Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ9:02016:02020
Extra
PDB:
ATOM 1 O3' U A2015 42.381 107.765 109.839 1.00 31.36 O
ATOM 2 P G A2016 43.570 107.064 109.016 1.00 33.17 P
ATOM 3 OP1 G A2016 43.171 105.644 108.775 1.00 32.65 O
ATOM 4 OP2 G A2016 44.863 107.347 109.720 1.00 35.33 O
ATOM 5 O5' G A2016 43.562 107.844 107.620 1.00 32.89 O
ATOM 6 C5' G A2016 42.489 107.675 106.673 1.00 31.21 C
ATOM 7 C4' G A2016 42.664 108.624 105.504 1.00 33.13 C
ATOM 8 O4' G A2016 42.564 109.999 105.958 1.00 35.07 O
ATOM 9 C3' G A2016 44.009 108.561 104.808 1.00 33.90 C
ATOM 10 O3' G A2016 44.014 107.497 103.871 1.00 36.38 O
ATOM 11 C2' G A2016 44.107 109.932 104.147 1.00 34.01 C
ATOM 12 O2' G A2016 43.396 110.048 102.934 1.00 34.96 O
ATOM 13 C1' G A2016 43.440 110.821 105.199 1.00 34.73 C
ATOM 14 N9 G A2016 44.400 111.445 106.108 1.00 34.87 N
ATOM 15 C8 G A2016 44.921 110.907 107.260 1.00 35.01 C
ATOM 16 N7 G A2016 45.782 111.693 107.850 1.00 35.89 N
ATOM 17 C5 G A2016 45.835 112.817 107.038 1.00 33.53 C
ATOM 18 C6 G A2016 46.603 113.992 107.159 1.00 33.18 C
ATOM 19 O6 G A2016 47.437 114.278 108.021 1.00 35.37 O
ATOM 20 N1 G A2016 46.332 114.888 106.135 1.00 31.81 N
ATOM 21 C2 G A2016 45.442 114.674 105.119 1.00 31.22 C
ATOM 22 N2 G A2016 45.295 115.670 104.250 1.00 32.66 N
ATOM 23 N3 G A2016 44.740 113.570 104.973 1.00 32.24 N
ATOM 24 C4 G A2016 44.980 112.689 105.967 1.00 34.11 C
ATOM 25 P C A2017 45.315 106.560 103.727 1.00 38.99 P
ATOM 26 OP1 C A2017 44.894 105.467 102.814 1.00 34.96 O
ATOM 27 OP2 C A2017 45.829 106.214 105.093 1.00 36.17 O
ATOM 28 O5' C A2017 46.364 107.511 102.982 1.00 36.32 O
TER
ATOM 1 O3' G B2019 49.881 117.802 105.514 1.00 34.43 O
ATOM 2 P A B2020 48.337 117.752 105.098 1.00 34.31 P
ATOM 3 OP1 A B2020 47.619 117.257 106.306 1.00 34.80 O
ATOM 4 OP2 A B2020 48.236 117.007 103.808 1.00 32.04 O
ATOM 5 O5' A B2020 47.931 119.263 104.847 1.00 31.05 O
ATOM 6 C5' A B2020 47.396 120.048 105.898 1.00 30.75 C
ATOM 7 C4' A B2020 46.090 120.628 105.462 1.00 31.89 C
ATOM 8 O4' A B2020 45.202 119.543 105.095 1.00 32.38 O
ATOM 9 C3' A B2020 45.353 121.437 106.512 1.00 33.51 C
ATOM 10 O3' A B2020 44.598 122.423 105.820 1.00 39.09 O
ATOM 11 C2' A B2020 44.410 120.405 107.115 1.00 32.26 C
ATOM 12 O2' A B2020 43.273 121.004 107.703 1.00 35.22 O
ATOM 13 C1' A B2020 44.020 119.620 105.866 1.00 31.85 C
ATOM 14 N9 A B2020 43.509 118.262 106.060 1.00 30.85 N
ATOM 15 C8 A B2020 43.899 117.308 106.957 1.00 29.43 C
ATOM 16 N7 A B2020 43.256 116.172 106.834 1.00 31.23 N
ATOM 17 C5 A B2020 42.369 116.401 105.791 1.00 31.25 C
ATOM 18 C6 A B2020 41.400 115.582 105.157 1.00 31.98 C
ATOM 19 N6 A B2020 41.113 114.326 105.530 1.00 30.72 N
ATOM 20 N1 A B2020 40.716 116.112 104.121 1.00 31.50 N
ATOM 21 C2 A B2020 40.966 117.375 103.770 1.00 31.05 C
ATOM 22 N3 A B2020 41.830 118.243 104.295 1.00 32.10 N
ATOM 23 C4 A B2020 42.512 117.684 105.309 1.00 31.31 C
