
C5: (-9.419,-52.929,-41.846)
C4: (-9.955,-52.892,-40.588)
P: (-12.085,-47.456,-42.743)
C4': (-12.646,-49.324,-39.429)
C2': (-11.015,-50.686,-38.451)
C2: (-8.602,-54.517,-39.917)
N1: (-7.988,-54.660,-41.098)
N3: (-9.580,-53.676,-39.571)
N6: (-7.784,-53.990,-43.248)
N7: (-10.046,-51.997,-42.652)
N9: (-10.918,-51.919,-40.599)
O5': (-12.241,-48.557,-41.630)
O3': (-11.011,-48.311,-37.958)
Image (generated by PyMOL):