Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A1922:A1961
Extra
PDB:
ATOM 1 O3' G A1921 -45.847 124.141 110.261 1.00 23.81 O
ATOM 2 P G A1922 -44.794 123.454 109.288 1.00 15.78 P
ATOM 3 OP1 G A1922 -44.061 124.570 108.592 1.00 15.78 O
ATOM 4 OP2 G A1922 -45.524 122.430 108.477 1.00 15.78 O
ATOM 5 O5' G A1922 -43.842 122.728 110.306 1.00 15.78 O
ATOM 6 C5' G A1922 -42.827 123.445 110.976 1.00 15.78 C
ATOM 7 C4' G A1922 -41.830 122.506 111.544 1.00 15.78 C
ATOM 8 O4' G A1922 -41.384 123.018 112.822 1.00 15.78 O
ATOM 9 C3' G A1922 -42.384 121.113 111.827 1.00 15.78 C
ATOM 10 O3' G A1922 -41.349 120.148 111.661 1.00 15.78 O
ATOM 11 C2' G A1922 -42.753 121.213 113.293 1.00 15.78 C
ATOM 12 O2' G A1922 -42.869 119.978 113.951 1.00 15.78 O
ATOM 13 C1' G A1922 -41.568 122.018 113.789 1.00 15.78 C
ATOM 14 N9 G A1922 -41.737 122.649 115.078 1.00 14.92 N
ATOM 15 C8 G A1922 -42.851 123.023 115.766 1.00 14.92 C
ATOM 16 N7 G A1922 -42.541 123.553 116.913 1.00 14.92 N
ATOM 17 C5 G A1922 -41.141 123.501 116.954 1.00 14.92 C
ATOM 18 C6 G A1922 -40.206 123.927 117.925 1.00 14.92 C
ATOM 19 O6 G A1922 -40.456 124.460 119.006 1.00 14.92 O
ATOM 20 N1 G A1922 -38.889 123.703 117.550 1.00 14.92 N
ATOM 21 C2 G A1922 -38.523 123.142 116.376 1.00 14.92 C
ATOM 22 N2 G A1922 -37.222 123.010 116.179 1.00 14.92 N
ATOM 23 N3 G A1922 -39.365 122.743 115.459 1.00 14.92 N
ATOM 24 C4 G A1922 -40.642 122.948 115.820 1.00 14.92 C
ATOM 25 P U A1923 -41.710 118.593 111.605 1.00 20.12 P
ATOM 26 OP1 U A1923 -42.990 118.465 110.881 1.00 20.12 O
ATOM 27 OP2 U A1923 -41.632 118.084 112.977 1.00 20.12 O
ATOM 28 O5' U A1923 -40.526 117.988 110.724 1.00 20.12 O
TER
ATOM 1 O3' G B1960 -34.617 122.983 119.333 1.00 0.07 O
ATOM 2 P A B1961 -35.078 124.482 119.003 1.00 0.01 P
ATOM 3 OP1 A B1961 -34.149 125.381 119.737 1.00 0.01 O
ATOM 4 OP2 A B1961 -36.533 124.553 119.279 1.00 0.01 O
ATOM 5 O5' A B1961 -34.825 124.624 117.441 1.00 0.01 O
ATOM 6 C5' A B1961 -33.619 125.162 116.947 1.00 0.01 C
ATOM 7 C4' A B1961 -32.480 124.214 117.160 1.00 0.01 C
ATOM 8 O4' A B1961 -32.816 122.919 116.628 1.00 0.01 O
ATOM 9 C3' A B1961 -31.184 124.582 116.478 1.00 0.01 C
ATOM 10 O3' A B1961 -30.430 125.486 117.248 1.00 0.01 O
ATOM 11 C2' A B1961 -30.486 123.248 116.288 1.00 0.01 C
ATOM 12 O2' A B1961 -29.696 122.945 117.415 1.00 0.01 O
ATOM 13 C1' A B1961 -31.650 122.253 116.224 1.00 0.01 C
ATOM 14 N9 A B1961 -31.853 121.715 114.867 1.00 0.01 N
ATOM 15 C8 A B1961 -32.965 121.785 114.071 1.00 0.01 C
ATOM 16 N7 A B1961 -32.818 121.203 112.910 1.00 0.01 N
ATOM 17 C5 A B1961 -31.525 120.707 112.946 1.00 0.01 C
ATOM 18 C6 A B1961 -30.745 119.985 112.021 1.00 0.01 C
ATOM 19 N6 A B1961 -31.171 119.601 110.820 1.00 0.01 N
ATOM 20 N1 A B1961 -29.486 119.649 112.380 1.00 0.01 N
ATOM 21 C2 A B1961 -29.033 120.017 113.587 1.00 0.01 C
ATOM 22 N3 A B1961 -29.674 120.694 114.542 1.00 0.01 N
ATOM 23 C4 A B1961 -30.923 121.010 114.151 1.00 0.01 C
ATOM 24 P A B1962 -30.290 127.019 116.790 1.00 9.01 P
