Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQL:0346:0281
Extra
PDB:
ATOM 1 O3' A A 345 55.986 124.032 12.295 1.00 90.98 O
ATOM 2 P G A 346 57.401 124.362 12.987 1.00 92.27 P
ATOM 3 OP1 G A 346 57.803 123.199 13.820 1.00 92.78 O
ATOM 4 OP2 G A 346 57.313 125.714 13.601 1.00 91.74 O
ATOM 5 O5' G A 346 58.410 124.430 11.756 1.00 93.64 O
ATOM 6 C5' G A 346 58.074 125.188 10.585 1.00 93.86 C
ATOM 7 C4' G A 346 57.552 124.271 9.503 1.00 93.87 C
ATOM 8 O4' G A 346 56.721 125.040 8.595 1.00 94.03 O
ATOM 9 C3' G A 346 58.593 123.573 8.632 1.00 93.67 C
ATOM 10 O3' G A 346 58.026 122.328 8.196 1.00 92.88 O
ATOM 11 C2' G A 346 58.733 124.564 7.477 1.00 93.65 C
ATOM 12 O2' G A 346 59.253 124.000 6.292 1.00 94.20 O
ATOM 13 C1' G A 346 57.277 124.999 7.298 1.00 93.37 C
ATOM 14 N9 G A 346 57.042 126.299 6.679 1.00 92.36 N
ATOM 15 C8 G A 346 57.879 127.389 6.639 1.00 91.95 C
ATOM 16 N7 G A 346 57.355 128.414 6.022 1.00 91.70 N
ATOM 17 C5 G A 346 56.099 127.971 5.629 1.00 92.04 C
ATOM 18 C6 G A 346 55.066 128.640 4.924 1.00 92.79 C
ATOM 19 O6 G A 346 55.051 129.802 4.495 1.00 93.48 O
ATOM 20 N1 G A 346 53.959 127.816 4.737 1.00 93.02 N
ATOM 21 C2 G A 346 53.856 126.517 5.175 1.00 92.35 C
ATOM 22 N2 G A 346 52.707 125.885 4.896 1.00 92.71 N
ATOM 23 N3 G A 346 54.808 125.885 5.836 1.00 91.35 N
ATOM 24 C4 G A 346 55.894 126.667 6.025 1.00 92.03 C
ATOM 25 P U A 347 58.951 121.208 7.494 1.00 92.08 P
ATOM 26 OP1 U A 347 60.273 121.144 8.178 1.00 91.54 O
ATOM 27 OP2 U A 347 58.892 121.433 6.025 1.00 91.74 O
ATOM 28 O5' U A 347 58.165 119.848 7.764 1.00 91.89 O
TER
ATOM 1 O3' G B 280 50.065 126.595 2.177 1.00 88.21 O
ATOM 2 P A B 281 49.904 127.418 3.553 1.00 88.92 P
ATOM 3 OP1 A B 281 48.599 128.138 3.482 1.00 88.16 O
ATOM 4 OP2 A B 281 51.155 128.190 3.797 1.00 87.17 O
ATOM 5 O5' A B 281 49.803 126.269 4.654 1.00 87.66 O
ATOM 6 C5' A B 281 48.571 126.010 5.357 1.00 88.15 C
ATOM 7 C4' A B 281 47.636 125.189 4.498 1.00 88.31 C
ATOM 8 O4' A B 281 48.375 124.119 3.851 1.00 89.01 O
ATOM 9 C3' A B 281 46.526 124.478 5.256 1.00 88.64 C
ATOM 10 O3' A B 281 45.412 125.319 5.536 1.00 88.96 O
ATOM 11 C2' A B 281 46.196 123.317 4.329 1.00 88.39 C
ATOM 12 O2' A B 281 45.390 123.691 3.232 1.00 88.52 O
ATOM 13 C1' A B 281 47.592 122.936 3.833 1.00 88.15 C
ATOM 14 N9 A B 281 48.241 121.958 4.707 1.00 88.53 N
ATOM 15 C8 A B 281 49.429 122.093 5.390 1.00 88.49 C
ATOM 16 N7 A B 281 49.749 121.045 6.106 1.00 88.07 N
ATOM 17 C5 A B 281 48.707 120.156 5.880 1.00 88.33 C
ATOM 18 C6 A B 281 48.453 118.857 6.352 1.00 88.33 C
ATOM 19 N6 A B 281 49.265 118.202 7.189 1.00 87.64 N
ATOM 20 N1 A B 281 47.323 118.246 5.929 1.00 88.09 N
ATOM 21 C2 A B 281 46.512 118.904 5.092 1.00 87.50 C
ATOM 22 N3 A B 281 46.640 120.125 4.582 1.00 87.98 N
ATOM 23 C4 A B 281 47.772 120.704 5.019 1.00 88.34 C
