ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3RER:K2:K7

Extra

PDB:
ATOM 1 O3' U A 1 15.067 1.635 2.662 1.00 14.71 O
ATOM 2 P U A 2 14.169 0.326 2.446 1.00 15.85 P
ATOM 3 OP1 U A 2 13.916 -0.203 3.808 1.00 17.22 O
ATOM 4 OP2 U A 2 14.765 -0.479 1.344 1.00 17.32 O
ATOM 5 O5' U A 2 12.804 0.982 1.931 1.00 17.62 O
ATOM 6 C5' U A 2 12.282 0.853 0.643 1.00 16.52 C
ATOM 7 C4' U A 2 10.823 0.465 0.772 1.00 14.76 C
ATOM 8 O4' U A 2 10.775 -0.941 1.083 1.00 15.63 O
ATOM 9 C3' U A 2 10.016 1.133 1.899 1.00 13.51 C
ATOM 10 O3' U A 2 8.693 1.332 1.462 1.00 14.33 O
ATOM 11 C2' U A 2 10.002 0.095 3.006 1.00 14.28 C
ATOM 12 O2' U A 2 8.920 0.251 3.914 1.00 15.25 O
ATOM 13 C1' U A 2 9.842 -1.136 2.133 1.00 13.90 C
ATOM 14 N1 U A 2 10.169 -2.407 2.821 1.00 15.49 N
ATOM 15 C2 U A 2 9.168 -3.362 2.946 1.00 15.75 C
ATOM 16 O2 U A 2 8.040 -3.227 2.505 1.00 16.28 O
ATOM 17 N3 U A 2 9.542 -4.500 3.609 1.00 15.48 N
ATOM 18 C4 U A 2 10.795 -4.764 4.149 1.00 18.52 C
ATOM 19 O4 U A 2 10.992 -5.840 4.703 1.00 18.27 O
ATOM 20 C5 U A 2 11.785 -3.724 3.982 1.00 17.25 C
ATOM 21 C6 U A 2 11.436 -2.601 3.347 1.00 17.29 C
ATOM 22 P U A 3 8.201 2.703 0.813 1.00 14.06 P
ATOM 23 OP1 U A 3 8.515 3.824 1.738 1.00 14.17 O
ATOM 24 OP2 U A 3 6.816 2.439 0.359 1.00 14.87 O
ATOM 25 O5' U A 3 9.122 2.883 -0.498 1.00 12.68 O
TER

ATOM 1 O3' U B 6 5.776 -6.917 6.026 1.00 16.88 O
ATOM 2 P A B 7 6.620 -5.734 5.349 1.00 15.40 P
ATOM 3 OP1 A B 7 5.602 -4.710 4.968 1.00 14.91 O
ATOM 4 OP2 A B 7 7.529 -6.274 4.314 1.00 15.09 O
ATOM 5 O5' A B 7 7.526 -5.202 6.559 1.00 16.70 O
ATOM 6 C5' A B 7 6.893 -4.556 7.663 1.00 15.39 C
ATOM 7 C4' A B 7 7.879 -3.674 8.411 1.00 13.62 C
ATOM 8 O4' A B 7 8.857 -4.548 9.034 1.00 15.71 O
ATOM 9 C3' A B 7 8.748 -2.718 7.591 1.00 15.40 C
ATOM 10 O3' A B 7 8.048 -1.514 7.244 1.00 14.59 O
ATOM 11 C2' A B 7 9.820 -2.417 8.637 1.00 15.53 C
ATOM 12 O2' A B 7 9.389 -1.452 9.579 1.00 17.15 O
ATOM 13 C1' A B 7 10.001 -3.771 9.346 1.00 15.68 C
ATOM 14 N9 A B 7 11.217 -4.475 8.925 1.00 16.03 N
ATOM 15 C8 A B 7 11.428 -5.120 7.741 1.00 16.49 C
ATOM 16 N7 A B 7 12.622 -5.653 7.624 1.00 19.79 N
ATOM 17 C5 A B 7 13.243 -5.337 8.823 1.00 18.83 C
ATOM 18 C6 A B 7 14.530 -5.620 9.336 1.00 21.83 C
ATOM 19 N6 A B 7 15.454 -6.307 8.643 1.00 23.88 N
ATOM 20 N1 A B 7 14.829 -5.169 10.581 1.00 22.75 N
ATOM 21 C2 A B 7 13.900 -4.480 11.259 1.00 20.54 C
ATOM 22 N3 A B 7 12.666 -4.148 10.871 1.00 17.57 N
ATOM 23 C4 A B 7 12.391 -4.616 9.636 1.00 17.47 C
TER

Atoms:
C4: (10.795,-4.764,4.149)
N3: (9.542,-4.500,3.609)
OP1: (13.916,-0.203,3.808)
OP2: (14.765,-0.479,1.344)
C2: (9.168,-3.362,2.946)
C1': (9.842,-1.136,2.133)
C3': (10.016,1.133,1.899)
O5': (12.804,0.982,1.931)
O4': (10.775,-0.941,1.083)
C5': (12.282,0.853,0.643)
P: (14.169,0.326,2.446)
C4': (10.823,0.465,0.772)
C2': (10.002,0.095,3.006)
O2': (8.920,0.251,3.914)
N1: (10.169,-2.407,2.821)
O4: (10.992,-5.840,4.703)
O2: (8.040,-3.227,2.505)
C6: (11.436,-2.601,3.347)
C5: (11.785,-3.724,3.982)
O3': (8.693,1.332,1.462)
OP1: (5.602,-4.710,4.968)
OP2: (7.529,-6.274,4.314)
C3': (8.748,-2.718,7.591)
C1': (10.001,-3.771,9.346)
C5': (6.893,-4.556,7.663)
O4': (8.857,-4.548,9.034)
C8: (11.428,-5.120,7.741)
O2': (9.389,-1.452,9.579)
C6: (14.530,-5.620,9.336)
C5: (13.243,-5.337,8.823)
C4: (12.391,-4.616,9.636)
P: (6.620,-5.734,5.349)
C4': (7.879,-3.674,8.411)
C2': (9.820,-2.417,8.637)
C2: (13.900,-4.480,11.259)
N1: (14.829,-5.169,10.581)
N3: (12.666,-4.148,10.871)
N6: (15.454,-6.307,8.643)
N7: (12.622,-5.653,7.624)
N9: (11.217,-4.475,8.925)
O5': (7.526,-5.202,6.559)
O3': (8.048,-1.514,7.244)
Image (generated by PyMOL):
PyMOL image
show in jmol