ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CCS:0257:0229

Extra

PDB:
ATOM 1 O3' U A 256 80.086 107.981 -4.466 1.00 62.88 O
ATOM 2 P G A 257 78.915 107.432 -3.511 1.00 64.65 P
ATOM 3 OP1 G A 257 78.220 106.352 -4.253 1.00 66.15 O
ATOM 4 OP2 G A 257 78.128 108.569 -2.970 1.00 66.82 O
ATOM 5 O5' G A 257 79.698 106.758 -2.308 1.00 64.23 O
ATOM 6 C5' G A 257 80.370 105.509 -2.485 1.00 64.05 C
ATOM 7 C4' G A 257 80.853 105.016 -1.155 1.00 64.17 C
ATOM 8 O4' G A 257 81.908 105.891 -0.675 1.00 63.33 O
ATOM 9 C3' G A 257 79.776 105.071 -0.090 1.00 63.41 C
ATOM 10 O3' G A 257 79.000 103.882 -0.121 1.00 66.35 O
ATOM 11 C2' G A 257 80.586 105.244 1.184 1.00 62.29 C
ATOM 12 O2' G A 257 81.133 104.017 1.622 1.00 62.48 O
ATOM 13 C1' G A 257 81.708 106.170 0.696 1.00 60.24 C
ATOM 14 N9 G A 257 81.397 107.592 0.797 1.00 55.39 N
ATOM 15 C8 G A 257 80.327 108.244 0.237 1.00 53.30 C
ATOM 16 N7 G A 257 80.312 109.522 0.500 1.00 52.73 N
ATOM 17 C5 G A 257 81.439 109.725 1.282 1.00 51.18 C
ATOM 18 C6 G A 257 81.942 110.906 1.871 1.00 49.75 C
ATOM 19 O6 G A 257 81.467 112.043 1.832 1.00 48.56 O
ATOM 20 N1 G A 257 83.121 110.668 2.569 1.00 48.72 N
ATOM 21 C2 G A 257 83.732 109.444 2.693 1.00 49.54 C
ATOM 22 N2 G A 257 84.860 109.408 3.410 1.00 47.93 N
ATOM 23 N3 G A 257 83.266 108.332 2.155 1.00 51.14 N
ATOM 24 C4 G A 257 82.124 108.545 1.469 1.00 52.54 C
ATOM 25 P U A 258 77.596 103.830 0.646 1.00 69.07 P
ATOM 26 OP1 U A 258 76.943 102.550 0.291 1.00 68.90 O
ATOM 27 OP2 U A 258 76.878 105.108 0.396 1.00 69.19 O
ATOM 28 O5' U A 258 78.028 103.742 2.177 1.00 69.89 O
TER

ATOM 1 O3' C B 228 83.835 113.098 6.270 1.00 61.11 O
ATOM 2 P A B 229 85.099 112.808 5.323 1.00 62.36 P
ATOM 3 OP1 A B 229 85.771 114.112 5.103 1.00 61.33 O
ATOM 4 OP2 A B 229 84.643 112.015 4.154 1.00 62.68 O
ATOM 5 O5' A B 229 86.045 111.898 6.222 1.00 61.04 O
ATOM 6 C5' A B 229 86.583 112.401 7.452 1.00 59.68 C
ATOM 7 C4' A B 229 87.320 111.312 8.193 1.00 58.49 C
ATOM 8 O4' A B 229 86.387 110.345 8.725 1.00 57.47 O
ATOM 9 C3' A B 229 88.217 110.440 7.345 1.00 58.54 C
ATOM 10 O3' A B 229 89.421 111.097 7.006 1.00 59.79 O
ATOM 11 C2' A B 229 88.436 109.238 8.252 1.00 58.14 C
ATOM 12 O2' A B 229 89.415 109.465 9.244 1.00 57.60 O
ATOM 13 C1' A B 229 87.064 109.114 8.917 1.00 58.19 C
ATOM 14 N9 A B 229 86.243 108.032 8.373 1.00 58.13 N
ATOM 15 C8 A B 229 85.218 108.095 7.460 1.00 58.09 C
ATOM 16 N7 A B 229 84.679 106.932 7.190 1.00 57.84 N
ATOM 17 C5 A B 229 85.403 106.041 7.973 1.00 58.04 C
ATOM 18 C6 A B 229 85.328 104.647 8.139 1.00 58.92 C
ATOM 19 N6 A B 229 84.458 103.867 7.491 1.00 59.10 N
ATOM 20 N1 A B 229 86.193 104.072 9.006 1.00 59.29 N
ATOM 21 C2 A B 229 87.072 104.850 9.649 1.00 57.81 C
ATOM 22 N3 A B 229 87.244 106.164 9.570 1.00 57.63 N
ATOM 23 C4 A B 229 86.368 106.706 8.706 1.00 57.60 C
ATOM 24 P A B 230 89.868 111.154 5.471 1.00 60.66 P
ATOM 25 OP1 A B 230 91.087 112.001 5.380 1.00 59.78 O
ATOM 26 OP2 A B 230 88.666 111.504 4.672 1.00 58.58 O
ATOM 27 O5' A B 230 90.256 109.644 5.156 1.00 59.15 O
TER

Atoms:
OP1: (78.220,106.352,-4.253)
OP2: (78.128,108.569,-2.970)
C3': (79.776,105.071,-0.090)
C1': (81.708,106.170,0.696)
C5': (80.370,105.509,-2.485)
O6: (81.467,112.043,1.832)
O4': (81.908,105.891,-0.675)
C8: (80.327,108.244,0.237)
C2: (83.732,109.444,2.693)
C6: (81.942,110.906,1.871)
C5: (81.439,109.725,1.282)
C4: (82.124,108.545,1.469)
P: (78.915,107.432,-3.511)
C4': (80.853,105.016,-1.155)
C2': (80.586,105.244,1.184)
O2': (81.133,104.017,1.622)
N1: (83.121,110.668,2.569)
N2: (84.860,109.408,3.410)
N3: (83.266,108.332,2.155)
N7: (80.312,109.522,0.500)
N9: (81.397,107.592,0.797)
O5': (79.698,106.758,-2.308)
O3': (79.000,103.882,-0.121)
OP1: (85.771,114.112,5.103)
OP2: (84.643,112.015,4.154)
C3': (88.217,110.440,7.345)
C1': (87.064,109.114,8.917)
C5': (86.583,112.401,7.452)
O4': (86.387,110.345,8.725)
C8: (85.218,108.095,7.460)
O2': (89.415,109.465,9.244)
C6: (85.328,104.647,8.139)
C5: (85.403,106.041,7.973)
C4: (86.368,106.706,8.706)
P: (85.099,112.808,5.323)
C4': (87.320,111.312,8.193)
C2': (88.436,109.238,8.252)
C2: (87.072,104.850,9.649)
N1: (86.193,104.072,9.006)
N3: (87.244,106.164,9.570)
N6: (84.458,103.867,7.491)
N7: (84.679,106.932,7.190)
N9: (86.243,108.032,8.373)
O5': (86.045,111.898,6.222)
O3': (89.421,111.097,7.006)
Image (generated by PyMOL):
PyMOL image
show in jmol