ATOM 24 P C B 282 44.471 124.996 6.801 1.00 89.11 P
ATOM 25 OP1 C B 282 43.534 126.135 6.987 1.00 89.15 O
ATOM 26 OP2 C B 282 45.347 124.573 7.929 1.00 89.10 O
ATOM 27 O5' C B 282 43.626 123.730 6.334 1.00 88.19 O
TER
ATOM 2 P G A 346 57.401 124.362 12.987 1.00 92.27 P
ATOM 3 OP1 G A 346 57.803 123.199 13.820 1.00 92.78 O
ATOM 4 OP2 G A 346 57.313 125.714 13.601 1.00 91.74 O
ATOM 5 O5' G A 346 58.410 124.430 11.756 1.00 93.64 O
ATOM 6 C5' G A 346 58.074 125.188 10.585 1.00 93.86 C
ATOM 7 C4' G A 346 57.552 124.271 9.503 1.00 93.87 C
ATOM 8 O4' G A 346 56.721 125.040 8.595 1.00 94.03 O
ATOM 9 C3' G A 346 58.593 123.573 8.632 1.00 93.67 C
ATOM 10 O3' G A 346 58.026 122.328 8.196 1.00 92.88 O
ATOM 11 C2' G A 346 58.733 124.564 7.477 1.00 93.65 C
ATOM 12 O2' G A 346 59.253 124.000 6.292 1.00 94.20 O
ATOM 13 C1' G A 346 57.277 124.999 7.298 1.00 93.37 C
ATOM 14 N9 G A 346 57.042 126.299 6.679 1.00 92.36 N
ATOM 15 C8 G A 346 57.879 127.389 6.639 1.00 91.95 C
ATOM 16 N7 G A 346 57.355 128.414 6.022 1.00 91.70 N
ATOM 17 C5 G A 346 56.099 127.971 5.629 1.00 92.04 C
ATOM 18 C6 G A 346 55.066 128.640 4.924 1.00 92.79 C
ATOM 19 O6 G A 346 55.051 129.802 4.495 1.00 93.48 O
ATOM 20 N1 G A 346 53.959 127.816 4.737 1.00 93.02 N
ATOM 21 C2 G A 346 53.856 126.517 5.175 1.00 92.35 C
ATOM 22 N2 G A 346 52.707 125.885 4.896 1.00 92.71 N
ATOM 23 N3 G A 346 54.808 125.885 5.836 1.00 91.35 N
ATOM 24 C4 G A 346 55.894 126.667 6.025 1.00 92.03 C
ATOM 25 P U A 347 58.951 121.208 7.494 1.00 92.08 P
ATOM 26 OP1 U A 347 60.273 121.144 8.178 1.00 91.54 O
ATOM 27 OP2 U A 347 58.892 121.433 6.025 1.00 91.74 O
ATOM 28 O5' U A 347 58.165 119.848 7.764 1.00 91.89 O
TER
ATOM 1 O3' G B 280 50.065 126.595 2.177 1.00 88.21 O
ATOM 2 P A B 281 49.904 127.418 3.553 1.00 88.92 P
ATOM 3 OP1 A B 281 48.599 128.138 3.482 1.00 88.16 O
ATOM 4 OP2 A B 281 51.155 128.190 3.797 1.00 87.17 O
ATOM 5 O5' A B 281 49.803 126.269 4.654 1.00 87.66 O
ATOM 6 C5' A B 281 48.571 126.010 5.357 1.00 88.15 C
ATOM 7 C4' A B 281 47.636 125.189 4.498 1.00 88.31 C
ATOM 8 O4' A B 281 48.375 124.119 3.851 1.00 89.01 O
ATOM 9 C3' A B 281 46.526 124.478 5.256 1.00 88.64 C
ATOM 10 O3' A B 281 45.412 125.319 5.536 1.00 88.96 O
ATOM 11 C2' A B 281 46.196 123.317 4.329 1.00 88.39 C
ATOM 12 O2' A B 281 45.390 123.691 3.232 1.00 88.52 O
ATOM 13 C1' A B 281 47.592 122.936 3.833 1.00 88.15 C
ATOM 14 N9 A B 281 48.241 121.958 4.707 1.00 88.53 N
ATOM 15 C8 A B 281 49.429 122.093 5.390 1.00 88.49 C
ATOM 16 N7 A B 281 49.749 121.045 6.106 1.00 88.07 N
ATOM 17 C5 A B 281 48.707 120.156 5.880 1.00 88.33 C
ATOM 18 C6 A B 281 48.453 118.857 6.352 1.00 88.33 C
ATOM 19 N6 A B 281 49.265 118.202 7.189 1.00 87.64 N
ATOM 20 N1 A B 281 47.323 118.246 5.929 1.00 88.09 N
ATOM 21 C2 A B 281 46.512 118.904 5.092 1.00 87.50 C