ATOM 25 OP1 A B1962 -30.874 127.877 117.885 1.00 9.01 O
ATOM 26 OP2 A B1962 -30.855 127.110 115.436 1.00 9.01 O
ATOM 27 O5' A B1962 -28.714 127.214 116.727 1.00 9.01 O
TER
ATOM 2 P G A1922 -44.794 123.454 109.288 1.00 15.78 P
ATOM 3 OP1 G A1922 -44.061 124.570 108.592 1.00 15.78 O
ATOM 4 OP2 G A1922 -45.524 122.430 108.477 1.00 15.78 O
ATOM 5 O5' G A1922 -43.842 122.728 110.306 1.00 15.78 O
ATOM 6 C5' G A1922 -42.827 123.445 110.976 1.00 15.78 C
ATOM 7 C4' G A1922 -41.830 122.506 111.544 1.00 15.78 C
ATOM 8 O4' G A1922 -41.384 123.018 112.822 1.00 15.78 O
ATOM 9 C3' G A1922 -42.384 121.113 111.827 1.00 15.78 C
ATOM 10 O3' G A1922 -41.349 120.148 111.661 1.00 15.78 O
ATOM 11 C2' G A1922 -42.753 121.213 113.293 1.00 15.78 C
ATOM 12 O2' G A1922 -42.869 119.978 113.951 1.00 15.78 O
ATOM 13 C1' G A1922 -41.568 122.018 113.789 1.00 15.78 C
ATOM 14 N9 G A1922 -41.737 122.649 115.078 1.00 14.92 N
ATOM 15 C8 G A1922 -42.851 123.023 115.766 1.00 14.92 C
ATOM 16 N7 G A1922 -42.541 123.553 116.913 1.00 14.92 N
ATOM 17 C5 G A1922 -41.141 123.501 116.954 1.00 14.92 C
ATOM 18 C6 G A1922 -40.206 123.927 117.925 1.00 14.92 C
ATOM 19 O6 G A1922 -40.456 124.460 119.006 1.00 14.92 O
ATOM 20 N1 G A1922 -38.889 123.703 117.550 1.00 14.92 N
ATOM 21 C2 G A1922 -38.523 123.142 116.376 1.00 14.92 C
ATOM 22 N2 G A1922 -37.222 123.010 116.179 1.00 14.92 N
ATOM 23 N3 G A1922 -39.365 122.743 115.459 1.00 14.92 N
ATOM 24 C4 G A1922 -40.642 122.948 115.820 1.00 14.92 C
ATOM 25 P U A1923 -41.710 118.593 111.605 1.00 20.12 P
ATOM 26 OP1 U A1923 -42.990 118.465 110.881 1.00 20.12 O
ATOM 27 OP2 U A1923 -41.632 118.084 112.977 1.00 20.12 O
ATOM 28 O5' U A1923 -40.526 117.988 110.724 1.00 20.12 O
TER
ATOM 1 O3' G B1960 -34.617 122.983 119.333 1.00 0.07 O
ATOM 2 P A B1961 -35.078 124.482 119.003 1.00 0.01 P
ATOM 3 OP1 A B1961 -34.149 125.381 119.737 1.00 0.01 O
ATOM 4 OP2 A B1961 -36.533 124.553 119.279 1.00 0.01 O
ATOM 5 O5' A B1961 -34.825 124.624 117.441 1.00 0.01 O
ATOM 6 C5' A B1961 -33.619 125.162 116.947 1.00 0.01 C
ATOM 7 C4' A B1961 -32.480 124.214 117.160 1.00 0.01 C
ATOM 8 O4' A B1961 -32.816 122.919 116.628 1.00 0.01 O
ATOM 9 C3' A B1961 -31.184 124.582 116.478 1.00 0.01 C
ATOM 10 O3' A B1961 -30.430 125.486 117.248 1.00 0.01 O
ATOM 11 C2' A B1961 -30.486 123.248 116.288 1.00 0.01 C
ATOM 12 O2' A B1961 -29.696 122.945 117.415 1.00 0.01 O
ATOM 13 C1' A B1961 -31.650 122.253 116.224 1.00 0.01 C
ATOM 14 N9 A B1961 -31.853 121.715 114.867 1.00 0.01 N
ATOM 15 C8 A B1961 -32.965 121.785 114.071 1.00 0.01 C
ATOM 16 N7 A B1961 -32.818 121.203 112.910 1.00 0.01 N
ATOM 17 C5 A B1961 -31.525 120.707 112.946 1.00 0.01 C
ATOM 18 C6 A B1961 -30.745 119.985 112.021 1.00 0.01 C
ATOM 19 N6 A B1961 -31.171 119.601 110.820 1.00 0.01 N
ATOM 20 N1 A B1961 -29.486 119.649 112.380 1.00 0.01 N
ATOM 21 C2 A B1961 -29.033 120.017 113.587 1.00 0.01 C
ATOM 22 N3 A B1961 -29.674 120.694 114.542 1.00 0.01 N
ATOM 23 C4 A B1961 -30.923 121.010 114.151 1.00 0.01 C
