Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A472:A484
Extra
PDB:
ATOM 1 O3' A A 471 46.448 -72.233 -45.008 1.00 44.37 O
ATOM 2 P G A 472 45.809 -71.755 -46.389 1.00 49.26 P
ATOM 3 OP1 G A 472 44.397 -71.366 -46.110 1.00 40.17 O
ATOM 4 OP2 G A 472 46.114 -72.849 -47.372 1.00 43.11 O
ATOM 5 O5' G A 472 46.672 -70.459 -46.748 1.00 47.25 O
ATOM 6 C5' G A 472 46.487 -69.224 -46.058 1.00 35.26 C
ATOM 7 C4' G A 472 47.040 -69.316 -44.655 1.00 41.90 C
ATOM 8 O4' G A 472 48.408 -69.812 -44.689 1.00 40.80 O
ATOM 9 C3' G A 472 47.078 -67.991 -43.891 1.00 43.74 C
ATOM 10 O3' G A 472 46.705 -68.220 -42.519 1.00 39.08 O
ATOM 11 C2' G A 472 48.550 -67.588 -44.011 1.00 46.68 C
ATOM 12 O2' G A 472 49.025 -66.726 -42.998 1.00 46.48 O
ATOM 13 C1' G A 472 49.226 -68.950 -43.932 1.00 44.60 C
ATOM 14 N9 G A 472 50.609 -69.015 -44.397 1.00 43.21 N
ATOM 15 C8 G A 472 51.095 -68.842 -45.672 1.00 40.47 C
ATOM 16 N7 G A 472 52.397 -68.948 -45.741 1.00 44.90 N
ATOM 17 C5 G A 472 52.792 -69.207 -44.433 1.00 48.46 C
ATOM 18 C6 G A 472 54.094 -69.405 -43.874 1.00 51.57 C
ATOM 19 O6 G A 472 55.197 -69.395 -44.446 1.00 57.34 O
ATOM 20 N1 G A 472 54.030 -69.625 -42.499 1.00 52.64 N
ATOM 21 C2 G A 472 52.872 -69.649 -41.755 1.00 54.46 C
ATOM 22 N2 G A 472 53.016 -69.854 -40.433 1.00 49.24 N
ATOM 23 N3 G A 472 51.663 -69.475 -42.264 1.00 55.69 N
ATOM 24 C4 G A 472 51.698 -69.257 -43.596 1.00 48.73 C
ATOM 25 P U A 473 46.052 -67.027 -41.642 1.00 48.19 P
ATOM 26 OP1 U A 473 45.201 -66.150 -42.515 1.00 39.51 O
ATOM 27 OP2 U A 473 47.131 -66.415 -40.819 1.00 45.89 O
ATOM 28 O5' U A 473 45.095 -67.793 -40.617 1.00 48.51 O
TER
ATOM 1 O3' G B 483 56.049 -70.521 -37.737 1.00 36.11 O
ATOM 2 P A B 484 56.165 -71.460 -39.029 1.00 40.33 P
ATOM 3 OP1 A B 484 57.505 -72.091 -38.986 1.00 48.78 O
ATOM 4 OP2 A B 484 55.735 -70.720 -40.251 1.00 40.79 O
ATOM 5 O5' A B 484 55.089 -72.601 -38.774 1.00 41.54 O
ATOM 6 C5' A B 484 54.117 -72.449 -37.760 1.00 44.62 C
ATOM 7 C4' A B 484 54.581 -73.084 -36.472 1.00 44.99 C
ATOM 8 O4' A B 484 53.729 -72.586 -35.422 1.00 50.61 O
ATOM 9 C3' A B 484 54.479 -74.607 -36.455 1.00 47.62 C
ATOM 10 O3' A B 484 55.760 -75.207 -36.746 1.00 47.00 O
ATOM 11 C2' A B 484 53.998 -74.913 -35.039 1.00 49.54 C
ATOM 12 O2' A B 484 55.060 -75.071 -34.122 1.00 52.86 O
ATOM 13 C1' A B 484 53.179 -73.662 -34.698 1.00 55.79 C
ATOM 14 N9 A B 484 51.756 -73.751 -35.044 1.00 54.81 N
ATOM 15 C8 A B 484 51.128 -73.193 -36.130 1.00 52.06 C
ATOM 16 N7 A B 484 49.853 -73.473 -36.205 1.00 54.73 N
ATOM 17 C5 A B 484 49.619 -74.269 -35.093 1.00 54.97 C
ATOM 18 C6 A B 484 48.463 -74.918 -34.614 1.00 55.86 C
ATOM 19 N6 A B 484 47.279 -74.896 -35.235 1.00 56.88 N
ATOM 20 N1 A B 484 48.570 -75.614 -33.465 1.00 54.44 N
ATOM 21 C2 A B 484 49.762 -75.663 -32.856 1.00 59.27 C
ATOM 22 N3 A B 484 50.922 -75.116 -33.214 1.00 53.05 N
ATOM 23 C4 A B 484 50.780 -74.426 -34.356 1.00 53.17 C