ATOM 22 N3 A B 281 46.640 120.125 4.582 1.00 87.98 N
ATOM 23 C4 A B 281 47.772 120.704 5.019 1.00 88.34 C
ATOM 24 P C B 282 44.471 124.996 6.801 1.00 89.11 P
ATOM 25 OP1 C B 282 43.534 126.135 6.987 1.00 89.15 O
ATOM 26 OP2 C B 282 45.347 124.573 7.929 1.00 89.10 O
ATOM 27 O5' C B 282 43.626 123.730 6.334 1.00 88.19 O
TER
Atoms:
OP1: (57.803,123.199,13.820)
OP2: (57.313,125.714,13.601)
C3': (58.593,123.573,8.632)
C1': (57.277,124.999,7.298)
C5': (58.074,125.188,10.585)
O6: (55.051,129.802,4.495)
O4': (56.721,125.040,8.595)
C8: (57.879,127.389,6.639)
C2: (53.856,126.517,5.175)
C6: (55.066,128.640,4.924)
C5: (56.099,127.971,5.629)
C4: (55.894,126.667,6.025)
P: (57.401,124.362,12.987)
C4': (57.552,124.271,9.503)
C2': (58.733,124.564,7.477)
O2': (59.253,124.000,6.292)
N1: (53.959,127.816,4.737)
N2: (52.707,125.885,4.896)
N3: (54.808,125.885,5.836)
N7: (57.355,128.414,6.022)
N9: (57.042,126.299,6.679)
O5': (58.410,124.430,11.756)
O3': (58.026,122.328,8.196)
OP2: (57.313,125.714,13.601)
C3': (58.593,123.573,8.632)
C1': (57.277,124.999,7.298)
C5': (58.074,125.188,10.585)
O6: (55.051,129.802,4.495)
O4': (56.721,125.040,8.595)
C8: (57.879,127.389,6.639)
C2: (53.856,126.517,5.175)
C6: (55.066,128.640,4.924)
C5: (56.099,127.971,5.629)
C4: (55.894,126.667,6.025)
P: (57.401,124.362,12.987)
C4': (57.552,124.271,9.503)
C2': (58.733,124.564,7.477)
O2': (59.253,124.000,6.292)
N1: (53.959,127.816,4.737)
N2: (52.707,125.885,4.896)
N3: (54.808,125.885,5.836)
N7: (57.355,128.414,6.022)
N9: (57.042,126.299,6.679)
O5': (58.410,124.430,11.756)
O3': (58.026,122.328,8.196)
OP1: (48.599,128.138,3.482)
OP2: (51.155,128.190,3.797)
C3': (46.526,124.478,5.256)
C1': (47.592,122.936,3.833)
C5': (48.571,126.010,5.357)
O4': (48.375,124.119,3.851)
C8: (49.429,122.093,5.390)
O2': (45.390,123.691,3.232)
C6: (48.453,118.857,6.352)
C5: (48.707,120.156,5.880)
C4: (47.772,120.704,5.019)
P: (49.904,127.418,3.553)
C4': (47.636,125.189,4.498)
C2': (46.196,123.317,4.329)
C2: (46.512,118.904,5.092)
N1: (47.323,118.246,5.929)
N3: (46.640,120.125,4.582)
N6: (49.265,118.202,7.189)
N7: (49.749,121.045,6.106)
N9: (48.241,121.958,4.707)
O5': (49.803,126.269,4.654)
O3': (45.412,125.319,5.536)
OP2: (51.155,128.190,3.797)
C3': (46.526,124.478,5.256)
C1': (47.592,122.936,3.833)
C5': (48.571,126.010,5.357)
O4': (48.375,124.119,3.851)
C8: (49.429,122.093,5.390)
O2': (45.390,123.691,3.232)
C6: (48.453,118.857,6.352)
C5: (48.707,120.156,5.880)
C4: (47.772,120.704,5.019)
P: (49.904,127.418,3.553)
C4': (47.636,125.189,4.498)
C2': (46.196,123.317,4.329)
C2: (46.512,118.904,5.092)
N1: (47.323,118.246,5.929)
N3: (46.640,120.125,4.582)
N6: (49.265,118.202,7.189)
N7: (49.749,121.045,6.106)
N9: (48.241,121.958,4.707)
O5': (49.803,126.269,4.654)
O3': (45.412,125.319,5.536)
Image (generated by PyMOL):