ATOM 24 P A B1962 -30.290 127.019 116.790 1.00 9.01 P
ATOM 25 OP1 A B1962 -30.874 127.877 117.885 1.00 9.01 O
ATOM 26 OP2 A B1962 -30.855 127.110 115.436 1.00 9.01 O
ATOM 27 O5' A B1962 -28.714 127.214 116.727 1.00 9.01 O
TER
Atoms:
OP1: (-44.061,124.570,108.592)
OP2: (-45.524,122.430,108.477)
C3': (-42.384,121.113,111.827)
C1': (-41.568,122.018,113.789)
C5': (-42.827,123.445,110.976)
O6: (-40.456,124.460,119.006)
O4': (-41.384,123.018,112.822)
C8: (-42.851,123.023,115.766)
C2: (-38.523,123.142,116.376)
C6: (-40.206,123.927,117.925)
C5: (-41.141,123.501,116.954)
C4: (-40.642,122.948,115.820)
P: (-44.794,123.454,109.288)
C4': (-41.830,122.506,111.544)
C2': (-42.753,121.213,113.293)
O2': (-42.869,119.978,113.951)
N1: (-38.889,123.703,117.550)
N2: (-37.222,123.010,116.179)
N3: (-39.365,122.743,115.459)
N7: (-42.541,123.553,116.913)
N9: (-41.737,122.649,115.078)
O5': (-43.842,122.728,110.306)
O3': (-41.349,120.148,111.661)
OP2: (-45.524,122.430,108.477)
C3': (-42.384,121.113,111.827)
C1': (-41.568,122.018,113.789)
C5': (-42.827,123.445,110.976)
O6: (-40.456,124.460,119.006)
O4': (-41.384,123.018,112.822)
C8: (-42.851,123.023,115.766)
C2: (-38.523,123.142,116.376)
C6: (-40.206,123.927,117.925)
C5: (-41.141,123.501,116.954)
C4: (-40.642,122.948,115.820)
P: (-44.794,123.454,109.288)
C4': (-41.830,122.506,111.544)
C2': (-42.753,121.213,113.293)
O2': (-42.869,119.978,113.951)
N1: (-38.889,123.703,117.550)
N2: (-37.222,123.010,116.179)
N3: (-39.365,122.743,115.459)
N7: (-42.541,123.553,116.913)
N9: (-41.737,122.649,115.078)
O5': (-43.842,122.728,110.306)
O3': (-41.349,120.148,111.661)
OP1: (-34.149,125.381,119.737)
OP2: (-36.533,124.553,119.279)
C3': (-31.184,124.582,116.478)
C1': (-31.650,122.253,116.224)
C5': (-33.619,125.162,116.947)
O4': (-32.816,122.919,116.628)
C8: (-32.965,121.785,114.071)
O2': (-29.696,122.945,117.415)
C6: (-30.745,119.985,112.021)
C5: (-31.525,120.707,112.946)
C4: (-30.923,121.010,114.151)
P: (-35.078,124.482,119.003)
C4': (-32.480,124.214,117.160)
C2': (-30.486,123.248,116.288)
C2: (-29.033,120.017,113.587)
N1: (-29.486,119.649,112.380)
N3: (-29.674,120.694,114.542)
N6: (-31.171,119.601,110.820)
N7: (-32.818,121.203,112.910)
N9: (-31.853,121.715,114.867)
O5': (-34.825,124.624,117.441)
O3': (-30.430,125.486,117.248)
OP2: (-36.533,124.553,119.279)
C3': (-31.184,124.582,116.478)
C1': (-31.650,122.253,116.224)
C5': (-33.619,125.162,116.947)
O4': (-32.816,122.919,116.628)
C8: (-32.965,121.785,114.071)
O2': (-29.696,122.945,117.415)
C6: (-30.745,119.985,112.021)
C5: (-31.525,120.707,112.946)
C4: (-30.923,121.010,114.151)
P: (-35.078,124.482,119.003)
C4': (-32.480,124.214,117.160)
C2': (-30.486,123.248,116.288)
C2: (-29.033,120.017,113.587)
N1: (-29.486,119.649,112.380)
N3: (-29.674,120.694,114.542)
N6: (-31.171,119.601,110.820)
N7: (-32.818,121.203,112.910)
N9: (-31.853,121.715,114.867)
O5': (-34.825,124.624,117.441)
O3': (-30.430,125.486,117.248)
Image (generated by PyMOL):