Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2PXD:B32:B18
Extra
PDB:
ATOM 1 O3' A A 31 96.704 -32.668 40.192 1.00 35.36 O
ATOM 2 P G A 32 97.488 -31.959 41.396 1.00 35.59 P
ATOM 3 OP1 G A 32 98.908 -31.869 40.967 1.00 37.20 O
ATOM 4 OP2 G A 32 97.137 -32.666 42.656 1.00 34.76 O
ATOM 5 O5' G A 32 96.880 -30.488 41.457 1.00 32.02 O
ATOM 6 C5' G A 32 97.207 -29.545 40.453 1.00 29.04 C
ATOM 7 C4' G A 32 96.187 -28.438 40.411 1.00 28.14 C
ATOM 8 O4' G A 32 94.874 -29.012 40.609 1.00 28.45 O
ATOM 9 C3' G A 32 96.230 -27.370 41.488 1.00 28.22 C
ATOM 10 O3' G A 32 97.195 -26.369 41.164 1.00 29.61 O
ATOM 11 C2' G A 32 94.838 -26.765 41.360 1.00 27.01 C
ATOM 12 O2' G A 32 94.782 -25.868 40.274 1.00 29.29 O
ATOM 13 C1' G A 32 93.988 -27.994 41.041 1.00 25.05 C
ATOM 14 N9 G A 32 93.247 -28.466 42.200 1.00 21.37 N
ATOM 15 C8 G A 32 93.437 -29.628 42.907 1.00 20.92 C
ATOM 16 N7 G A 32 92.652 -29.726 43.946 1.00 20.27 N
ATOM 17 C5 G A 32 91.892 -28.564 43.908 1.00 20.20 C
ATOM 18 C6 G A 32 90.895 -28.098 44.792 1.00 21.95 C
ATOM 19 O6 G A 32 90.480 -28.625 45.833 1.00 24.67 O
ATOM 20 N1 G A 32 90.372 -26.877 44.377 1.00 22.72 N
ATOM 21 C2 G A 32 90.776 -26.187 43.257 1.00 22.68 C
ATOM 22 N2 G A 32 90.162 -25.009 43.026 1.00 22.45 N
ATOM 23 N3 G A 32 91.716 -26.614 42.429 1.00 21.48 N
ATOM 24 C4 G A 32 92.230 -27.796 42.820 1.00 20.43 C
ATOM 25 P C A 33 97.800 -25.421 42.321 1.00 28.01 P
ATOM 26 OP1 C A 33 99.272 -25.613 42.286 1.00 27.63 O
ATOM 27 OP2 C A 33 97.055 -25.665 43.581 1.00 26.14 O
ATOM 28 O5' C A 33 97.467 -23.939 41.841 1.00 24.64 O
TER
ATOM 1 O3' C B 17 88.322 -25.529 48.293 1.00 65.59 O
ATOM 2 P A B 18 87.408 -25.410 46.972 1.00 71.46 P
ATOM 3 OP1 A B 18 86.292 -26.391 47.123 1.00 51.65 O
ATOM 4 OP2 A B 18 88.316 -25.505 45.782 1.00 51.06 O
ATOM 5 O5' A B 18 86.819 -23.928 47.100 1.00 64.79 O
ATOM 6 C5' A B 18 86.300 -23.468 48.350 1.00 57.09 C
ATOM 7 C4' A B 18 85.941 -22.002 48.276 1.00 51.90 C
ATOM 8 O4' A B 18 87.132 -21.180 48.338 1.00 48.21 O
ATOM 9 C3' A B 18 85.264 -21.567 46.997 1.00 51.02 C
ATOM 10 O3' A B 18 83.888 -21.888 47.014 1.00 52.48 O
ATOM 11 C2' A B 18 85.537 -20.069 46.983 1.00 47.95 C
ATOM 12 O2' A B 18 84.686 -19.337 47.835 1.00 46.02 O
ATOM 13 C1' A B 18 86.966 -20.028 47.523 1.00 44.28 C
ATOM 14 N9 A B 18 87.974 -20.086 46.466 1.00 20.52 N
ATOM 15 C8 A B 18 88.700 -21.190 46.102 1.00 18.70 C
ATOM 16 N7 A B 18 89.542 -20.968 45.126 1.00 17.24 N
ATOM 17 C5 A B 18 89.361 -19.629 44.828 1.00 13.00 C
ATOM 18 C6 A B 18 89.972 -18.791 43.898 1.00 12.00 C
ATOM 19 N6 A B 18 90.942 -19.190 43.071 1.00 8.24 N
ATOM 20 N1 A B 18 89.561 -17.503 43.848 1.00 13.14 N
ATOM 21 C2 A B 18 88.609 -17.105 44.695 1.00 10.87 C
ATOM 22 N3 A B 18 87.969 -17.801 45.625 1.00 14.50 N
ATOM 23 C4 A B 18 88.395 -19.073 45.640 1.00 14.88 C