ATOM 24 P A B 485 55.886 -76.781 -37.026 1.00 40.98 P
ATOM 25 OP1 A B 485 57.321 -77.116 -36.890 1.00 52.87 O
ATOM 26 OP2 A B 485 55.178 -77.064 -38.306 1.00 42.09 O
ATOM 27 O5' A B 485 55.059 -77.459 -35.831 1.00 40.77 O
TER
ATOM 2 P G A 472 45.809 -71.755 -46.389 1.00 49.26 P
ATOM 3 OP1 G A 472 44.397 -71.366 -46.110 1.00 40.17 O
ATOM 4 OP2 G A 472 46.114 -72.849 -47.372 1.00 43.11 O
ATOM 5 O5' G A 472 46.672 -70.459 -46.748 1.00 47.25 O
ATOM 6 C5' G A 472 46.487 -69.224 -46.058 1.00 35.26 C
ATOM 7 C4' G A 472 47.040 -69.316 -44.655 1.00 41.90 C
ATOM 8 O4' G A 472 48.408 -69.812 -44.689 1.00 40.80 O
ATOM 9 C3' G A 472 47.078 -67.991 -43.891 1.00 43.74 C
ATOM 10 O3' G A 472 46.705 -68.220 -42.519 1.00 39.08 O
ATOM 11 C2' G A 472 48.550 -67.588 -44.011 1.00 46.68 C
ATOM 12 O2' G A 472 49.025 -66.726 -42.998 1.00 46.48 O
ATOM 13 C1' G A 472 49.226 -68.950 -43.932 1.00 44.60 C
ATOM 14 N9 G A 472 50.609 -69.015 -44.397 1.00 43.21 N
ATOM 15 C8 G A 472 51.095 -68.842 -45.672 1.00 40.47 C
ATOM 16 N7 G A 472 52.397 -68.948 -45.741 1.00 44.90 N
ATOM 17 C5 G A 472 52.792 -69.207 -44.433 1.00 48.46 C
ATOM 18 C6 G A 472 54.094 -69.405 -43.874 1.00 51.57 C
ATOM 19 O6 G A 472 55.197 -69.395 -44.446 1.00 57.34 O
ATOM 20 N1 G A 472 54.030 -69.625 -42.499 1.00 52.64 N
ATOM 21 C2 G A 472 52.872 -69.649 -41.755 1.00 54.46 C
ATOM 22 N2 G A 472 53.016 -69.854 -40.433 1.00 49.24 N
ATOM 23 N3 G A 472 51.663 -69.475 -42.264 1.00 55.69 N
ATOM 24 C4 G A 472 51.698 -69.257 -43.596 1.00 48.73 C
ATOM 25 P U A 473 46.052 -67.027 -41.642 1.00 48.19 P
ATOM 26 OP1 U A 473 45.201 -66.150 -42.515 1.00 39.51 O
ATOM 27 OP2 U A 473 47.131 -66.415 -40.819 1.00 45.89 O
ATOM 28 O5' U A 473 45.095 -67.793 -40.617 1.00 48.51 O
TER
ATOM 1 O3' G B 483 56.049 -70.521 -37.737 1.00 36.11 O
ATOM 2 P A B 484 56.165 -71.460 -39.029 1.00 40.33 P
ATOM 3 OP1 A B 484 57.505 -72.091 -38.986 1.00 48.78 O
ATOM 4 OP2 A B 484 55.735 -70.720 -40.251 1.00 40.79 O
ATOM 5 O5' A B 484 55.089 -72.601 -38.774 1.00 41.54 O
ATOM 6 C5' A B 484 54.117 -72.449 -37.760 1.00 44.62 C
ATOM 7 C4' A B 484 54.581 -73.084 -36.472 1.00 44.99 C
ATOM 8 O4' A B 484 53.729 -72.586 -35.422 1.00 50.61 O
ATOM 9 C3' A B 484 54.479 -74.607 -36.455 1.00 47.62 C
ATOM 10 O3' A B 484 55.760 -75.207 -36.746 1.00 47.00 O
ATOM 11 C2' A B 484 53.998 -74.913 -35.039 1.00 49.54 C
ATOM 12 O2' A B 484 55.060 -75.071 -34.122 1.00 52.86 O
ATOM 13 C1' A B 484 53.179 -73.662 -34.698 1.00 55.79 C
ATOM 14 N9 A B 484 51.756 -73.751 -35.044 1.00 54.81 N
ATOM 15 C8 A B 484 51.128 -73.193 -36.130 1.00 52.06 C
ATOM 16 N7 A B 484 49.853 -73.473 -36.205 1.00 54.73 N
ATOM 17 C5 A B 484 49.619 -74.269 -35.093 1.00 54.97 C
ATOM 18 C6 A B 484 48.463 -74.918 -34.614 1.00 55.86 C
ATOM 19 N6 A B 484 47.279 -74.896 -35.235 1.00 56.88 N
ATOM 20 N1 A B 484 48.570 -75.614 -33.465 1.00 54.44 N
ATOM 21 C2 A B 484 49.762 -75.663 -32.856 1.00 59.27 C
ATOM 22 N3 A B 484 50.922 -75.116 -33.214 1.00 53.05 N
