ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ8:01917:01956

Extra

PDB:
ATOM 1 O3' G A1916 116.557 103.065 100.431 1.00 60.91 O
ATOM 2 P G A1917 117.334 104.427 100.772 1.00 62.46 P
ATOM 3 OP1 G A1917 118.745 104.340 100.293 1.00 62.47 O
ATOM 4 OP2 G A1917 117.054 104.748 102.201 1.00 60.73 O
ATOM 5 O5' G A1917 116.562 105.494 99.876 1.00 60.95 O
ATOM 6 C5' G A1917 117.276 106.498 99.154 1.00 55.83 C
ATOM 7 C4' G A1917 116.782 107.869 99.539 1.00 52.47 C
ATOM 8 O4' G A1917 115.559 108.205 98.822 1.00 50.27 O
ATOM 9 C3' G A1917 116.453 108.089 101.020 1.00 51.58 C
ATOM 10 O3' G A1917 116.932 109.386 101.330 1.00 53.10 O
ATOM 11 C2' G A1917 114.926 108.149 101.003 1.00 50.59 C
ATOM 12 O2' G A1917 114.349 108.844 102.090 1.00 49.90 O
ATOM 13 C1' G A1917 114.741 108.924 99.708 1.00 48.87 C
ATOM 14 N9 G A1917 113.407 109.087 99.148 1.00 46.49 N
ATOM 15 C8 G A1917 112.316 108.266 99.293 1.00 46.56 C
ATOM 16 N7 G A1917 111.256 108.719 98.681 1.00 47.05 N
ATOM 17 C5 G A1917 111.677 109.906 98.091 1.00 43.63 C
ATOM 18 C6 G A1917 110.969 110.837 97.292 1.00 43.56 C
ATOM 19 O6 G A1917 109.792 110.792 96.915 1.00 44.04 O
ATOM 20 N1 G A1917 111.777 111.907 96.918 1.00 44.17 N
ATOM 21 C2 G A1917 113.098 112.055 97.257 1.00 42.14 C
ATOM 22 N2 G A1917 113.705 113.163 96.808 1.00 41.08 N
ATOM 23 N3 G A1917 113.771 111.184 97.984 1.00 42.03 N
ATOM 24 C4 G A1917 113.001 110.144 98.368 1.00 43.66 C
ATOM 25 P U A1918 117.102 109.843 102.854 1.00 54.15 P
ATOM 26 OP1 U A1918 117.231 108.657 103.740 1.00 56.33 O
ATOM 27 OP2 U A1918 116.024 110.833 103.111 1.00 53.50 O
ATOM 28 O5' U A1918 118.504 110.600 102.821 1.00 54.32 O
TER

ATOM 1 O3' G B1955 110.900 116.284 95.784 1.00 40.35 O
ATOM 2 P A B1956 111.098 115.103 94.707 1.00 39.91 P
ATOM 3 OP1 A B1956 110.551 115.594 93.412 1.00 39.29 O
ATOM 4 OP2 A B1956 110.580 113.835 95.285 1.00 39.42 O
ATOM 5 O5' A B1956 112.684 114.976 94.586 1.00 38.33 O
ATOM 6 C5' A B1956 113.402 115.609 93.502 1.00 39.80 C
ATOM 7 C4' A B1956 113.631 117.075 93.804 1.00 40.27 C
ATOM 8 O4' A B1956 114.174 117.215 95.143 1.00 40.57 O
ATOM 9 C3' A B1956 114.630 117.792 92.905 1.00 41.08 C
ATOM 10 O3' A B1956 114.016 118.266 91.699 1.00 42.33 O
ATOM 11 C2' A B1956 115.081 118.958 93.785 1.00 40.91 C
ATOM 12 O2' A B1956 114.177 120.047 93.743 1.00 41.48 O
ATOM 13 C1' A B1956 115.046 118.331 95.186 1.00 40.37 C
ATOM 14 N9 A B1956 116.337 117.891 95.718 1.00 41.04 N
ATOM 15 C8 A B1956 116.739 116.607 95.987 1.00 40.41 C
ATOM 16 N7 A B1956 117.950 116.526 96.481 1.00 43.36 N
ATOM 17 C5 A B1956 118.378 117.845 96.536 1.00 41.77 C
ATOM 18 C6 A B1956 119.581 118.430 96.964 1.00 42.54 C
ATOM 19 N6 A B1956 120.620 117.735 97.430 1.00 44.55 N
ATOM 20 N1 A B1956 119.686 119.774 96.892 1.00 42.77 N
ATOM 21 C2 A B1956 118.651 120.473 96.411 1.00 41.87 C
ATOM 22 N3 A B1956 117.472 120.038 95.974 1.00 41.32 N
ATOM 23 C4 A B1956 117.397 118.697 96.067 1.00 41.35 C
ATOM 24 P A B1957 114.439 117.641 90.281 1.00 45.07 P
ATOM 25 OP1 A B1957 113.546 116.479 90.071 1.00 47.71 O
ATOM 26 OP2 A B1957 115.907 117.442 90.264 1.00 49.21 O
ATOM 27 O5' A B1957 114.046 118.757 89.200 1.00 43.61 O
TER

Atoms:
OP1: (118.745,104.340,100.293)
OP2: (117.054,104.748,102.201)
C3': (116.453,108.089,101.020)
C1': (114.741,108.924,99.708)
C5': (117.276,106.498,99.154)
O6: (109.792,110.792,96.915)
O4': (115.559,108.205,98.822)
C8: (112.316,108.266,99.293)
C2: (113.098,112.055,97.257)
C6: (110.969,110.837,97.292)
C5: (111.677,109.906,98.091)
C4: (113.001,110.144,98.368)
P: (117.334,104.427,100.772)
C4': (116.782,107.869,99.539)
C2': (114.926,108.149,101.003)
O2': (114.349,108.844,102.090)
N1: (111.777,111.907,96.918)
N2: (113.705,113.163,96.808)
N3: (113.771,111.184,97.984)
N7: (111.256,108.719,98.681)
N9: (113.407,109.087,99.148)
O5': (116.562,105.494,99.876)
O3': (116.932,109.386,101.330)
OP1: (110.551,115.594,93.412)
OP2: (110.580,113.835,95.285)
C3': (114.630,117.792,92.905)
C1': (115.046,118.331,95.186)
C5': (113.402,115.609,93.502)
O4': (114.174,117.215,95.143)
C8: (116.739,116.607,95.987)
O2': (114.177,120.047,93.743)
C6: (119.581,118.430,96.964)
C5: (118.378,117.845,96.536)
C4: (117.397,118.697,96.067)
P: (111.098,115.103,94.707)
C4': (113.631,117.075,93.804)
C2': (115.081,118.958,93.785)
C2: (118.651,120.473,96.411)
N1: (119.686,119.774,96.892)
N3: (117.472,120.038,95.974)
N6: (120.620,117.735,97.430)
N7: (117.950,116.526,96.481)
N9: (116.337,117.891,95.718)
O5': (112.684,114.976,94.586)
O3': (114.016,118.266,91.699)
Image (generated by PyMOL):
PyMOL image
show in jmol