ATOM 24 P G B 19 83.230 -22.574 45.724 1.00 43.57 P
ATOM 25 OP1 G B 19 81.760 -22.539 45.945 1.00 38.61 O
ATOM 26 OP2 G B 19 83.902 -23.872 45.449 1.00 34.48 O
ATOM 27 O5' G B 19 83.602 -21.571 44.549 1.00 38.53 O
TER
ATOM 2 P G A 32 97.488 -31.959 41.396 1.00 35.59 P
ATOM 3 OP1 G A 32 98.908 -31.869 40.967 1.00 37.20 O
ATOM 4 OP2 G A 32 97.137 -32.666 42.656 1.00 34.76 O
ATOM 5 O5' G A 32 96.880 -30.488 41.457 1.00 32.02 O
ATOM 6 C5' G A 32 97.207 -29.545 40.453 1.00 29.04 C
ATOM 7 C4' G A 32 96.187 -28.438 40.411 1.00 28.14 C
ATOM 8 O4' G A 32 94.874 -29.012 40.609 1.00 28.45 O
ATOM 9 C3' G A 32 96.230 -27.370 41.488 1.00 28.22 C
ATOM 10 O3' G A 32 97.195 -26.369 41.164 1.00 29.61 O
ATOM 11 C2' G A 32 94.838 -26.765 41.360 1.00 27.01 C
ATOM 12 O2' G A 32 94.782 -25.868 40.274 1.00 29.29 O
ATOM 13 C1' G A 32 93.988 -27.994 41.041 1.00 25.05 C
ATOM 14 N9 G A 32 93.247 -28.466 42.200 1.00 21.37 N
ATOM 15 C8 G A 32 93.437 -29.628 42.907 1.00 20.92 C
ATOM 16 N7 G A 32 92.652 -29.726 43.946 1.00 20.27 N
ATOM 17 C5 G A 32 91.892 -28.564 43.908 1.00 20.20 C
ATOM 18 C6 G A 32 90.895 -28.098 44.792 1.00 21.95 C
ATOM 19 O6 G A 32 90.480 -28.625 45.833 1.00 24.67 O
ATOM 20 N1 G A 32 90.372 -26.877 44.377 1.00 22.72 N
ATOM 21 C2 G A 32 90.776 -26.187 43.257 1.00 22.68 C
ATOM 22 N2 G A 32 90.162 -25.009 43.026 1.00 22.45 N
ATOM 23 N3 G A 32 91.716 -26.614 42.429 1.00 21.48 N
ATOM 24 C4 G A 32 92.230 -27.796 42.820 1.00 20.43 C
ATOM 25 P C A 33 97.800 -25.421 42.321 1.00 28.01 P
ATOM 26 OP1 C A 33 99.272 -25.613 42.286 1.00 27.63 O
ATOM 27 OP2 C A 33 97.055 -25.665 43.581 1.00 26.14 O
ATOM 28 O5' C A 33 97.467 -23.939 41.841 1.00 24.64 O
TER
ATOM 1 O3' C B 17 88.322 -25.529 48.293 1.00 65.59 O
ATOM 2 P A B 18 87.408 -25.410 46.972 1.00 71.46 P
ATOM 3 OP1 A B 18 86.292 -26.391 47.123 1.00 51.65 O
ATOM 4 OP2 A B 18 88.316 -25.505 45.782 1.00 51.06 O
ATOM 5 O5' A B 18 86.819 -23.928 47.100 1.00 64.79 O
ATOM 6 C5' A B 18 86.300 -23.468 48.350 1.00 57.09 C
ATOM 7 C4' A B 18 85.941 -22.002 48.276 1.00 51.90 C
ATOM 8 O4' A B 18 87.132 -21.180 48.338 1.00 48.21 O
ATOM 9 C3' A B 18 85.264 -21.567 46.997 1.00 51.02 C
ATOM 10 O3' A B 18 83.888 -21.888 47.014 1.00 52.48 O
ATOM 11 C2' A B 18 85.537 -20.069 46.983 1.00 47.95 C
ATOM 12 O2' A B 18 84.686 -19.337 47.835 1.00 46.02 O
ATOM 13 C1' A B 18 86.966 -20.028 47.523 1.00 44.28 C
ATOM 14 N9 A B 18 87.974 -20.086 46.466 1.00 20.52 N
ATOM 15 C8 A B 18 88.700 -21.190 46.102 1.00 18.70 C
ATOM 16 N7 A B 18 89.542 -20.968 45.126 1.00 17.24 N
ATOM 17 C5 A B 18 89.361 -19.629 44.828 1.00 13.00 C
ATOM 18 C6 A B 18 89.972 -18.791 43.898 1.00 12.00 C
ATOM 19 N6 A B 18 90.942 -19.190 43.071 1.00 8.24 N
ATOM 20 N1 A B 18 89.561 -17.503 43.848 1.00 13.14 N
ATOM 21 C2 A B 18 88.609 -17.105 44.695 1.00 10.87 C
ATOM 22 N3 A B 18 87.969 -17.801 45.625 1.00 14.50 N