ATOM 24 P G B2021 45.197 123.903 105.621 1.00 41.95 P
ATOM 25 OP1 G B2021 45.556 124.034 104.179 1.00 42.55 O
ATOM 26 OP2 G B2021 46.225 124.176 106.671 1.00 40.65 O
ATOM 27 O5' G B2021 43.943 124.833 105.925 1.00 38.90 O
TER
ATOM 2 P G A2016 43.570 107.064 109.016 1.00 33.17 P
ATOM 3 OP1 G A2016 43.171 105.644 108.775 1.00 32.65 O
ATOM 4 OP2 G A2016 44.863 107.347 109.720 1.00 35.33 O
ATOM 5 O5' G A2016 43.562 107.844 107.620 1.00 32.89 O
ATOM 6 C5' G A2016 42.489 107.675 106.673 1.00 31.21 C
ATOM 7 C4' G A2016 42.664 108.624 105.504 1.00 33.13 C
ATOM 8 O4' G A2016 42.564 109.999 105.958 1.00 35.07 O
ATOM 9 C3' G A2016 44.009 108.561 104.808 1.00 33.90 C
ATOM 10 O3' G A2016 44.014 107.497 103.871 1.00 36.38 O
ATOM 11 C2' G A2016 44.107 109.932 104.147 1.00 34.01 C
ATOM 12 O2' G A2016 43.396 110.048 102.934 1.00 34.96 O
ATOM 13 C1' G A2016 43.440 110.821 105.199 1.00 34.73 C
ATOM 14 N9 G A2016 44.400 111.445 106.108 1.00 34.87 N
ATOM 15 C8 G A2016 44.921 110.907 107.260 1.00 35.01 C
ATOM 16 N7 G A2016 45.782 111.693 107.850 1.00 35.89 N
ATOM 17 C5 G A2016 45.835 112.817 107.038 1.00 33.53 C
ATOM 18 C6 G A2016 46.603 113.992 107.159 1.00 33.18 C
ATOM 19 O6 G A2016 47.437 114.278 108.021 1.00 35.37 O
ATOM 20 N1 G A2016 46.332 114.888 106.135 1.00 31.81 N
ATOM 21 C2 G A2016 45.442 114.674 105.119 1.00 31.22 C
ATOM 22 N2 G A2016 45.295 115.670 104.250 1.00 32.66 N
ATOM 23 N3 G A2016 44.740 113.570 104.973 1.00 32.24 N
ATOM 24 C4 G A2016 44.980 112.689 105.967 1.00 34.11 C
ATOM 25 P C A2017 45.315 106.560 103.727 1.00 38.99 P
ATOM 26 OP1 C A2017 44.894 105.467 102.814 1.00 34.96 O
ATOM 27 OP2 C A2017 45.829 106.214 105.093 1.00 36.17 O
ATOM 28 O5' C A2017 46.364 107.511 102.982 1.00 36.32 O
TER
ATOM 1 O3' G B2019 49.881 117.802 105.514 1.00 34.43 O
ATOM 2 P A B2020 48.337 117.752 105.098 1.00 34.31 P
ATOM 3 OP1 A B2020 47.619 117.257 106.306 1.00 34.80 O
ATOM 4 OP2 A B2020 48.236 117.007 103.808 1.00 32.04 O
ATOM 5 O5' A B2020 47.931 119.263 104.847 1.00 31.05 O
ATOM 6 C5' A B2020 47.396 120.048 105.898 1.00 30.75 C
ATOM 7 C4' A B2020 46.090 120.628 105.462 1.00 31.89 C
ATOM 8 O4' A B2020 45.202 119.543 105.095 1.00 32.38 O
ATOM 9 C3' A B2020 45.353 121.437 106.512 1.00 33.51 C
ATOM 10 O3' A B2020 44.598 122.423 105.820 1.00 39.09 O
ATOM 11 C2' A B2020 44.410 120.405 107.115 1.00 32.26 C
ATOM 12 O2' A B2020 43.273 121.004 107.703 1.00 35.22 O
ATOM 13 C1' A B2020 44.020 119.620 105.866 1.00 31.85 C
ATOM 14 N9 A B2020 43.509 118.262 106.060 1.00 30.85 N
ATOM 15 C8 A B2020 43.899 117.308 106.957 1.00 29.43 C
ATOM 16 N7 A B2020 43.256 116.172 106.834 1.00 31.23 N
ATOM 17 C5 A B2020 42.369 116.401 105.791 1.00 31.25 C
ATOM 18 C6 A B2020 41.400 115.582 105.157 1.00 31.98 C
ATOM 19 N6 A B2020 41.113 114.326 105.530 1.00 30.72 N
ATOM 20 N1 A B2020 40.716 116.112 104.121 1.00 31.50 N
ATOM 21 C2 A B2020 40.966 117.375 103.770 1.00 31.05 C
ATOM 22 N3 A B2020 41.830 118.243 104.295 1.00 32.10 N