ATOM 23 C4 A B 484 50.780 -74.426 -34.356 1.00 53.17 C
ATOM 24 P A B 485 55.886 -76.781 -37.026 1.00 40.98 P
ATOM 25 OP1 A B 485 57.321 -77.116 -36.890 1.00 52.87 O
ATOM 26 OP2 A B 485 55.178 -77.064 -38.306 1.00 42.09 O
ATOM 27 O5' A B 485 55.059 -77.459 -35.831 1.00 40.77 O
TER
Atoms:
OP1: (44.397,-71.366,-46.110)
OP2: (46.114,-72.849,-47.372)
C3': (47.078,-67.991,-43.891)
C1': (49.226,-68.950,-43.932)
C5': (46.487,-69.224,-46.058)
O6: (55.197,-69.395,-44.446)
O4': (48.408,-69.812,-44.689)
C8: (51.095,-68.842,-45.672)
C2: (52.872,-69.649,-41.755)
C6: (54.094,-69.405,-43.874)
C5: (52.792,-69.207,-44.433)
C4: (51.698,-69.257,-43.596)
P: (45.809,-71.755,-46.389)
C4': (47.040,-69.316,-44.655)
C2': (48.550,-67.588,-44.011)
O2': (49.025,-66.726,-42.998)
N1: (54.030,-69.625,-42.499)
N2: (53.016,-69.854,-40.433)
N3: (51.663,-69.475,-42.264)
N7: (52.397,-68.948,-45.741)
N9: (50.609,-69.015,-44.397)
O5': (46.672,-70.459,-46.748)
O3': (46.705,-68.220,-42.519)
OP2: (46.114,-72.849,-47.372)
C3': (47.078,-67.991,-43.891)
C1': (49.226,-68.950,-43.932)
C5': (46.487,-69.224,-46.058)
O6: (55.197,-69.395,-44.446)
O4': (48.408,-69.812,-44.689)
C8: (51.095,-68.842,-45.672)
C2: (52.872,-69.649,-41.755)
C6: (54.094,-69.405,-43.874)
C5: (52.792,-69.207,-44.433)
C4: (51.698,-69.257,-43.596)
P: (45.809,-71.755,-46.389)
C4': (47.040,-69.316,-44.655)
C2': (48.550,-67.588,-44.011)
O2': (49.025,-66.726,-42.998)
N1: (54.030,-69.625,-42.499)
N2: (53.016,-69.854,-40.433)
N3: (51.663,-69.475,-42.264)
N7: (52.397,-68.948,-45.741)
N9: (50.609,-69.015,-44.397)
O5': (46.672,-70.459,-46.748)
O3': (46.705,-68.220,-42.519)
OP1: (57.505,-72.091,-38.986)
OP2: (55.735,-70.720,-40.251)
C3': (54.479,-74.607,-36.455)
C1': (53.179,-73.662,-34.698)
C5': (54.117,-72.449,-37.760)
O4': (53.729,-72.586,-35.422)
C8: (51.128,-73.193,-36.130)
O2': (55.060,-75.071,-34.122)
C6: (48.463,-74.918,-34.614)
C5: (49.619,-74.269,-35.093)
C4: (50.780,-74.426,-34.356)
P: (56.165,-71.460,-39.029)
C4': (54.581,-73.084,-36.472)
C2': (53.998,-74.913,-35.039)
C2: (49.762,-75.663,-32.856)
N1: (48.570,-75.614,-33.465)
N3: (50.922,-75.116,-33.214)
N6: (47.279,-74.896,-35.235)
N7: (49.853,-73.473,-36.205)
N9: (51.756,-73.751,-35.044)
O5': (55.089,-72.601,-38.774)
O3': (55.760,-75.207,-36.746)
OP2: (55.735,-70.720,-40.251)
C3': (54.479,-74.607,-36.455)
C1': (53.179,-73.662,-34.698)
C5': (54.117,-72.449,-37.760)
O4': (53.729,-72.586,-35.422)
C8: (51.128,-73.193,-36.130)
O2': (55.060,-75.071,-34.122)
C6: (48.463,-74.918,-34.614)
C5: (49.619,-74.269,-35.093)
C4: (50.780,-74.426,-34.356)
P: (56.165,-71.460,-39.029)
C4': (54.581,-73.084,-36.472)
C2': (53.998,-74.913,-35.039)
C2: (49.762,-75.663,-32.856)
N1: (48.570,-75.614,-33.465)
N3: (50.922,-75.116,-33.214)
N6: (47.279,-74.896,-35.235)
N7: (49.853,-73.473,-36.205)
N9: (51.756,-73.751,-35.044)
O5': (55.089,-72.601,-38.774)
O3': (55.760,-75.207,-36.746)
Image (generated by PyMOL):