ATOM 23 C4 A B 18 88.395 -19.073 45.640 1.00 14.88 C
ATOM 24 P G B 19 83.230 -22.574 45.724 1.00 43.57 P
ATOM 25 OP1 G B 19 81.760 -22.539 45.945 1.00 38.61 O
ATOM 26 OP2 G B 19 83.902 -23.872 45.449 1.00 34.48 O
ATOM 27 O5' G B 19 83.602 -21.571 44.549 1.00 38.53 O
TER
Atoms:
OP1: (98.908,-31.869,40.967)
OP2: (97.137,-32.666,42.656)
C3': (96.230,-27.370,41.488)
C1': (93.988,-27.994,41.041)
C5': (97.207,-29.545,40.453)
O6: (90.480,-28.625,45.833)
O4': (94.874,-29.012,40.609)
C8: (93.437,-29.628,42.907)
C2: (90.776,-26.187,43.257)
C6: (90.895,-28.098,44.792)
C5: (91.892,-28.564,43.908)
C4: (92.230,-27.796,42.820)
P: (97.488,-31.959,41.396)
C4': (96.187,-28.438,40.411)
C2': (94.838,-26.765,41.360)
O2': (94.782,-25.868,40.274)
N1: (90.372,-26.877,44.377)
N2: (90.162,-25.009,43.026)
N3: (91.716,-26.614,42.429)
N7: (92.652,-29.726,43.946)
N9: (93.247,-28.466,42.200)
O5': (96.880,-30.488,41.457)
O3': (97.195,-26.369,41.164)
OP2: (97.137,-32.666,42.656)
C3': (96.230,-27.370,41.488)
C1': (93.988,-27.994,41.041)
C5': (97.207,-29.545,40.453)
O6: (90.480,-28.625,45.833)
O4': (94.874,-29.012,40.609)
C8: (93.437,-29.628,42.907)
C2: (90.776,-26.187,43.257)
C6: (90.895,-28.098,44.792)
C5: (91.892,-28.564,43.908)
C4: (92.230,-27.796,42.820)
P: (97.488,-31.959,41.396)
C4': (96.187,-28.438,40.411)
C2': (94.838,-26.765,41.360)
O2': (94.782,-25.868,40.274)
N1: (90.372,-26.877,44.377)
N2: (90.162,-25.009,43.026)
N3: (91.716,-26.614,42.429)
N7: (92.652,-29.726,43.946)
N9: (93.247,-28.466,42.200)
O5': (96.880,-30.488,41.457)
O3': (97.195,-26.369,41.164)
OP1: (86.292,-26.391,47.123)
OP2: (88.316,-25.505,45.782)
C3': (85.264,-21.567,46.997)
C1': (86.966,-20.028,47.523)
C5': (86.300,-23.468,48.350)
O4': (87.132,-21.180,48.338)
C8: (88.700,-21.190,46.102)
O2': (84.686,-19.337,47.835)
C6: (89.972,-18.791,43.898)
C5: (89.361,-19.629,44.828)
C4: (88.395,-19.073,45.640)
P: (87.408,-25.410,46.972)
C4': (85.941,-22.002,48.276)
C2': (85.537,-20.069,46.983)
C2: (88.609,-17.105,44.695)
N1: (89.561,-17.503,43.848)
N3: (87.969,-17.801,45.625)
N6: (90.942,-19.190,43.071)
N7: (89.542,-20.968,45.126)
N9: (87.974,-20.086,46.466)
O5': (86.819,-23.928,47.100)
O3': (83.888,-21.888,47.014)
OP2: (88.316,-25.505,45.782)
C3': (85.264,-21.567,46.997)
C1': (86.966,-20.028,47.523)
C5': (86.300,-23.468,48.350)
O4': (87.132,-21.180,48.338)
C8: (88.700,-21.190,46.102)
O2': (84.686,-19.337,47.835)
C6: (89.972,-18.791,43.898)
C5: (89.361,-19.629,44.828)
C4: (88.395,-19.073,45.640)
P: (87.408,-25.410,46.972)
C4': (85.941,-22.002,48.276)
C2': (85.537,-20.069,46.983)
C2: (88.609,-17.105,44.695)
N1: (89.561,-17.503,43.848)
N3: (87.969,-17.801,45.625)
N6: (90.942,-19.190,43.071)
N7: (89.542,-20.968,45.126)
N9: (87.974,-20.086,46.466)
O5': (86.819,-23.928,47.100)
O3': (83.888,-21.888,47.014)
Image (generated by PyMOL):