ATOM 23 C4 A B2020 42.512 117.684 105.309 1.00 31.31 C
ATOM 24 P G B2021 45.197 123.903 105.621 1.00 41.95 P
ATOM 25 OP1 G B2021 45.556 124.034 104.179 1.00 42.55 O
ATOM 26 OP2 G B2021 46.225 124.176 106.671 1.00 40.65 O
ATOM 27 O5' G B2021 43.943 124.833 105.925 1.00 38.90 O
TER
Atoms:
OP1: (43.171,105.644,108.775)
OP2: (44.863,107.347,109.720)
C3': (44.009,108.561,104.808)
C1': (43.440,110.821,105.199)
C5': (42.489,107.675,106.673)
O6: (47.437,114.278,108.021)
O4': (42.564,109.999,105.958)
C8: (44.921,110.907,107.260)
C2: (45.442,114.674,105.119)
C6: (46.603,113.992,107.159)
C5: (45.835,112.817,107.038)
C4: (44.980,112.689,105.967)
P: (43.570,107.064,109.016)
C4': (42.664,108.624,105.504)
C2': (44.107,109.932,104.147)
O2': (43.396,110.048,102.934)
N1: (46.332,114.888,106.135)
N2: (45.295,115.670,104.250)
N3: (44.740,113.570,104.973)
N7: (45.782,111.693,107.850)
N9: (44.400,111.445,106.108)
O5': (43.562,107.844,107.620)
O3': (44.014,107.497,103.871)
OP2: (44.863,107.347,109.720)
C3': (44.009,108.561,104.808)
C1': (43.440,110.821,105.199)
C5': (42.489,107.675,106.673)
O6: (47.437,114.278,108.021)
O4': (42.564,109.999,105.958)
C8: (44.921,110.907,107.260)
C2: (45.442,114.674,105.119)
C6: (46.603,113.992,107.159)
C5: (45.835,112.817,107.038)
C4: (44.980,112.689,105.967)
P: (43.570,107.064,109.016)
C4': (42.664,108.624,105.504)
C2': (44.107,109.932,104.147)
O2': (43.396,110.048,102.934)
N1: (46.332,114.888,106.135)
N2: (45.295,115.670,104.250)
N3: (44.740,113.570,104.973)
N7: (45.782,111.693,107.850)
N9: (44.400,111.445,106.108)
O5': (43.562,107.844,107.620)
O3': (44.014,107.497,103.871)
OP1: (47.619,117.257,106.306)
OP2: (48.236,117.007,103.808)
C3': (45.353,121.437,106.512)
C1': (44.020,119.620,105.866)
C5': (47.396,120.048,105.898)
O4': (45.202,119.543,105.095)
C8: (43.899,117.308,106.957)
O2': (43.273,121.004,107.703)
C6: (41.400,115.582,105.157)
C5: (42.369,116.401,105.791)
C4: (42.512,117.684,105.309)
P: (48.337,117.752,105.098)
C4': (46.090,120.628,105.462)
C2': (44.410,120.405,107.115)
C2: (40.966,117.375,103.770)
N1: (40.716,116.112,104.121)
N3: (41.830,118.243,104.295)
N6: (41.113,114.326,105.530)
N7: (43.256,116.172,106.834)
N9: (43.509,118.262,106.060)
O5': (47.931,119.263,104.847)
O3': (44.598,122.423,105.820)
OP2: (48.236,117.007,103.808)
C3': (45.353,121.437,106.512)
C1': (44.020,119.620,105.866)
C5': (47.396,120.048,105.898)
O4': (45.202,119.543,105.095)
C8: (43.899,117.308,106.957)
O2': (43.273,121.004,107.703)
C6: (41.400,115.582,105.157)
C5: (42.369,116.401,105.791)
C4: (42.512,117.684,105.309)
P: (48.337,117.752,105.098)
C4': (46.090,120.628,105.462)
C2': (44.410,120.405,107.115)
C2: (40.966,117.375,103.770)
N1: (40.716,116.112,104.121)
N3: (41.830,118.243,104.295)
N6: (41.113,114.326,105.530)
N7: (43.256,116.172,106.834)
N9: (43.509,118.262,106.060)
O5': (47.931,119.263,104.847)
O3': (44.598,122.423,105.820)
Image (generated by PyMOL):